FFCP PHASE1:Hg19::chr7:5568016..5568065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-287bp_to_ENST00000464611_5end | |association_with_transcript=-287bp_to_ENST00000464611_5end | ||
|cluster_id=chr7:5568016..5568065,- | |||
|coexpression_cluster_id=C1999 | |coexpression_cluster_id=C1999 | ||
|description=CAGE_peak_3_at_ACTB_5end | |description=CAGE_peak_3_at_ACTB_5end |
Latest revision as of 02:00, 19 September 2015
Short description: | p3@ACTB |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTB_5end |
Coexpression cluster: | C1999_Neutrophils_Alveolar_Olfactory_Smooth_Monocytederived_Renal_Dendritic |
Association with transcript: | -287bp_to_ENST00000464611_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@ACTB |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.00e-11 | 121 |
somatic stem cell | 5.36e-11 | 433 |
multi fate stem cell | 1.15e-10 | 427 |
stem cell | 6.54e-10 | 441 |
electrically responsive cell | 6.74e-09 | 61 |
electrically active cell | 6.74e-09 | 61 |
embryonic cell | 8.10e-09 | 250 |
smooth muscle cell | 1.65e-08 | 43 |
smooth muscle myoblast | 1.65e-08 | 43 |
muscle precursor cell | 2.13e-08 | 58 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.33e-11 | 315 |
mesoderm-derived structure | 3.33e-11 | 315 |
presumptive mesoderm | 3.33e-11 | 315 |
epithelial vesicle | 7.76e-11 | 78 |
musculoskeletal system | 2.60e-09 | 167 |
lateral plate mesoderm | 2.46e-08 | 203 |
somite | 3.02e-08 | 71 |
presomitic mesoderm | 3.02e-08 | 71 |
presumptive segmental plate | 3.02e-08 | 71 |
dermomyotome | 3.02e-08 | 71 |
Showing 1 to 10 of 32 entries