CL:0000589: Difference between revisions
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|located_in= | |located_in= | ||
|name=cochlear inner hair cell | |name=cochlear inner hair cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002227 | |part_of=UBERON:0002227 | ||
Latest revision as of 16:35, 12 September 2014
| Name: | cochlear inner hair cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A bulbous cell that is medially placed in one row in the organ of Corti. In contrast to the outer hair cells, the inner hair cells are fewer in number, have fewer sensory hairs, and are less differentiated." [MESH:A.08.663.650.250.250] | ||
| Xrefs: |
| ||
| Synonyms: | "inner hair cell" BROAD [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000202(auditory hair cell) |
|---|---|
| part_of: | UBERON:0002227(spiral organ of cochlea) |
Children
| derives from: | FF:0000264 (mouse inner hair cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000589 (cochlear inner hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_ee9328411b3f99b904159f500e945747 | p@chr5:72652671..72652676, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_ee9328411b3f99b904159f500e945747 | p@chr6:36966993..36966996, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_ee9328411b3f99b904159f500e945747 | p@chr3:127520184..127520191, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_ee9328411b3f99b904159f500e945747 | p@chr6:36966723..36966734, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_ee9328411b3f99b904159f500e945747 | p@chr9:87599703..87599714, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684505..64684512, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_ee9328411b3f99b904159f500e945747 | p@chr8:94283075..94283082, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_ee9328411b3f99b904159f500e945747 | p@chr9:87599703..87599714, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_ee9328411b3f99b904159f500e945747 | p11@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_ee9328411b3f99b904159f500e945747 | p7@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_ee9328411b3f99b904159f500e945747 | p@chr15:91379135..91379143, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_ee9328411b3f99b904159f500e945747 | p@chr19:10535924..10535927, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_ee9328411b3f99b904159f500e945747 | p@chr2:142906965..142906982, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_ee9328411b3f99b904159f500e945747 | p@chr2:53464193..53464197, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_ee9328411b3f99b904159f500e945747 | p@chr11:94371110..94371111, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_ee9328411b3f99b904159f500e945747 | p@chr2:53464193..53464197, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_ee9328411b3f99b904159f500e945747 | p@chr6:36966993..36966996, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_ee9328411b3f99b904159f500e945747 | p@chr18:66033513..66033517, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_ee9328411b3f99b904159f500e945747 | p@chr4:106770202..106770208, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684637..64684654, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684637..64684654, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_ee9328411b3f99b904159f500e945747 | p@chr2:12032746..12032751, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_ee9328411b3f99b904159f500e945747 | p8@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_ee9328411b3f99b904159f500e945747 | p@chr18:66033513..66033517, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_ee9328411b3f99b904159f500e945747 | p10@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_ee9328411b3f99b904159f500e945747 | p@chr2:142907424..142907448, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_ee9328411b3f99b904159f500e945747 | p@chr13:31171742..31171745, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_ee9328411b3f99b904159f500e945747 | p@chr15:91379135..91379143, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_ee9328411b3f99b904159f500e945747 | p1@Zpld1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_ee9328411b3f99b904159f500e945747 | p@chr15:97828021..97828028, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684692..64684697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684692..64684697, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_ee9328411b3f99b904159f500e945747 | p@chr2:180335744..180335746, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_ee9328411b3f99b904159f500e945747 | p1@Zpld1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_ee9328411b3f99b904159f500e945747 | p@chr10:18246142..18246145, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_ee9328411b3f99b904159f500e945747 | p11@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_ee9328411b3f99b904159f500e945747 | p@chr5:72652671..72652676, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_ee9328411b3f99b904159f500e945747 | p@chr4:106770202..106770208, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_ee9328411b3f99b904159f500e945747 | p@chr19:10535924..10535927, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_ee9328411b3f99b904159f500e945747 | p7@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_ee9328411b3f99b904159f500e945747 | p@chr2:142906965..142906982, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_ee9328411b3f99b904159f500e945747 | p@chr13:31171742..31171745, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_ee9328411b3f99b904159f500e945747 | p24@Dctn1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_ee9328411b3f99b904159f500e945747 | p@chr10:18246142..18246145, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_ee9328411b3f99b904159f500e945747 | p3@Plscr5 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_ee9328411b3f99b904159f500e945747 | p@chr11:114652018..114652020, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_ee9328411b3f99b904159f500e945747 | p@chr6:36966723..36966734, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_ee9328411b3f99b904159f500e945747 | p3@Plscr5 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_ee9328411b3f99b904159f500e945747 | p8@Col11a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_ee9328411b3f99b904159f500e945747 | p@chr15:97828021..97828028, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_ee9328411b3f99b904159f500e945747 | p@chr11:94371110..94371111, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_ee9328411b3f99b904159f500e945747 | p@chr8:94283075..94283082, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_ee9328411b3f99b904159f500e945747 | p@chr3:127520184..127520191, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_ee9328411b3f99b904159f500e945747 | p@chr2:12032746..12032751, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_ee9328411b3f99b904159f500e945747 | p24@Dctn1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_ee9328411b3f99b904159f500e945747 | p@chr17:15466888..15466898, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_ee9328411b3f99b904159f500e945747 | p10@Col11a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_ee9328411b3f99b904159f500e945747 | p@chr2:142907424..142907448, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_ee9328411b3f99b904159f500e945747 | p@chr6:64684505..64684512, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_ee9328411b3f99b904159f500e945747 | p@chr17:15466888..15466898, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_ee9328411b3f99b904159f500e945747 | p@chr11:114652018..114652020, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_ee9328411b3f99b904159f500e945747 | p@chr2:180335744..180335746, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr1:172843796..172843799, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr5:147854240..147854249, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr1:172843796..172843799, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr11:11599532..11599539, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr6:86746562..86746579, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr15:97806034..97806061, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr4:133802857..133802884, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr14:31283085..31283097, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_fd0bf386598054188f3f1be4ae0659c5 | p2@Strc |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr3:58626291..58626298, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr12:13572961..13572974, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_fd0bf386598054188f3f1be4ae0659c5 | p1@Tmc1 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr16:93971357..93971363, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr13:58283583..58283607, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr2:53464178..53464186, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr5:3909310..3909321, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_fd0bf386598054188f3f1be4ae0659c5 | p10@Otof |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr3:154693281..154693317, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr11:89702580..89702593, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_fd0bf386598054188f3f1be4ae0659c5 | p2@Gm1322 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_fd0bf386598054188f3f1be4ae0659c5 | p21@Espn |
| 2.74e-44 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr12:13508046..13508055, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_fd0bf386598054188f3f1be4ae0659c5 | p@chr11:94371127..94371139, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_fd0bf386598054188f3f1be4ae0659c5 | p2@Tmprss3 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr2:53464178..53464186, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr13:78257454..78257465, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_fd0bf386598054188f3f1be4ae0659c5 | p3@Kncn |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr1:78523144..78523177, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_fd0bf386598054188f3f1be4ae0659c5 | p12@B3galt5 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_fd0bf386598054188f3f1be4ae0659c5 | p3@Kncn |
| 2.74e-44 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr15:89215319..89215330, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_fd0bf386598054188f3f1be4ae0659c5 | p4@Chrna10 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr10:67371994..67372010, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr17:13983102..13983126, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr13:78257454..78257465, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr1:182528371..182528385, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_fd0bf386598054188f3f1be4ae0659c5 | p2@Fscn2 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_fd0bf386598054188f3f1be4ae0659c5 | p@chr3:154459231..154459240, + |
