FFCP PHASE1:Mm9::chr12:48935035..48935049,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:48935035..48935049,+
|short_description=p@chr12:48935035..48935049,+
|description=CAGE_peak_at_chr12:48935035..48935049,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=80 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:48935035..48935049,+ | |||
|description=CAGE_peak_at_chr12:48935035..48935049,+ | |||
|id=chr12:48935035..48935049,+ | |||
|ontology_enrichment_celltype=CL:0000553!9.08e-10!6;CL:0000556!9.08e-10!6;CL:0000414!1.86e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.98e-47,6;CL:0000556,1.98e-47,6;CL:0000050,1.19e-31,9;CL:0002027,7.81e-25,3;CL:0002006,7.81e-25,3;CL:0002024,7.81e-25,3;CL:0000839,6.49e-22,13;CL:0000763,8.53e-18,16;CL:0000049,5.69e-15,19;CL:0002031,2.41e-11,25;CL:0000213,1.44e-09,1;CL:0002078,1.44e-09,1;CL:0000115,1.44e-09,1;CL:0002262,1.44e-09,1;CL:1000398,1.44e-09,1;CL:0000988,8.04e-09,32;CL:0002032,8.04e-09,32;CL:0000037,8.04e-09,32;CL:0000837,8.04e-09,32;CL:0002320,3.46e-08,46;CL:0000134,3.46e-08,46;CL:0000219,6.59e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.53e-18,16;UBERON:0001474,1.45e-17,22;UBERON:0004765,1.45e-17,22;UBERON:0001434,1.45e-17,22;UBERON:0002204,1.73e-15,32;UBERON:0002394,1.44e-09,1;UBERON:0001281,1.44e-09,1;UBERON:0000353,1.44e-09,1;UBERON:0003497,1.44e-09,1;UBERON:0003909,1.44e-09,1;UBERON:0003928,1.44e-09,1;UBERON:0003835,1.44e-09,1;UBERON:0003513,1.44e-09,1;UBERON:0001280,1.44e-09,1;UBERON:0004647,1.44e-09,1;UBERON:0002294,1.44e-09,1;UBERON:0001173,1.44e-09,1;UBERON:0004912,1.44e-09,1;UBERON:0005171,1.44e-09,1;UBERON:0002384,3.46e-08,46;UBERON:0003081,8.11e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0,0.558405112967355,0,0.174840804837995,1.66554880907831,8.90891176515234,1.39912375625629,1.41957974411207,1.50825876966313,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,2.6087803983151,0,0,0,0,0.896053774194671,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,10.1823803158397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.700592054203017,0.16455984991348,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304827226619999,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,2.02506750069542,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0,0.558405112967355,0,0.174840804837995,1.66554880907831,8.90891176515234,1.39912375625629,1.41957974411207,1.50825876966313,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,2.6087803983151,0,0,0,0,0.896053774194671,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,10.1823803158397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.700592054203017,0.16455984991348,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304827226619999,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0,2.02506750069542,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr12:48935035..48935049,+ | |||
}} | }} |
Latest revision as of 01:50, 5 August 2015
Short description: | p@chr12:48935035..48935049, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:48935035..48935049, + |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.98e-47 | 6 |
megakaryocyte | 1.98e-47 | 6 |
megakaryocyte-erythroid progenitor cell | 1.19e-31 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.81e-25 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.81e-25 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.81e-25 | 3 |
myeloid lineage restricted progenitor cell | 6.49e-22 | 13 |
myeloid cell | 8.53e-18 | 16 |
common myeloid progenitor | 5.69e-15 | 19 |
hematopoietic lineage restricted progenitor cell | 2.41e-11 | 25 |
lining cell | 1.44e-09 | 1 |
meso-epithelial cell | 1.44e-09 | 1 |
endothelial cell | 1.44e-09 | 1 |
endothelial cell of sinusoid | 1.44e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.44e-09 | 1 |
hematopoietic cell | 8.04e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.04e-09 | 32 |
hematopoietic stem cell | 8.04e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.04e-09 | 32 |
connective tissue cell | 3.46e-08 | 46 |
mesenchymal cell | 3.46e-08 | 46 |
motile cell | 6.59e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.53e-18 | 16 |
bone element | 1.45e-17 | 22 |
skeletal element | 1.45e-17 | 22 |
skeletal system | 1.45e-17 | 22 |
musculoskeletal system | 1.73e-15 | 32 |
bile duct | 1.44e-09 | 1 |
hepatic sinusoid | 1.44e-09 | 1 |
parenchyma | 1.44e-09 | 1 |
abdomen blood vessel | 1.44e-09 | 1 |
sinusoid | 1.44e-09 | 1 |
digestive system duct | 1.44e-09 | 1 |
abdominal segment blood vessel | 1.44e-09 | 1 |
trunk blood vessel | 1.44e-09 | 1 |
liver parenchyma | 1.44e-09 | 1 |
liver lobule | 1.44e-09 | 1 |
biliary system | 1.44e-09 | 1 |
biliary tree | 1.44e-09 | 1 |
biliary bud | 1.44e-09 | 1 |
hepatic duct | 1.44e-09 | 1 |
connective tissue | 3.46e-08 | 46 |
lateral plate mesoderm | 8.11e-07 | 87 |