FFCP PHASE1:Hg19::chr14:93397768..93397779,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1113 | |EntrezGene=1113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1929 | |HGNC=1929 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-242bp_to_ENST00000556876_5end | |association_with_transcript=-242bp_to_ENST00000556876_5end | ||
|cluster_id=chr14:93397768..93397779,+ | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_4_at_CHGA_5end | |description=CAGE_peak_4_at_CHGA_5end |
Latest revision as of 15:40, 16 September 2015
Short description: | p4@CHGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHGA_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | -242bp_to_ENST00000556876_5end |
EntrezGene: | CHGA |
HGNC: | 1929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CHGA |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.44e-17 | 2 |
keratinocyte | 1.83e-07 | 5 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
small intestine | 6.23e-26 | 4 |
occipital lobe | 7.55e-26 | 5 |
neocortex | 4.08e-23 | 20 |
regional part of cerebral cortex | 5.09e-21 | 22 |
cerebral cortex | 1.77e-18 | 25 |
pallium | 1.77e-18 | 25 |
regional part of telencephalon | 2.41e-14 | 32 |
cerebral hemisphere | 2.41e-14 | 32 |
brain | 3.65e-14 | 68 |
future brain | 3.65e-14 | 68 |
Showing 1 to 10 of 42 entries