FF:11869-125B6: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005846 | |DRA_sample_Accession=CAGE@SAMD00005846 | ||
|accession_numbers=CAGE;DRX008135;DRR009007;DRZ000432;DRZ001817 | |accession_numbers=CAGE;DRX008135;DRR009007;DRZ000432;DRZ001817;DRZ011782;DRZ013167 | ||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.08!1202.36!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.87!746.33!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.56!357.94!ZNF385A;;chr7:115670804..115670825,-!p1@TFEC!2.43!265.90!TFEC;;chr21:34442439..34442455,+!p1@OLIG1!2.40!249.16!OLIG1;;chr20:39317868..39317884,-!p1@MAFB!2.24!1930.79!MAFB;;chr10:64576105..64576133,-!p1@EGR2!2.19!305.41!EGR2;;chr11:47399947..47399961,-!p3@SPI1!2.18!150.85!SPI1;;chr11:47400062..47400077,-!p2@SPI1!2.09!122.26!SPI1;;chr16:85932760..85932775,+!p1@IRF8!2.04!107.85!IRF8;;chr2:70142232..70142251,+!p1@MXD1!1.99!510.88!MXD1;;chr6:106534192..106534224,+!p1@PRDM1!1.94!234.75!PRDM1;;chr11:47399996..47400014,-!p4@SPI1!1.92!82.51!SPI1;;chr11:47400032..47400043,-!p5@SPI1!1.88!74.61!SPI1;;chr2:145277640..145277771,-!p1@ZEB2!1.83!833.26!ZEB2;;chr19:50432132..50432217,+!p2@ATF5!1.81!75.77!ATF5;;chr1:25256756..25256774,-!p1@RUNX3!1.80!112.50!RUNX3;;chr14:35872453..35872485,-!p2@NFKBIA!1.77!139.22!NFKBIA;;chr10:31288398..31288455,-!p2@ZNF438!1.72!60.20!ZNF438;;chr19:45971246..45971265,+!p1@FOSB!1.68!826.05!FOSB;;chr12:72056749..72056767,+!p6@THAP2!1.68!51.60!THAP2;;chr12:54778351..54778378,-!p6@ZNF385A!1.68!47.18!ZNF385A;;chr10:35484053..35484076,+!p1@CREM!1.67!112.03!CREM;;chr10:51572408..51572454,+!p3@NCOA4!1.63!234.75!NCOA4;;chr12:72056800..72056834,+!p1@THAP2!1.63!55.55!THAP2;;chr6:106534230..106534254,+!p2@PRDM1!1.60!94.60!PRDM1;;chr14:35873947..35873965,-!p1@NFKBIA!1.59!2243.17!NFKBIA;;chr10:51572339..51572376,+!p4@NCOA4!1.59!82.51!NCOA4;;chr8:22550982..22550999,-!p1@EGR3!1.58!100.41!EGR3;;chr10:31288370..31288393,-!p3@ZNF438!1.58!36.96!ZNF438;;chr7:50344289..50344323,+!p1@IKZF1!1.56!35.56!IKZF1;;chr2:145275162..145275202,-!p2@ZEB2!1.55!194.54!ZEB2;;chr2:157189180..157189290,-!p1@NR4A2!1.55!173.86!NR4A2;;chr11:47400045..47400060,-!p6@SPI1!1.54!33.93!SPI1;;chr6:44233252..44233296,-!p1@NFKBIE!1.53!313.08!NFKBIE;;chr14:35872962..35873025,-!p3@NFKBIA!1.53!81.82!NFKBIA;;chr12:52445218..52445237,+!p1@NR4A1!1.52!382.58!NR4A1;;chr2:145277882..145277967,-!p3@ZEB2!1.52!55.09!ZEB2;;chr10:104155659..104155676,+!p4@NFKB2!1.52!39.51!NFKB2;;chr10:64018918..64018936,+!p2@ZNF365!1.52!31.84!ZNF365;;chr21:34442540..34442560,+!p2@OLIG1!1.50!30.68!OLIG1;;chr16:31885093..31885165,+!p1@ZNF267!1.49!434.64!ZNF267;;chr2:68592394..68592405,+!p2@PLEK!1.48!29.05!PLEK;;chr4:103422499..103422632,+!p1@NFKB1!1.47!564.80!NFKB1;;chr10:104155480..104155534,+!p2@NFKB2!1.47!176.88!NFKB2;;chr21:34398234..34398250,+!p1@OLIG2!1.47!28.36!OLIG2;;chr1:212782094..212782109,+!p1@ATF3!1.46!721.23!ATF3;;chr10:104154246..104154347,+!p3@NFKB2!1.46!163.17!NFKB2;;chr19:36391434..36391450,-!p1@NFKBID!1.46!53.23!NFKBID;;chr12:72056773..72056796,+!p3@THAP2!1.46!36.03!THAP2;;chr2:61108695..61108753,+!p1@REL!1.45!179.90!REL;;chr9:102584262..102584276,+!p1@NR4A3!1.45!59.73!NR4A3;;chr7:128577972..128578047,+!p1@IRF5!1.45!41.84!IRF5;;chr6:144385698..144385742,-!p2@PLAGL1!1.45!32.77!PLAGL1;;chr19:45252008..45252024,+!p2@BCL3!1.44!84.84!BCL3;;chrX:129244454..129244488,-!p1@ELF4!1.40!169.67!ELF4;;chr13:41593425..41593480,-!p1@ELF1!1.40!148.29!ELF1;;chr1:38325227..38325246,-!p2@MTF1!1.38!30.91!MTF1;;chr11:47399920..47399931,-!p7@SPI1!1.38!23.24!SPI1;;chr19:42636586..42636607,-!p1@POU2F2!1.37!60.90!POU2F2;;chr9:102584159..102584174,+!p2@NR4A3!1.37!39.51!NR4A3;;chr2:70314240..70314256,+!p4@PCBP1!1.36!44