FFCP PHASE1:Mm9::chr14:59820255..59820332,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:59820255..59820332,+
|short_description=p2@Rcbtb1
|description=CAGE_peak_2_at_Rcbtb1_5end
|association_with_transcript=0bp_to_ENSMUST00000095778,ENSMUST00...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71330 | |EntrezGene=71330 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000095778,ENSMUST00000140136_5end | |||
|cluster_id=chr14:59820255..59820332,+ | |||
|description=CAGE_peak_2_at_Rcbtb1_5end | |||
|id=chr14:59820255..59820332,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.12e-12!33;CL:0000047!2.12e-12!33;CL:0000031!2.12e-12!33;CL:0000404!2.12e-12!33;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39;CL:0002321!4.33e-10!70;CL:0000220!4.33e-10!70;CL:0000117!5.41e-09!23;CL:0000337!5.41e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.09e-12,33;CL:0000047,2.09e-12,33;CL:0000031,2.09e-12,33;CL:0000404,2.09e-12,33;CL:0000393,1.27e-11,39;CL:0000211,1.27e-11,39;CL:0002321,3.74e-10,70;CL:0000117,5.36e-09,23;CL:0000337,5.36e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.63e-08!73;UBERON:0005743!2.63e-08!73;UBERON:0002346!5.79e-08!71;UBERON:0003075!5.79e-08!71;UBERON:0007284!5.79e-08!71;UBERON:0000073!5.96e-08!75;UBERON:0001016!5.96e-08!75;UBERON:0003056!2.63e-07!49;UBERON:0000344!3.85e-07!15;UBERON:0000033!6.62e-07!63;UBERON:0000160!9.11e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.20e-09,31;UBERON:0002346,6.75e-09,64;UBERON:0003075,6.75e-09,64;UBERON:0007284,6.75e-09,64;UBERON:0001017,2.32e-08,73;UBERON:0001016,5.27e-08,75;UBERON:0011216,1.02e-07,194;UBERON:0003056,2.61e-07,49;UBERON:0000344,3.83e-07,15 | |||
|phase1_expression=5.60520964866779,13.2610654902957,14.1049764210756,20.5675663688644,23.5420993074783,11.4157904900085,12.1478573109673,4.77756296733832,0.84473233291,2.57470978954193,1.54096171402954,1.51567102091139,10.2720437958723,10.0533462781847,0.666219523631325,0.607425802169478,0.699561878128147,3.78554598429885,6.03303507865251,4.2438965179803,2.04103896362567,1.19149141441062,0.783599367416806,12.9593862462659,12.15869189656,16.6527269593356,17.230479846363,7.97243560937789,13.6816862008589,16.1299283046356,10.199603490144,3.17515336729816,2.46025915033828,0,4.04392267651784,6.31691652362271,5.71674197534634,0,0,0,0,0,0,5.66535680890098,7.40051597902456,9.72797786456912,0,1.52617609466313,1.31811709640683,3.11087838518853,3.77963338388479,2.87505128729943,2.68452169692378,5.80289713609076,5.37750078627942,2.57259436035947,6.01720223871389,4.64104883049698,10.5204559646991,8.46385566835253,6.97214543856797,3.72728985276045,4.4464739805557,2.2497492932035,0.988866362566974,2.8419204597844,1.19840044207362,0.384218305321555,18.664130215526,17.4157660447881,19.3498964443271,5.71301968807607,5.74258206474195,18.1286382838132,15.9103481890272,17.4651569455904,9.91042928994498,12.7687338085188,8.90917892886212,10.8146755938759,8.5083508550241,9.89735404057844,9.49222196604695,12.380777420697,9.62628960993904,6.18720029494702,5.97961059356232,10.8111678578674,3.93776205332557,4.30757892608677,8.69593466105033,7.74381489283248,7.47968467078526,8.63525106620507,5.84798775702902,17.0250217096988,4.91555470461132,5.28333999991979,3.11743205523443,4.24007489412408,5.21120653173718,8.98285341900225,5.09610479413291,7.11066703153331,3.030874574157,6.08063677140237,8.08839112023653,6.96521666286266,5.43769555659061,3.56261133755579,4.8575891494518,6.08930956624282,3.22861696158482,4.6724018571313,5.76184664964954,3.89566433121994,4.44950941921873,1.01219549843938,0.884610551949874,1.7794353494215,2.42925670306433,0.969750506270444,5.59175283654366,7.02673912827713,7.54008144528438,8.9409969323007,0.718890747035522,1.19980546198682,0.635351135365324,10.0359728401231,6.40500843946077,11.0575829859321,3.82413504423008,4.85859368927628,9.14267396062064,7.78758062725237,7.23059483337246,1.8661045591514,6.82351447770