FFCP PHASE1:Hg19::chr7:82072908..82072925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=781 | |EntrezGene=781 | ||
| Line 8: | Line 8: | ||
|UniProt=F8WC36,P54289,Q9UDQ3 | |UniProt=F8WC36,P54289,Q9UDQ3 | ||
|association_with_transcript=105bp_to_ENST00000284088,ENST00000356253,NM_000722,uc003uhr.1_5end | |association_with_transcript=105bp_to_ENST00000284088,ENST00000356253,NM_000722,uc003uhr.1_5end | ||
|cluster_id=chr7:82072908..82072925,- | |||
|description=CAGE_peak_7_at_CACNA2D1_5end | |description=CAGE_peak_7_at_CACNA2D1_5end | ||
|id=chr7:82072908..82072925,- | |id=chr7:82072908..82072925,- | ||
Latest revision as of 18:33, 19 September 2015
| Short description: | p7@CACNA2D1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_CACNA2D1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 105bp_to_ENST00000284088, ENST00000356253, NM_000722, uc003uhr.1_5end |
| EntrezGene: | CACNA2D1 |
| HGNC: | 1399 |
| UniProt: | F8WC36P54289Q9UDQ3 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p7@CACNA2D1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 7.95e-25 | 53 |
| regional part of brain | 7.95e-25 | 53 |
| regional part of forebrain | 4.37e-23 | 41 |
| forebrain | 4.37e-23 | 41 |
| anterior neural tube | 4.37e-23 | 41 |
| future forebrain | 4.37e-23 | 41 |
| neural tube | 8.51e-23 | 56 |
| neural rod | 8.51e-23 | 56 |
| future spinal cord | 8.51e-23 | 56 |
| neural keel | 8.51e-23 | 56 |
Showing 1 to 10 of 41 entries