.39!PCBP1;;chr9:102584128..102584144,+!p3@NR4A3!1.36!41.14!NR4A3;;chr3:12330560..12330579,+!p1@PPARG!1.36!24.87!PPARG;;chr11:65430554..65430579,-!p3@RELA!1.35!53.46!RELA;;chrX:153305787..153305807,-!p3@MECP2!1.33!20.22!MECP2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.31!231.73!ZC3H12A;;chr6:15246200..15246214,+!p2@JARID2!1.31!52.30!JARID2;;chr2:28618532..28618610,+!p4@FOSL2!1.31!33.00!FOSL2;;chr22:38597987..38598021,+!p2@MAFF!1.29!111.33!MAFF;;chr6:12012170..12012245,+!p1@HIVEP1!1.29!92.04!HIVEP1;;chr3:12329397..12329433,+!p2@PPARG!1.29!41.60!PPARG;;chr21:36260295..36260310,-!p3@RUNX1!1.29!29.52!RUNX1;;chr2:145277589..145277612,-!p12@ZEB2!1.29!18.59!ZEB2;;chr20:48599506..48599526,+!p1@SNAI1!1.28!113.19!SNAI1;;chr19:50432104..50432126,+!p6@ATF5!1.27!17.43!ATF5;;chr4:106068026..106068084,+!p1@TET2!1.26!152.47!TET2;;chr21:30671235..30671253,+!p1@BACH1!1.25!211.28!BACH1;;chr21:30671690..30671762,+!p2@BACH1!1.25!56.71!BACH1;;chr14:35872926..35872951,-!p4@NFKBIA!1.25!23.71!NFKBIA;;chr20:48807351..48807384,+!p1@CEBPB!1.24!1637.23!CEBPB;;chr12:48298765..48298783,-!p2@VDR!1.24!34.17!VDR;;chr2:70167296..70167306,+!p3@MXD1!1.23!24.17!MXD1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.22!21.85!NFKBIZ;;chr17:38497662..38497713,+!p4@RARA!1.22!18.13!RARA;;chr7:17338266..17338282,+!p1@AHR!1.21!162.24!AHR;;chr1:221052776..221052799,+!p1@HLX!1.21!27.43!HLX;;chr19:45251395..45251432,+!p8@BCL3!1.21!15.11!BCL3;;chr4:103423079..103423112,+!p4@NFKB1!1.21!15.11!NFKB1;;chr2:28615716..28615733,+!p1@FOSL2!1.20!682.41!FOSL2;;chr10:104155455..104155479,+!p1@NFKB2!1.18!201.75!NFKB2;;chr19:45250948..45250998,+!p3@BCL3!1.18!35.79!BCL3;;chr14:35872494..35872511,-!p5@NFKBIA!1.18!18.59!NFKBIA;;chr3:101568349..101568365,+!p1@NFKBIZ!1.17!709.14!NFKBIZ;;chr9:129567282..129567353,+!p1@ZBTB43!1.17!179.90!ZBTB43;;chr2:238600933..238600985,+!p3@LRRFIP1!1.17!74.84!LRRFIP1;;chr7:17338324..17338341,+!p3@AHR!1.17!46.25!AHR;;chr8:123793988..123794016,+!p1@ZHX2!1.17!24.17!ZHX2;;chr6:106535598..106535637,+!p7@PRDM1!1.17!13.95!PRDM1;;chr8:53373491..53373506,-!p4@ST18!1.17!13.95!ST18;;chr2:97202480..97202499,+!p1@ARID5A!1.16!133.65!ARID5A;;chr12:11802753..11802834,+!p2@ETV6!1.16!65.31!ETV6;;chr21:36421535..36421610,-!p2@RUNX1!1.16!47.65!RUNX1;;chr6:12011943..12012015,+!p2@HIVEP1!1.16!42.77!HIVEP1;;chr18:3449720..3449749,+!p2@TGIF1!1.16!28.36!TGIF1;;chr19:19496539..19496576,+!p8@GATAD2A!1.16!23.71!GATAD2A;;chrX:129244430..129244442,-!p5@ELF4!1.16!13.48!ELF4;;chr21:30672433..30672464,+!p6@BACH1!1.16!13.48!BACH1;;chr11:65430535..65430549,-!p4@RELA!1.15!15.34!RELA;;chr13:41593392..41593403,-!p7@ELF1!1.15!13.25!ELF1;;chr2:145271342..145271377,-!p5@ZEB2!1.15!13.02!ZEB2;;chr18:3449618..3449634,+!p13@TGIF1!1.14!16.04!TGIF1;;chr1:25256439..25256476,-!p3@RUNX3!1.14!12.78!RUNX3;;chr10:31288329..31288353,-!p7@ZNF438!1.14!12.78!ZNF438;;chr1:157108130..157108173,-!p1@ETV3!1.13!90.88!ETV3;;chr12:48298785..48298828,-!p1@VDR!1.13!66.24!VDR;;chr11:615942..615957,-!p1@IRF7!1.12!115.28!IRF7;;chr7:115670792..115670797,-!p2@TFEC!1.12!12.32!TFEC;;chr9:110252035..110252057,-!p1@KLF4!1.11!189.43!KLF4;;chr19:13213662..13213686,-!p1@LYL1!1.11!17.66!LYL1;;chr2:238600998..238601013,+!p5@LRRFIP1!1.11!11.85!LRRFIP1;;chr19:45504688..45504782,+!p1@RELB!1.10!70.19!RELB;;chr1:156470515..156470542,-!p2@MEF2D!1.10!61.36!MEF2D;;chr20:48809000..48809053,+!p12@CEBPB!1.10!15.34!CEBPB;;chr6:391743..391759,+!p1@IRF4!1.10!11.62!IRF4;;chr6:15246261..15246312,+!p1@JARID2!1.09!275.89!JARID2;;chr3:170075436..170075520,+!p1@SKIL!1.09!243.59!SKIL;;chr5:88178983..88179012,-!p1@MEF2C!1.09!86.70!MEF2C;;chr12:96588279..96588299,+!p4@ELK3!1.09!53.92!ELK3;;chr18:3449586..3449617,+!p8@TGIF