922,17.4666740385773,13.4024056251585,6.89706313300419,8.10279584124071,8.89158425230719,7.00775941258677,7.81493693737584,6.27801554550183,11.9003550539947,13.3652155618362,11.535470890237,13.5482365606241,8.98702502953057,7.78532297831674,5.2237824978325,2.67516777330327,12.9372273432021,0.702213187313235,0.772043721344145,0.852490498186778,5.38527008592305,4.69052119962192,4.8616756594474,5.20838418287463,2.16440654922144,2.77680803197281,0.930135779001631,2.14618721119695,2.56883753207773,1.81015834904829,0.656669856316381,0.891756905004413,1.60819986167866,1.3173006917463,1.74468344388483,5.46753866266731,11.3195073617213,16.8513579321737,5.28901133327089,11.9441420299731,11.3795969211615,7.08771037271513,6.6555563125703,8.45036566610507,5.89699440948933,11.3886974770683,7.90554982675252,8.54539709920916,6.96347652144028,7.01870713628832,6.29173586057955,10.3746263939853,12.1476176685164,6.63837653335786,8.79713547094912,5.63538678365402,5.09128319613286,6.40043207653165,7.78507600782536,3.41477300470989,2.65698266363284,1.56998727841375,3.94870924549762,7.41131567717872,3.17005700860579,4.52085688760367,2.47348323623339,2.84004169943904,6.02942899381042,3.8193877767213,5.17853047411459,13.781494275878,7.96228098245436,12.9391385874619,11.5363693777236,6.55279113540577,10.3557339958316,7.3552939543984,8.20153986317724,1.66277871149944,11.5589761179996,10.1038285394056,8.82674446030978,4.45911471748154,4.85768146581266,2.61848004974615,4.09780660501378,3.94087860265477,2.43611158613652,4.46473352240964,2.29408640602033,3.10832967358612,1.44649058581512,3.01582567878545,3.26343410291226,2.95058563811422,2.20749397043786,8.99083303931635,10.7834751664827,7.04920265119704,2.52470927204373,10.7272794601527,10.9322848403059,10.3403230911743,11.9484398976276,7.79795359288379,12.1722908239198,8.50102473517278,12.5670018901864,9.88219444866309,4.4984984299053,4.5420827266646,5.52003371368491,7.65568708961808,3.13443233647817,3.98235415019888,6.79785781233948,5.74414758233027,3.77210159511796,6.496641643377,5.84126781093462,5.42699415653264,2.90826983582004,5.34746067577082,4.10847785316561,2.10837217149998,3.09406629744561,6.46835250932197,11.7039711120352,7.76152102696527,8.57348140126369,7.27094957933322,7.66985915688903,8.55654907131029,5.48036908406279,3.98941903708308,4.66030555900404,3.52845436887939,0.65954501176592,2.58343082713449,1.99032652262914,1.19372344003136,0.984845398470368,8.74442509889552,9.08583979851498,1.70870880797853,4.74689796315412,2.96311243791539,1.13021074202815,0.956859594047176,0.915112692826091,1.18984900995699,0.69975726161829,1.10559979043539,2.86401185404534,14.2351197111511,7.5228202836934,6.26430976766447,5.22720740036172,3.27543845619266,4.45052343069908,3.96736587481612,4.18809507174447,2.85152941241944,2.4853572523477,1.12738587736838,7.62534384824292,7.61109056102649,8.5558522871381,5.42471258606471,4.73077151374179,7.04143431874524,7.42164993610516,8.38874755405687,2.65742532908607,2.88030006257865,1.26404448251271,3.04087822935246,5.13554785824136,3.11809975146708,3.40150721768215,1.19208812868759,3.36547258655913,3.69223817936443,2.42319479875554,2.74344503957999,2.82313318383153,2.0466154955348,2.5977197242889,2.22066114144981,1.13365191807606,2.66383144048878,2.51198798506532,0.671538465456314,4.056981474676,3.56596703357246,5.12824547948342,1.07184189539533,6.52043735245972,3.3885110557024,3.22227665555024,3.43737308063638,5.32744865265431,5.48066015816514,1.5107877947794,4.72515750162264,3.15224842256954,5.43770890781046,3.10656187051092,15.256740094874,19.9512436700516,9.56108192223151,8.265628380322,6.07878171621149,4.77993121970037,4.22268782823069,4.73880631649457,3.20919209591815,3.03236654116557,5.32306529769503,6.03604292435444,4.58843386602424,3.84150914429216,4.36509564062661,3.33405583898152,5.2147946675185,3.8581844092741,4.53294490883637,3.97437084362873,2.05721551431249,4.79184676630211,4.5302876089991,4.0696996657052,5.55245344450451,3.9768865709088,4.20734337607377,3.6829759601298,5.29636043998861,1.12228454331548,4.62676570684279,4.92522411877817,4.09231043169689,5.57772628269478,5.98010494041538,6.24526444844865,3.50897412668113,4.72716318906256,4.01705497344571,2.64709702943419,2.78241402744506 | |phase1_expression=5.60520964866779,13.2610654902957,14.1049764210756,20.5675663688644,23.5420993074783,11.4157904900085,12.1478573109673,4.77756296733832,0.84473233291,2.57470978954193,1.54096171402954,1.51567102091139,10.2720437958723,10.0533462781847,0.666219523631325,0.607425802169478,0.699561878128147,3.78554598429885,6.03303507865251,4.2438965179803,2.04103896362567,1.19149141441062,0.783599367416806,12.9593862462659,12.15869189656,16.6527269593356,17.230479846363,7.97243560937789,13.6816862008589,16.1299283046356,10.199603490144,3.17515336729816,2.46025915033828,0,4.04392267651784,6.31691652362271,5.71674197534634,0,0,0,0,0,0,5.66535680890098,7.40051597902456,9.72797786456912,0,1.52617609466313,1.31811709640683,3.11087838518853,3.77963338388479,2.87505128729943,2.68452169692378,5.80289713609076,5.37750078627942,2.57259436035947,6.01720223871389,4.64104883049698,10.5204559646991,8.46385566835253,6.97214543856797,3.72728985276045,4.4464739805557,2.2497492932035,0.988866362566974,2.8419204597844,1.19840044207362,0.384218305321555,18.664130215526,17.4157660447881,19.3498964443271,5.71301968807607,5.74258206474195,18.1286382838132,15.9103481890272,17.4651569455904,9.91042928994498,12.7687338085188,8.90917892886212,10.8146755938759,8.5083508550241,9.89735404057844,9.49222196604695,12.380777420697,9.62628960993904,6.18720029494702,5.97961059356232,10.8111678578674,3.93776205332557,4.30757892608677,8.69593466105033,7.74381489283248,7.47968467078526,8.63525106620507,5.84798775702902,17.0250217096988,4.91555470461132,5.28333999991979,3.11743205523443,4.24007489412408,5.21120653173718,8.98285341900225,5.09610479413291,7.11066703153331,3.030874574157,6.08063677140237,8.08839112023653,6.96521666286266,5.43769555659061,3.56261133755579,4.8575891494518,6.08930956624282,3.22861696158482,4.6724018571313,5.76184664964954,3.89566433121994,4.44950941921873,1.01219549843938,0.884610551949874,1.7794353494215,2.42925670306433,0.969750506270444,5.59175283654366,7.02673912827713,7.54008144528438,8.9409969323007,0.718890747035522,1.19980546198682,0.635351135365324,10.0359728401231,6.40500843946077,11.0575829859321,3.82413504423008,4.85859368927628,9.14267396062064,7.78758062725237,7.23059483337246,1.8661045591514,6.82351447770922,17.4666740385773,13.4024056251585,6.89706313300419,8.10279584124071,8.89158425230719,7.00775941258677,7.81493693737584,6.27801554550183,11.9003550539947,13.3652155618362,11.535470890237,13.5482365606241,8.98702502953057,7.78532297831674,5.2237824978325,2.67516777330327,12.9372273432021,0.702213187313235,0.772043721344145,0.852490498186778,5.38527008592305,4.69052119962192,4.8616756594474,5.20838418287463,2.16440654922144,2.77680803197281,0.930135779001631,2.14618721119695,2.56883753207773,1.81015834904829,0.656669856316381,0.891756905004413,1.60819986167866,1.3173006917463,1.74468344388483,5.46753866266731,11.3195073617213,16.8513579321737,5.28901133327089,11.9441420299731,11.3795969211615,7.08771037271513,6.6555563125703,8.45036566610507,5.89699440948933,11.3886974770683,7.90554982675252,8.54539709920916,6.96347652144028,7.01870713628832,6.29173586057955,10.3746263939853,12.1476176685164,6.63837653335786,8.79713547094912,5.63538678365402,5.09128319613286,6.40043207653165,7.78507600782536,3.41477300470989,2.65698266363284,1.56998727841375,3.94870924549762,7.41131567717872,3.17005700860579,4.52085688760367,2.47348323623339,2.84004169943904,6.02942899381042,3.8193877767213,5.17853047411459,13.781494275878,7.96228098245436,12.9391385874619,11.5363693777236,6.55279113540577,10.3557339958316,7.3552939543984,8.20153986317724,1.66277871149944