FFCP PHASE1:Mm9::chr14:52936049..52936057,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52936049..52936057,-
|short_description=p6@Sall2
|description=CAGE_peak_6_at_Sall2_5end
|association_with_transcript=-51bp_to_ENSMUST00000135523,NM_001244...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50524 | |EntrezGene=50524 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F7ARK3,E9Q3Q0 | |UniProt=F7ARK3,E9Q3Q0 | ||
|association_with_transcript=-51bp_to_ENSMUST00000135523,NM_001244916_5end | |||
|cluster_id=chr14:52936049..52936057,- | |||
|description=CAGE_peak_6_at_Sall2_5end | |||
|id=chr14:52936049..52936057,- | |||
|ontology_enrichment_celltype=CL:0000221!3.94e-13!44;CL:0000133!3.94e-13!44;CL:0000540!7.89e-13!33;CL:0000047!7.89e-13!33;CL:0000031!7.89e-13!33;CL:0000404!7.89e-13!33;CL:0002319!1.05e-12!43;CL:0000055!6.86e-12!50;CL:0000393!3.18e-11!39;CL:0000211!3.18e-11!39;CL:0000117!2.59e-10!23;CL:0000337!2.59e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-18,23;CL:0000337,3.76e-18,23;CL:0002319,1.67e-17,43;CL:0000540,2.69e-17,33;CL:0000047,2.69e-17,33;CL:0000031,2.69e-17,33;CL:0000404,2.69e-17,33;CL:0000221,5.49e-17,44;CL:0000133,5.49e-17,44;CL:0000393,6.01e-14,39;CL:0000211,6.01e-14,39;CL:0002321,8.87e-09,70;CL:0002613,4.06e-08,3;CL:0000120,1.70e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.12e-14!102;UBERON:0000924!2.12e-14!102;UBERON:0006601!2.12e-14!102;UBERON:0001017!9.77e-14!73;UBERON:0005743!9.77e-14!73;UBERON:0000073!3.02e-13!75;UBERON:0001016!3.02e-13!75;UBERON:0002346!2.46e-12!71;UBERON:0003075!2.46e-12!71;UBERON:0007284!2.46e-12!71;UBERON:0000033!7.96e-10!63;UBERON:0000153!3.51e-09!94;UBERON:0001049!3.53e-08!52;UBERON:0005068!3.53e-08!52;UBERON:0006241!3.53e-08!52;UBERON:0007135!3.53e-08!52;UBERON:0007811!3.29e-07!86;UBERON:0003056!6.35e-07!49;UBERON:0000955!7.07e-07!50;UBERON:0006238!7.07e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.59e-14,73;UBERON:0001016,2.61e-13,75;UBERON:0004121,2.12e-12,95;UBERON:0000924,2.12e-12,95;UBERON:0006601,2.12e-12,95;UBERON:0002346,1.25e-08,64;UBERON:0003075,1.25e-08,64;UBERON:0007284,1.25e-08,64;UBERON:0000073,1.41e-08,54;UBERON:0010371,6.93e-08,73;UBERON:0002420,6.53e-07,8;UBERON:0007245,6.53e-07,8;UBERON:0010009,6.53e-07,8;UBERON:0010011,6.53e-07,8;UBERON:0000454,6.53e-07,8;UBERON:0001049,9.10e-07,52;UBERON:0005068,9.10e-07,52;UBERON:0006241,9.10e-07,52;UBERON:0007135,9.10e-07,52 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,1.56478268869608,0.65407546914134,0,0.777719596297134,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,3.03474691289397,1.05798195854407,3.1691570175309,0,1.77858959222228,0,0.988866362566974,0,1.19840044207362,1.53687322128622,0.518448061542388,0.540023753326763,1.47227472945967,1.14260393761521,1.10434270475807,0.979926393719632,1.53352753629178,0.919218786610021,0,1.78762273319263,1.22885226604995,3.16527090552465,3.29355516968675,1.56274011167028,1.11673199600552,0,1.22238598221448,1.17851434189467,0.996601765593721,0.745597783301202,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0,0.511290967734173,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0.254140454146129,1.04853447583376,0.457500602818626,0.628271760564322,0.173824320192276,0.767146371990992,0.83115217823824,0,0.407357455401265,0.124406970610093,0,0.210441855886474,1.56144531555244,0.919608417733892,0.900310649026746,0.30140963567143,0.680364991513279,1.15302348256365,0.843315521037559,1.55222022443409,1.94011193639558,0.567318240503458,0.879755620819744,1.7535658594206,1.11218899690239,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,1.03562886267751,0.703578179943289,0.180062061461015,0.710234206755631,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.823236899034275,0,0,1.70630600428187,1.62565670302307,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.379419222745544,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,1.40654023910644,0.163934945376675,0,0.94652465824877,0.390438744296638,1.72338718186239,0.955875191810208,0.891194696329576,0.566153061577665,0.404810701674894,1.46127928955656,0,0.642642632843614,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,1.21390318077491,0,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0,0,0,0,0.340439605753788,1.26042765821917,0.776152102696527,1.07168517515796,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.469343416127421,0.21183207086382,0,0.16488625294148,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.813277868507395,0.324016022465404,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.827292452285488,0.777804753376191,0.387479470433193,0.337912250981556,0.234714477291508,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.590758108698309,0.403865799792591,0.609654453239999,0.403304740547362,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0.221985953374065,0.358855426437903,0.335769232728157,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,1.5107877947794,0,0,0.453142408984205,0,1.55681021376265,1.19707462020309,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.402048282689293,1.90517476513229,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.233931608445408,0,0.382576664137687,0.220591419119515,0.231867835620421 