1!1.07!17.43!TGIF1;;chr14:64970670..64970712,-!p3@ZBTB25!1.06!23.01!ZBTB25;;chr18:3449527..3449582,+!p6@TGIF1!1.06!20.22!TGIF1;;chr12:96588219..96588263,+!p2@ELK3!1.05!74.14!ELK3;;chr12:54785074..54785122,-!p2@ZNF385A!1.05!15.81!ZNF385A;;chr2:145275228..145275241,-!p11@ZEB2!1.05!12.32!ZEB2;;chr9:117150254..117150271,-!p1@AKNA!1.04!27.43!AKNA;;chr4:81104895..81104920,+!p2@PRDM8!1.04!14.88!PRDM8;;chr19:45254529..45254561,+!p10@BCL3!1.04!13.71!BCL3;;chr6:15246741..15246765,+!p9@JARID2!1.04!9.99!JARID2;;chr3:39195037..39195069,-!p2@CSRNP1!1.03!61.13!CSRNP1;;chr19:33793430..33793447,-!p1@CEBPA!1.03!41.14!CEBPA;;chr6:12012249..12012266,+!p5@HIVEP1!1.03!16.97!HIVEP1;;chr8:71316428..71316459,-!p2@NCOA2!1.03!16.50!NCOA2;;chr12:54785054..54785072,-!p4@ZNF385A!1.03!10.92!ZNF385A;;chr9:88969303..88969335,-!p1@ZCCHC6!1.02!90.88!ZCCHC6;;chr2:208394817..208394834,+!p3@CREB1!1.02!39.05!CREB1;;chr17:38474489..38474548,+!p1@RARA!1.01!298.90!RARA;;chr19:45251943..45252006,+!p1@BCL3!1.01!250.09!BCL3;;chr10:3827371..3827386,-!p2@KLF6!1.01!80.19!KLF6;;chr18:3448455..3448480,+!p5@TGIF1!1.01!17.43!TGIF1;;chr9:102584241..102584261,+!p4@NR4A3!1.01!14.64!NR4A3;;chr2:113999360..113999386,-!p4@PAX8!1.01!9.30!PAX8;;chr10:35484090..35484104,+!p6@CREM!1.01!9.30!CREM;;chr2:70142189..70142223,+!p2@MXD1!1.00!66.01!MXD1;;chr7:149470641..149470694,-!p1@ZNF467!1.00!41.84!ZNF467;;chr19:19496624..19496660,+!p3@GATAD2A!1.00!41.84!GATAD2A;;chr2:192015701..192015743,-!p1@STAT4!1.00!12.55!STAT4;;chr14:35872414..35872425,-!p7@NFKBIA!1.00!9.99!NFKBIA;;chr2:231090433..231090469,+!p1@SP140!1.00!9.06!SP140;;chr21:40177845..40177863,+!p1@ETS2!0.99!532.03!ETS2;;chr3:37217736..37217753,-!p2@LRRFIP2!0.99!37.89!LRRFIP2;;chr4:185395633..185395651,-!p2@IRF2!0.99!14.18!IRF2;;chr2:61108771..61108789,+!p4@REL!0.99!13.48!REL;;chr3:39195139..39195150,-!p3@CSRNP1!0.99!11.16!CSRNP1;;chr19:47616992..47617011,-!p4@ZC3H4!0.98!18.83!ZC3H4;;chr20:48807456..48807475,+!p3@CEBPB!0.98!16.73!CEBPB;;chr2:61108808..61108821,+!p3@REL!0.98!10.92!REL;;chr14:35872542..35872553,-!p10@NFKBIA!0.98!8.60!NFKBIA;;chr6:20403916..20403965,+!p3@E2F3!0.97!38.58!E2F3;;chr17:38498594..38498661,+!p2@RARA!0.97!28.59!RARA;;chr12:96588368..96588394,+!p3@ELK3!0.97!23.01!ELK3;;chr8:116681150..116681164,-!p5@TRPS1!0.97!16.73!TRPS1;;chr19:12902289..12902307,+!p1@JUNB!0.96!1903.59!JUNB;;chr9:137217986..137218049,+!p3@RXRA!0.96!23.94!RXRA;;chr17:79885537..79885554,-!p2@MAFG!0.96!16.04!MAFG;;chr5:88179195..88179224,-!p3@MEF2C!0.96!13.25!MEF2C;;chr5:142782823..142782854,-!p3@NR3C1!0.96!11.85!NR3C1;;chr19:45254508..45254528,+!p12@BCL3!0.96!8.83!BCL3;;chr9:102584278..102584285,+!p5@NR4A3!0.96!8.14!NR4A3;;chr3:5020939..5020952,+!p2@BHLHE40!0.95!25.57!BHLHE40;;chr9:3525727..3525828,-!p2@RFX3!0.95!20.69!RFX3;;chr8:116681123..116681143,-!p4@TRPS1!0.95!15.81!TRPS1;;chr3:150126101..150126118,+!p6@TSC22D2!0.95!13.25!TSC22D2;;chr3:12392932..12392962,+!p8@PPARG!0.95!7.90!PPARG;;chr21:36260980..36261011,-!p1@RUNX1!0.94!232.89!RUNX1;;c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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.08!1202.36!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.87!746.33!