,11.5589761179996,10.1038285394056,8.82674446030978,4.45911471748154,4.85768146581266,2.61848004974615,4.09780660501378,3.94087860265477,2.43611158613652,4.46473352240964,2.29408640602033,3.10832967358612,1.44649058581512,3.01582567878545,3.26343410291226,2.95058563811422,2.20749397043786,8.99083303931635,10.7834751664827,7.04920265119704,2.52470927204373,10.7272794601527,10.9322848403059,10.3403230911743,11.9484398976276,7.79795359288379,12.1722908239198,8.50102473517278,12.5670018901864,9.88219444866309,4.4984984299053,4.5420827266646,5.52003371368491,7.65568708961808,3.13443233647817,3.98235415019888,6.79785781233948,5.74414758233027,3.77210159511796,6.496641643377,5.84126781093462,5.42699415653264,2.90826983582004,5.34746067577082,4.10847785316561,2.10837217149998,3.09406629744561,6.46835250932197,11.7039711120352,7.76152102696527,8.57348140126369,7.27094957933322,7.66985915688903,8.55654907131029,5.48036908406279,3.98941903708308,4.66030555900404,3.52845436887939,0.65954501176592,2.58343082713449,1.99032652262914,1.19372344003136,0.984845398470368,8.74442509889552,9.08583979851498,1.70870880797853,4.74689796315412,2.96311243791539,1.13021074202815,0.956859594047176,0.915112692826091,1.18984900995699,0.69975726161829,1.10559979043539,2.86401185404534,14.2351197111511,7.5228202836934,6.26430976766447,5.22720740036172,3.27543845619266,4.45052343069908,3.96736587481612,4.18809507174447,2.85152941241944,2.4853572523477,1.12738587736838,7.62534384824292,7.61109056102649,8.5558522871381,5.42471258606471,4.73077151374179,7.04143431874524,7.42164993610516,8.38874755405687,2.65742532908607,2.88030006257865,1.26404448251271,3.04087822935246,5.13554785824136,3.11809975146708,3.40150721768215,1.19208812868759,3.36547258655913,3.69223817936443,2.42319479875554,2.74344503957999,2.82313318383153,2.0466154955348,2.5977197242889,2.22066114144981,1.13365191807606,2.66383144048878,2.51198798506532,0.671538465456314,4.056981474676,3.56596703357246,5.12824547948342,1.07184189539533,6.52043735245972,3.3885110557024,3.22227665555024,3.43737308063638,5.32744865265431,5.48066015816514,1.5107877947794,4.72515750162264,3.15224842256954,5.43770890781046,3.10656187051092,15.256740094874,19.9512436700516,9.56108192223151,8.265628380322,6.07878171621149,4.77993121970037,4.22268782823069,4.73880631649457,3.20919209591815,3.03236654116557,5.32306529769503,6.03604292435444,4.58843386602424,3.84150914429216,4.36509564062661,3.33405583898152,5.2147946675185,3.8581844092741,4.53294490883637,3.97437084362873,2.05721551431249,4.79184676630211,4.5302876089991,4.0696996657052,5.55245344450451,3.9768865709088,4.20734337607377,3.6829759601298,5.29636043998861,1.12228454331548,4.62676570684279,4.92522411877817,4.09231043169689,5.57772628269478,5.98010494041538,6.24526444844865,3.50897412668113,4.72716318906256,4.01705497344571,2.64709702943419,2.78241402744506 | ||
|short_description=p2@Rcbtb1 | |||
}} | }} |
Latest revision as of 04:41, 26 September 2015
Short description: | p2@Rcbtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rcbtb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000095778, ENSMUST00000140136_5end |
EntrezGene: | Rcbtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.09e-12 | 33 |
neuronal stem cell | 2.09e-12 | 33 |
neuroblast | 2.09e-12 | 33 |
electrically signaling cell | 2.09e-12 | 33 |
electrically responsive cell | 1.27e-11 | 39 |
electrically active cell | 1.27e-11 | 39 |
embryonic cell | 3.74e-10 | 70 |
CNS neuron (sensu Vertebrata) | 5.36e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.36e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.20e-09 | 31 |
neurectoderm | 6.75e-09 | 64 |
neural plate | 6.75e-09 | 64 |
presumptive neural plate | 6.75e-09 | 64 |
central nervous system | 2.32e-08 | 73 |
nervous system | 5.27e-08 | 75 |
organ system subdivision | 1.02e-07 | 194 |
pre-chordal neural plate | 2.61e-07 | 49 |
mucosa | 3.83e-07 | 15 |