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|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,1.56478268869608,0.65407546914134,0,0.777719596297134,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,3.03474691289397,1.05798195854407,3.1691570175309,0,1.77858959222228,0,0.988866362566974,0,1.19840044207362,1.53687322128622,0.518448061542388,0.540023753326763,1.47227472945967,1.14260393761521,1.10434270475807,0.979926393719632,1.53352753629178,0.919218786610021,0,1.78762273319263,1.22885226604995,3.16527090552465,3.29355516968675,1.56274011167028,1.11673199600552,0,1.22238598221448,1.17851434189467,0.996601765593721,0.745597783301202,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0,0.511290967734173,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0.254140454146129,1.04853447583376,0.457500602818626,0.628271760564322,0.173824320192276,0.767146371990992,0.83115217823824,0,0.407357455401265,0.124406970610093,0,0.210441855886474,1.56144531555244,0.919608417733892,0.900310649026746,0.30140963567143,0.680364991513279,1.15302348256365,0.843315521037559,1.55222022443409,1.94011193639558,0.567318240503458,0.879755620819744,1.7535658594206,1.11218899690239,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,1.03562886267751,0.703578179943289,0.180062061461015,0.710234206755631,0,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.823236899034275,0,0,1.70630600428187,1.62565670302307,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.379419222745544,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,1.40654023910644,0.163934945376675,0,0.94652465824877,0.390438744296638,1.72338718186239,0.955875191810208,0.891194696329576,0.566153061577665,0.404810701674894,1.46127928955656,0,0.642642632843614,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,1.21390318077491,0,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0,0,0,0,0.340439605753788,1.26042765821917,0.776152102696527,1.07168517515796,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.469343416127421,0.21183207086382,0,0.16488625294148,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.474503990371703,0.813277868507395,0.324016022465404,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.827292452285488,0.777804753376191,0.387479470433193,0.337912250981556,0.234714477291508,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.590758108698309,0.403865799792591,0.609654453239999,0.403304740547362,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0.221985953374065,0.358855426437903,0.335769232728157,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,1.5107877947794,0,0,0.453142408984205,0,1.55681021376265,1.19707462020309,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.402048282689293,1.90517476513229,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.233931608445408,0,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Sall2 | |||
}} | }} |
Latest revision as of 01:19, 26 September 2015
Short description: | p6@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sall2_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_ENSMUST00000135523, NM_001244916_5end |
EntrezGene: | Sall2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.76e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-18 | 23 |
neural cell | 1.67e-17 | 43 |
neuron | 2.69e-17 | 33 |
neuronal stem cell | 2.69e-17 | 33 |
neuroblast | 2.69e-17 | 33 |
electrically signaling cell | 2.69e-17 | 33 |
ectodermal cell | 5.49e-17 | 44 |
neurectodermal cell | 5.49e-17 | 44 |
electrically responsive cell | 6.01e-14 | 39 |
electrically active cell | 6.01e-14 | 39 |
embryonic cell | 8.87e-09 | 70 |
striatum neuron | 4.06e-08 | 3 |
granule cell | 1.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.59e-14 | 73 |
nervous system | 2.61e-13 | 75 |
ectoderm-derived structure | 2.12e-12 | 95 |
ectoderm | 2.12e-12 | 95 |
presumptive ectoderm | 2.12e-12 | 95 |
neurectoderm | 1.25e-08 | 64 |
neural plate | 1.25e-08 | 64 |
presumptive neural plate | 1.25e-08 | 64 |
regional part of nervous system | 1.41e-08 | 54 |
ecto-epithelium | 6.93e-08 | 73 |
basal ganglion | 6.53e-07 | 8 |
nuclear complex of neuraxis | 6.53e-07 | 8 |
aggregate regional part of brain | 6.53e-07 | 8 |
collection of basal ganglia | 6.53e-07 | 8 |
cerebral subcortex | 6.53e-07 | 8 |
neural tube | 9.10e-07 | 52 |
neural rod | 9.10e-07 | 52 |
future spinal cord | 9.10e-07 | 52 |
neural keel | 9.10e-07 | 52 |