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.56!357.94!ZNF385A;;chr7:115670804..115670825,-!p1@TFEC!2.43!265.90!TFEC;;chr21:34442439..34442455,+!p1@OLIG1!2.40!249.16!OLIG1;;chr20:39317868..39317884,-!p1@MAFB!2.24!1930.79!MAFB;;chr10:64576105..64576133,-!p1@EGR2!2.19!305.41!EGR2;;chr11:47399947..47399961,-!p3@SPI1!2.18!150.85!SPI1;;chr11:47400062..47400077,-!p2@SPI1!2.09!122.26!SPI1;;chr16:85932760..85932775,+!p1@IRF8!2.04!107.85!IRF8;;chr2:70142232..70142251,+!p1@MXD1!1.99!510.88!MXD1;;chr6:106534192..106534224,+!p1@PRDM1!1.94!234.75!PRDM1;;chr11:47399996..47400014,-!p4@SPI1!1.92!82.51!SPI1;;chr11:47400032..47400043,-!p5@SPI1!1.88!74.61!SPI1;;chr2:145277640..145277771,-!p1@ZEB2!1.83!833.26!ZEB2;;chr19:50432132..50432217,+!p2@ATF5!1.81!75.77!ATF5;;chr1:25256756..25256774,-!p1@RUNX3!1.80!112.50!RUNX3;;chr14:35872453..35872485,-!p2@NFKBIA!1.77!139.22!NFKBIA;;chr10:31288398..31288455,-!p2@ZNF438!1.72!60.20!ZNF438;;chr19:45971246..45971265,+!p1@FOSB!1.68!826.05!FOSB;;chr12:72056749..72056767,+!p6@THAP2!1.68!51.60!THAP2;;chr12:54778351..54778378,-!p6@ZNF385A!1.68!47.18!ZNF385A;;chr10:35484053..35484076,+!p1@CREM!1.67!112.03!CREM;;chr10:51572408..51572454,+!p3@NCOA4!1.63!234.75!NCOA4;;chr12:72056800..72056834,+!p1@THAP2!1.63!55.55!THAP2;;chr6:106534230..106534254,+!p2@PRDM1!1.60!94.60!PRDM1;;chr14:35873947..35873965,-!p1@NFKBIA!1.59!2243.17!NFKBIA;;chr10:51572339..51572376,+!p4@NCOA4!1.59!82.51!NCOA4;;chr8:22550982..22550999,-!p1@EGR3!1.58!100.41!EGR3;;chr10:31288370..31288393,-!p3@ZNF438!1.58!36.96!ZNF438;;chr7:50344289..50344323,+!p1@IKZF1!1.56!35.56!IKZF1;;chr2:145275162..145275202,-!p2@ZEB2!1.55!194.54!ZEB2;;chr2:157189180..157189290,-!p1@NR4A2!1.55!173.86!NR4A2;;chr11:47400045..47400060,-!p6@SPI1!1.54!33.93!SPI1;;chr6:44233252..44233296,-!p1@NFKBIE!1.53!313.08!NFKBIE;;chr14:35872962..35873025,-!p3@NFKBIA!1.53!81.82!NFKBIA;;chr12:52445218..52445237,+!p1@NR4A1!1.52!382.58!NR4A1;;chr2:145277882..145277967,-!p3@ZEB2!1.52!55.09!ZEB2;;chr10:104155659..104155676,+!p4@NFKB2!1.52!39.51!NFKB2;;chr10:64018918..64018936,+!p2@ZNF365!1.52!31.84!ZNF365;;chr21:34442540..34442560,+!p2@OLIG1!1.50!30.68!OLIG1;;chr16:31885093..31885165,+!p1@ZNF267!1.49!434.64!ZNF267;;chr2:68592394..68592405,+!p2@PLEK!1.48!29.05!PLEK;;chr4:103422499..103422632,+!p1@NFKB1!1.47!564.80!NFKB1;;chr10:104155480..104155534,+!p2@NFKB2!1.47!176.88!NFKB2;;chr21:34398234..34398250,+!p1@OLIG2!1.47!28.36!OLIG2;;chr1:212782094..212782109,+!p1@ATF3!1.46!721.23!ATF3;;chr10:104154246..104154347,+!p3@NFKB2!1.46!163.17!NFKB2;;chr19:36391434..36391450,-!p1@NFKBID!1.46!53.23!NFKBID;;chr12:72056773..72056796,+!p3@THAP2!1.46!36.03!THAP2;;chr2:61108695..61108753,+!p1@REL!1.45!179.90!REL;;chr9:102584262..102584276,+!p1@NR4A3!1.45!59.73!NR4A3;;chr7:128577972..128578047,+!p1@IRF5!1.45!41.84!IRF5;;chr6:144385698..144385742,-!p2@PLAGL1!1.45!32.77!PLAGL1;;chr19:45252008..45252024,+!p2@BCL3!1.44!84.84!BCL3;;chrX:129244454..129244488,-!p1@ELF4!1.40!169.67!ELF4;;chr13:41593425..41593480,-!p1@ELF1!1.40!148.29!ELF1;;chr1:38325227..38325246,-!p2@MTF1!1.38!30.91!MTF1;;chr11:47399920..47399931,-!p7@SPI1!1.38!23.24!SPI1;;chr19:42636586..42636607,-!p1@POU2F2!1.37!60.90!POU2F2;;chr9:102584159..102584174,+!p2@NR4A3!1.37!39.51!NR4A3;;chr2:70314240..70314256,+!p4@PCBP1!1.36!44.39!PCBP1;;chr9:102584128..102584144,+!p3@NR4A3!1.36!41.14!NR4A3;;chr3:12330560..12330579,+!p1@PPARG!1.36!24.87!PPARG;;chr11:65430554..65430579,-!p3@RELA!1.35!53.46!RELA;;chrX:153305787..153305807,-!p3@MECP2!1.33!20.22!MECP2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.31!231.73!ZC3H12A;;chr6:15246200..15246214,+!p2@JARID2!1.31!52.30!JARID2;;chr2:28618532..28618610,+!p4@FOSL2!1.31!33.00!FOSL2;;chr22:38597987..38598021,+!p2@MAFF!1.29!111.33!MAFF;;chr6:12012170..12012245,+!p1@HIVEP1!1.29!92.04!HIVEP1;;chr3:12329397..12329433,+!p2@PPARG!1.29!41.60!PPARG;;chr21:36260295..36260310,-!p3@RUNX1!1.29!29.52!RUNX1;;chr2:145277589..145277612,-!p12@ZEB2!1.29!18.59!ZEB2;;chr20:48599506..48599526,+!p1@SNAI1!1.28!113.19!SNAI1;;chr19:50432104..50432126,+!p6@ATF5!1.27!17.43!ATF5;;chr4:106068026..106068084,+!p1@TET2!1.26!152.47!TET2;;chr21:30671235..30671253,+!p1@BACH1!1.25!211.28!BACH1;;chr21:30671690..30671762,+!p2@BACH1!1.25!56.71!BACH1;;chr14:35872926..35872951,-!p4@NFKBIA!1.25!23.71!NFKBIA;;chr20:48807351..48807384,+!p1@CEBPB!1.24!1637.23!CEBPB;;chr12:48298765..48298783,-!p2@VDR!1.24!34.17!VDR;;chr2:70167296..70167306,+!p3@MXD1!1.23!24.17!MXD1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.22!21.85!NFKBIZ;;chr17:38497662..38497713,+!p4@RARA!1.22!18.13!RARA;;chr7:17338266..17338282,+!p1@AHR!1.21!162.24!AHR;;chr1:221052776..221052799,+!p1@HLX!1.21!27.43!HLX;;chr19:45251395..45251432,+!p8@BCL3!1.21!15.11!BCL3;;chr4:103423079..103423112,+!p4@NFKB1!1.21!15.11!NFKB1;;chr2:28615716..28615733,+!p1@FOSL2!1.20!682.41!FOSL2;;chr10:104155455..104155479,+!p1@NFKB2!1.18!201.75!NFKB2;;chr19:45250948..45250998,+!p3@BCL3!1.18!35.79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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11869-125B6 | |fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11869-125B6 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor1.CNhs13474.11869-125B6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11869-125B6 | |id=FF:11869-125B6 | ||
|is_a=EFO:0002091;;FF:0011102 | |is_a=EFO:0002091;;FF:0011102 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13474 | |library_id=CNhs13474 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs13474 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11869 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11869 | |||
|name=CD14+ monocytes - treated with B-glucan, donor1 | |name=CD14+ monocytes - treated with B-glucan, donor1 | ||
|namespace= | |namespace= | ||
Line 51: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13474,LSID1024,release012,COMPLETED | |profile_hcage=CNhs13474,LSID1024,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|top_motifs=NFE2L2:3.61166284728;NFE2:3.55104605596;CEBPA,B_DDIT3:3.40857250745;FOSL2:3.40709924997;BACH2:3.3017291014;FOS_FOS{B,L1}_JUN{B,D}:3.26888706741;SREBF1,2:3.19420498304;PAX2:3.17780067225;HLF:2.96531498198;SPIB:2.95486144479;SPI1:2.90705465126;NFE2L1:2.59025226645;ETS1,2:2.4068483029;NFKB1_REL_RELA:2.39216337574;EP300:2.36302804963;NFIL3:2.27954134901;NANOG{mouse}:2.27210607923;FOXP3:2.24142162368;DMAP1_NCOR{1,2}_SMARC:2.20395921315;ATF5_CREB3:2.13027638746;ATF4:2.04252961487;NR1H4:2.00196566377;FOXN1:1.93241994929;RXRA_VDR{dimer}:1.84556019065;RUNX1..3:1.76707608618;CREB1:1.63780376838;IRF1,2:1.5320736887;ATF6:1.50379210989;ELF1,2,4:1.33450629597;HMX1:1.31100552373;JUN:1.30977403314;MAFB:1.28643074997;PDX1:1.21002632295;TGIF1:1.13524989388;FOXD3:1.124219642;STAT2,4,6:1.08285832148;PPARG:1.06129465816;HMGA1,2:1.03056980438;PAX3,7:0.998401433916;IRF7:0.996765426132;BPTF:0.944664445439;ALX4:0.917199936237;PITX1..3:0.896884813662;HIF1A:0.837887252296;TFCP2:0.821042421757;ALX1:0.73136742442;HSF1,2:0.727124854331;GLI1..3:0.724448029159;ATF2:0.671488032631;ZBTB16:0.664503685516;NFATC1..3:0.589634605891;HES1:0.548245619042;HOX{A5,B5}:0.526691422911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.519491934968;PAX8:0.509346423661;SMAD1..7,9:0.505376628025;HBP1_HMGB_SSRP1_UBTF:0.488919450891;ESR1:0.486798083613;CDX1,2,4:0.466592486954;ESRRA:0.464271014953;PAX1,9:0.428592868649;NR6A1:0.401401840655;XBP1:0.339959786669;NANOG:0.326620100725;EN1,2:0.253324517817;FOXO1,3,4:0.24862925849;GATA4:0.237906091387;TLX2:0.219187824053;SPZ1:0.218161940163;SRF:0.105956073187;MYB:0.103259189521;IKZF2:0.102918483796;PRDM1:0.102058865291;FOXM1:-0.00190186591304;FOXP1:-0.0324758902498;T:-0.0414813439201;RFX2..5_RFXANK_RFXAP:-0.0574820930814;FOX{D1,D2}:-0.0780638832302;TBP:-0.11718054424;AHR_ARNT_ARNT2:-0.158326063852;PAX4:-0.160275326485;DBP:-0.162078992935;FOXL1:-0.233049337615;HOXA9_MEIS1:-0.257829378694;MEF2{A,B,C,D}:-0.257996054461;NKX2-2,8:-0.306943014314;STAT5{A,B}:-0.313844463341;FOX{F1,F2,J1}:-0.31412976248;POU2F1..3:-0.330701333592;IKZF1:-0.352316832465;POU5F1:-0.394229539298;MZF1:-0.431203610423;OCT4_SOX2{dimer}:-0.437136566013;NFIX:-0.469722765633;TFAP4:-0.507119331724;EGR1..3:-0.521979497945;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.584794748406;TBX4,5:-0.585428783849;NKX3-1:-0.700558535369;RREB1:-0.706774783453;HNF4A_NR2F1,2:-0.721283512584;REST:-0.744140378108;MYFfamily:-0.780345708591;RXR{A,B,G}:-0.786298993411;NKX3-2:-0.80898577301;ZNF148:-0.852241138074;HNF1A:-0.856364690651;PAX6:-0.873526826051;VSX1,2:-0.874356213925;POU6F1:-0.876790227365;PATZ1:-0.879238077041;ZNF238:-0.886535768297;ZBTB6:-0.905790612311;TAL1_TCF{3,4,12}:-0.911029782722;SOX2:-0.955014699398;GZF1:-1.00035617283;NHLH1,2:-1.04594620284;MED-1{core}:-1.06906520564;MTE{core}:-1.10608345533;PRRX1,2:-1.12423027442;TFAP2{A,C}:-1.14470764251;GTF2A1,2:-1.1574068127;ZIC1..3:-1.1891720721;GATA6:-1.19115444561;NKX6-1,2:-1.1985081874;STAT1,3:-1.21202225984;ZFP161:-1.21900986693;MYOD1:-1.26067921393;TEF:-1.2688009253;CUX2:-1.30327716411;GCM1,2:-1.320386283;TLX1..3_NFIC{dimer}:-1.36427603105;RFX1:-1.38706517703;UFEwm:-1.38819980441;TOPORS:-1.38944873748;MTF1:-1.39854978357;SOX5:-1.40467833191;XCPE1{core}:-1.41780896499;FOXA2:-1.43595114705;RBPJ:-1.45068366206;TFAP2B:-1.46422459567;SP1:-1.46828606297;NR3C1:-1.47894641476;TEAD1:-1.4798095954;TFDP1:-1.51053064238;TP53:-1.51116108276;ONECUT1,2:-1.52080382856;AIRE:-1.52258867188;EBF1:-1.52913652078;SOX{8,9,10}:-1.53205399507;ZEB1:-1.54729889048;ZNF384:-1.54847997971;E2F1..5:-1.56323009308;KLF4:-1.56458766563;GTF2I:-1.57030226706;ZNF423:-1.57072865057;MAZ:-1.57705200378;CRX:-1.58865636449;ARID5B:-1.59062872419;POU3F1..4:-1.59572232044;RORA:-1.62751802108;NKX2-1,4:-1.63411047257;HOX{A4,D4}:-1.64707570367;EVI1:-1.71743249275;ELK1,4_GABP{A,B1}:-1.74300240721;SNAI1..3:-1.78915629408;HOX{A6,A7,B6,B7}:-1.79926235533;HIC1:-1.8030398169;BREu{core}:-1.83239204245;ADNP_IRX_SIX_ZHX:-1.8615717442;NKX2-3_NKX2-5:-1.87534940053;CDC5L:-1.9603260806;LMO2:-2.01830929016;MYBL2:-2.06874930295;FOX{I1,J2}:-2.0843753093;PAX5:-2.10908980943;AR:-2.17842156428;POU1F1:-2.26311869721;SOX17:-2.27511709747;NR5A1,2:-2.29375348657;bHLH_family:-2.29669033371;GFI1B:-2.31755028792;FOXQ1:-2.36686121165;NFY{A,B,C}:-2.48001614935;YY1:-2.48197780544;PBX1:-2.48821924873;LHX3,4:-2.64153840148;HAND1,2:-2.71457709503;GFI1:-2.7360234283;NRF1:-2.78062441828;ZNF143:-3.21365850472;LEF1_TCF7_TCF7L1,2:-3.43315726121 | |top_motifs=NFE2L2:3.61166284728;NFE2:3.55104605596;CEBPA,B_DDIT3:3.40857250745;FOSL2:3.40709924997;BACH2:3.3017291014;FOS_FOS{B,L1}_JUN{B,D}:3.26888706741;SREBF1,2:3.19420498304;PAX2:3.17780067225;HLF:2.96531498198;SPIB:2.95486144479;SPI1:2.90705465126;NFE2L1:2.59025226645;ETS1,2:2.4068483029;NFKB1_REL_RELA:2.39216337574;EP300:2.36302804963;NFIL3:2.27954134901;NANOG{mouse}:2.27210607923;FOXP3:2.24142162368;DMAP1_NCOR{1,2}_SMARC:2.20395921315;ATF5_CREB3:2.13027638746;ATF4:2.04252961487;NR1H4:2.00196566377;FOXN1:1.93241994929;RXRA_VDR{dimer}:1.84556019065;RUNX1..3:1.76707608618;CREB1:1.63780376838;IRF1,2:1.5320736887;ATF6:1.50379210989;ELF1,2,4:1.33450629597;HMX1:1.31100552373;JUN:1.30977403314;MAFB:1.28643074997;PDX1:1.21002632295;TGIF1:1.13524989388;FOXD3:1.124219642;STAT2,4,6:1.08285832148;PPARG:1.06129465816;HMGA1,2:1.03056980438;PAX3,7:0.998401433916;IRF7:0.996765426132;BPTF:0.944664445439;ALX4:0.917199936237;PITX1..3:0.896884813662;HIF1A:0.837887252296;TFCP2:0.821042421757;ALX1:0.73136742442;HSF1,2:0.727124854331;GLI1..3:0.724448029159;ATF2:0.671488032631;ZBTB16:0.664503685516;NFATC1..3:0.589634605891;HES1:0.548245619042;HOX{A5,B5}:0.526691422911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.519491934968;PAX8:0.509346423661;SMAD1..7,9:0.505376628025;HBP1_HMGB_SSRP1_UBTF:0.488919450891;ESR1:0.486798083613;CDX1,2,4:0.466592486954;ESRRA:0.464271014953;PAX1,9:0.428592868649;NR6A1:0.401401840655;XBP1:0.339959786669;NANOG:0.326620100725;EN1,2:0.253324517817;FOXO1,3,4:0.24862925849;GATA4:0.237906091387;TLX2:0.219187824053;SPZ1:0.218161940163;SRF:0.105956073187;MYB:0.103259189521;IKZF2:0.102918483796;PRDM1:0.102058865291;FOXM1:-0.00190186591304;FOXP1:-0.0324758902498;T:-0.0414813439201;RFX2..5_RFXANK_RFXAP:-0.0574820930814;FOX{D1,D2}:-0.0780638832302;TBP:-0.11718054424;AHR_ARNT_ARNT2:-0.158326063852;PAX4:-0.160275326485;DBP:-0.162078992935;FOXL1:-0.233049337615;HOXA9_MEIS1:-0.257829378694;MEF2{A,B,C,D}:-0.257996054461;NKX2-2,8:-0.306943014314;STAT5{A,B}:-0.313844463341;FOX{F1,F2,J1}:-0.31412976248;POU2F1..3:-0.330701333592;IKZF1:-0.352316832465;POU5F1:-0.394229539298;MZF1:-0.431203610423;OCT4_SOX2{dimer}:-0.437136566013;NFIX:-0.469722765633;TFAP4:-0.507119331724;EGR1..3:-0.521979497945;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.584794748406;TBX4,5:-0.585428783849;NKX3-1:-0.700558535369;RREB1:-0.706774783453;HNF4A_NR2F1,2:-0.721283512584;REST:-0.744140378108;MYFfamily:-0.780345708591;RXR{A,B,G}:-0.786298993411;NKX3-2:-0.80898577301;ZNF148:-0.852241138074;HNF1A:-0.856364690651;PAX6:-0.873526826051;VSX1,2:-0.874356213925;POU6F1:-0.876790227365;PATZ1:-0.879238077041;ZNF238:-0.886535768297;ZBTB6:-0.905790612311;TAL1_TCF{3,4,12}:-0.911029782722;SOX2:-0.955014699398;GZF1:-1.00035617283;NHLH1,2:-1.04594620284;MED-1{core}:-1.06906520564;MTE{core}:-1.10608345533;PRRX1,2:-1.12423027442;TFAP2{A,C}:-1.14470764251;GTF2A1,2:-1.1574068127;ZIC1..3:-1.1891720721;GATA6:-1.19115444561;NKX6-1,2:-1.1985081874;STAT1,3:-1.21202225984;ZFP161:-1.21900986693;MYOD1:-1.26067921393;TEF:-1.2688009253;CUX2:-1.30327716411;GCM1,2:-1.320386283;TLX1..3_NFIC{dimer}:-1.36427603105;RFX1:-1.38706517703;UFEwm:-1.38819980441;TOPORS:-1.38944873748;MTF1:-1.39854978357;SOX5:-1.40467833191;XCPE1{core}:-1.41780896499;FOXA2:-1.43595114705;RBPJ:-1.45068366206;TFAP2B:-1.46422459567;SP1:-1.46828606297;NR3C1:-1.47894641476;TEAD1:-1.4798095954;TFDP1:-1.51053064238;TP53:-1.51116108276;ONECUT1,2:-1.52080382856;AIRE:-1.52258867188;EBF1:-1.52913652078;SOX{8,9,10}:-1.53205399507;ZEB1:-1.54729889048;ZNF384:-1.54847997971;E2F1..5:-1.56323009308;KLF4:-1.56458766563;GTF2I:-1.57030226706;ZNF423:-1.57072865057;MAZ:-1.57705200378;CRX:-1.58865636449;ARID5B:-1.59062872419;POU3F1..4:-1.59572232044;RORA:-1.62751802108;NKX2-1,4:-1.63411047257;HOX{A4,D4}:-1.64707570367;EVI1:-1.71743249275;ELK1,4_GABP{A,B1}:-1.74300240721;SNAI1..3:-1.78915629408;HOX{A6,A7,B6,B7}:-1.79926235533;HIC1:-1.8030398169;BREu{core}:-1.83239204245;ADNP_IRX_SIX_ZHX:-1.8615717442;NKX2-3_NKX2-5:-1.87534940053;CDC5L:-1.9603260806;LMO2:-2.01830929016;MYBL2:-2.06874930295;FOX{I1,J2}:-2.0843753093;PAX5:-2.10908980943;AR:-2.17842156428;POU1F1:-2.26311869721;SOX17:-2.27511709747;NR5A1,2:-2.29375348657;bHLH_family:-2.29669033371;GFI1B:-2.31755028792;FOXQ1:-2.36686121165;NFY{A,B,C}:-2.48001614935;YY1:-2.48197780544;PBX1:-2.48821924873;LHX3,4:-2.64153840148;HAND1,2:-2.71457709503;GFI1:-2.7360234283;NRF1:-2.78062441828;ZNF143:-3.21365850472;LEF1_TCF7_TCF7L1,2:-3.43315726121 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11869-125B6;search_select_hide=table117:FF:11869-125B6 | |||
}} | }} |
Latest revision as of 18:25, 4 June 2020
Name: | CD14+ monocytes - treated with B-glucan, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13474 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13474
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13474
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.118 |
10 | 10 | 0.0212 |
100 | 100 | 0.899 |
101 | 101 | 0.849 |
102 | 102 | 0.726 |
103 | 103 | 0.273 |
104 | 104 | 0.562 |
105 | 105 | 0.182 |
106 | 106 | 5.28675e-4 |
107 | 107 | 0.168 |
108 | 108 | 0.935 |
109 | 109 | 0.241 |
11 | 11 | 0.136 |
110 | 110 | 0.24 |
111 | 111 | 0.0283 |
112 | 112 | 0.305 |
113 | 113 | 0.517 |
114 | 114 | 0.0107 |
115 | 115 | 0.23 |
116 | 116 | 0.786 |
117 | 117 | 0.0415 |
118 | 118 | 0.179 |
119 | 119 | 0.123 |
12 | 12 | 0.311 |
120 | 120 | 0.948 |
121 | 121 | 0.623 |
122 | 122 | 0.7 |
123 | 123 | 0.0762 |
124 | 124 | 0.544 |
125 | 125 | 0.374 |
126 | 126 | 0.171 |
127 | 127 | 0.358 |
128 | 128 | 0.0241 |
129 | 129 | 0.447 |
13 | 13 | 0.154 |
130 | 130 | 0.16 |
131 | 131 | 0.76 |
132 | 132 | 0.0719 |
133 | 133 | 0.805 |
134 | 134 | 0.495 |
135 | 135 | 0.584 |
136 | 136 | 0.934 |
137 | 137 | 0.0121 |
138 | 138 | 0.269 |
139 | 139 | 0.0385 |
14 | 14 | 0.433 |
140 | 140 | 0.117 |
141 | 141 | 0.266 |
142 | 142 | 0.0907 |
143 | 143 | 0.0157 |
144 | 144 | 0.564 |
145 | 145 | 0.365 |
146 | 146 | 0.545 |
147 | 147 | 0.544 |
148 | 148 | 0.00776 |
149 | 149 | 0.651 |
15 | 15 | 0.169 |
150 | 150 | 0.463 |
151 | 151 | 0.333 |
152 | 152 | 0.157 |
153 | 153 | 0.514 |
154 | 154 | 0.635 |
155 | 155 | 0.619 |
156 | 156 | 0.528 |
157 | 157 | 0.368 |
158 | 158 | 0.038 |
159 | 159 | 0.473 |
16 | 16 | 0.319 |
160 | 160 | 0.373 |
161 | 161 | 0.521 |
162 | 162 | 0.412 |
163 | 163 | 0.14 |
164 | 164 | 0.073 |
165 | 165 | 0.196 |
166 | 166 | 0.614 |
167 | 167 | 0.219 |
168 | 168 | 0.263 |
169 | 169 | 0.00637 |
17 | 17 | 0.164 |
18 | 18 | 0.113 |
19 | 19 | 0.336 |
2 | 2 | 0.838 |
20 | 20 | 0.284 |
21 | 21 | 0.525 |
22 | 22 | 0.242 |
23 | 23 | 0.042 |
24 | 24 | 0.322 |
25 | 25 | 0.425 |
26 | 26 | 0.035 |
27 | 27 | 0.795 |
28 | 28 | 0.458 |
29 | 29 | 0.24 |
3 | 3 | 0.0916 |
30 | 30 | 0.49 |
31 | 31 | 0.714 |
32 | 32 | 0.933 |
33 | 33 | 0.334 |
34 | 34 | 0.547 |
35 | 35 | 0.116 |
36 | 36 | 0.124 |
37 | 37 | 0.0729 |
38 | 38 | 0.348 |
39 | 39 | 0.782 |
4 | 4 | 0.975 |
40 | 40 | 0.172 |
41 | 41 | 0.00682 |
42 | 42 | 0.378 |
43 | 43 | 0.0315 |
44 | 44 | 0.942 |
45 | 45 | 0.672 |
46 | 46 | 0.14 |
47 | 47 | 0.518 |
48 | 48 | 0.439 |
49 | 49 | 0.106 |
5 | 5 | 0.259 |
50 | 50 | 0.969 |
51 | 51 | 0.398 |
52 | 52 | 0.315 |
53 | 53 | 0.391 |
54 | 54 | 0.339 |
55 | 55 | 0.43 |
56 | 56 | 0.607 |
57 | 57 | 0.814 |
58 | 58 | 0.141 |
59 | 59 | 0.134 |
6 | 6 | 0.541 |
60 | 60 | 0.0447 |
61 | 61 | 0.636 |
62 | 62 | 0.0649 |
63 | 63 | 0.472 |
64 | 64 | 0.4 |
65 | 65 | 0.206 |
66 | 66 | 0.212 |
67 | 67 | 0.454 |
68 | 68 | 0.666 |
69 | 69 | 0.556 |
7 | 7 | 0.275 |
70 | 70 | 0.0219 |
71 | 71 | 0.0285 |
72 | 72 | 0.283 |
73 | 73 | 0.134 |
74 | 74 | 0.0798 |
75 | 75 | 0.0915 |
76 | 76 | 0.181 |
77 | 77 | 0.401 |
78 | 78 | 0.102 |
79 | 79 | 0.344 |
8 | 8 | 0.336 |
80 | 80 | 0.311 |
81 | 81 | 0.364 |
82 | 82 | 0.107 |
83 | 83 | 0.0518 |
84 | 84 | 0.233 |
85 | 85 | 0.0115 |
86 | 86 | 0.051 |
87 | 87 | 0.523 |
88 | 88 | 0.641 |
89 | 89 | 0.164 |
9 | 9 | 0.37 |
90 | 90 | 0.0615 |
91 | 91 | 0.313 |
92 | 92 | 0.219 |
93 | 93 | 0.579 |
94 | 94 | 0.0399 |
95 | 95 | 0.315 |
96 | 96 | 0.36 |
97 | 97 | 0.809 |
98 | 98 | 0.109 |
99 | 99 | 0.0996 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13474
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011102 human CD14-positive monocytes - treated with B-glucan sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000630 (beta-glucan treatment sample)
0011102 (human CD14-positive monocytes - treated with B-glucan sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)