CL:0000710: Difference between revisions
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|located_in= | |located_in= | ||
|name=neurecto-epithelial cell | |name=neurecto-epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:36, 12 September 2014
| Name: | neurecto-epithelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Epithelial cells derived from neural plate and neural crest." [GOC:tfm, http://63.198.234.228/OpenFMA/Neurecto-epithelial%20cell.html] | ||
| Xrefs: |
| ||
| Synonyms: | "neuroepithelial cell" BROAD [] | ||
| Comments: | The term "neuroepithelial cell" is used to describe both this cell type and sensory epithelial cell (CL:0000098). |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000075(columnar/cuboidal epithelial cell),CL:0002077(ecto-epithelial cell) |
|---|---|
| develops_from: | CL:0000133(neurectodermal cell) |
Children
| is a: | CL:0000148 (melanocyte),CL:0000165 (neuroendocrine cell),CL:0000541 (melanoblast),CL:0002167 (olfactory epithelial cell),CL:0002304 (non-pigmented ciliary epithelial cell),CL:0002379 (meningothelial cell),CL:0005014 (auditory epithelial support cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10691-109F7 (meningioma cell line:HKBMM)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11351-117H1 (Melanocyte - light, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11423-118G1 (Melanocyte - light, donor3)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11581-120F6
- 11582-120F7 (Melanocyte - dark, donor2)
... further results Mouse (Mus musculus)
- 10691-109F7 (meningioma cell line:HKBMM)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11351-117H1 (Melanocyte - light, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11423-118G1 (Melanocyte - light, donor3)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11581-120F6
- 11582-120F7 (Melanocyte - dark, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000710 (neurecto-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:77109269..77109270, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p1@ENSMUST00000154065 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr4:151450365..151450374, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:77109269..77109270, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p17@Tsga14 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42139059..42139081, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:113939859..113939865, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42147036..42147053, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p1@ENSMUST00000154065 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102298599..102298602, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:55289275..55289297, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p5@Egfl8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:48406009..48406013, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:113939919..113939925, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:62578740..62578749, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:119912363..119912365, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:94418515..94418518, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102291551..102291553, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:24310748..24310749, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:55289275..55289297, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:48406009..48406013, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p17@Tsga14 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:23001562..23001563, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:77109306..77109314, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:77109306..77109314, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102291443..102291451, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr6:30620092..30620097, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42147036..42147053, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p14@Tecta |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p2@Otoa |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:113939919..113939925, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42202683..42202684, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:97112452..97112459, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p19@Aatk |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:24310748..24310749, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:23001562..23001563, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p16@Tsga14 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:55269566..55269577, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:92800684..92800687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr4:151450310..151450318, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr6:30620092..30620097, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p6@Otogl |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102298599..102298602, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p14@Tecta |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42202683..42202684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:97112452..97112459, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:55269566..55269577, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:119912363..119912365, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p16@Tsga14 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:55270369..55270394, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p6@Otogl |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:92800735..92800736, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr4:151450365..151450374, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p5@Egfl8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:92800684..92800687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:62578740..62578749, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:94418486..94418491, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p5@Epyc |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102291551..102291553, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr14:102291443..102291451, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr19:55270369..55270394, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p2@Otoa |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p22@Gas2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr4:151450310..151450318, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p5@Epyc |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p22@Gas2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:92800735..92800736, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr9:42139059..42139081, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:67372807..67372809, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr10:67372807..67372809, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:94418515..94418518, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr5:113939859..113939865, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p@chr15:94418486..94418491, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_438f5e8636f29feb6f8ac5f1fafb0977 | p19@Aatk |
| 1.05e-69 | FFCP PHASE2:Hg19::chrX:9707625..9707629,-#_3ecf043c2d012ef1bb7b18c995cc32e9 | p6@GPR143 |
| 1.05e-69 | FFCP PHASE1:Hg19::chrX:9707625..9707629,-#_3ecf043c2d012ef1bb7b18c995cc32e9 | p6@GPR143 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12702367..12702377,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12702367..12702377, + |
| 7.68e-69 | FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p1@ENST00000380106 |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12709332..12709345,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12709332..12709345, + |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12708060..12708071,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12708060..12708071, - |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12702367..12702377,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12702367..12702377, + |
| 7.68e-69 | FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr16:89986251..89986268, + |
| 7.68e-69 | FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr16:89986251..89986268, + |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12693291..12693298,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p33@TYRP1 |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12693291..12693298,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p33@TYRP1 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p1@AK129493 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p11@IL6R |
| 7.68e-69 | FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p1@AK129493 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12708978..12708990, + |
| 7.68e-69 | FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p7@MFSD12 |
| 7.68e-69 | FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p11@IL6R |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12708978..12708990,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12708978..12708990, + |
| 7.68e-69 | FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p7@MFSD12 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12695585..12695593,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p24@TYRP1 |
| 7.68e-69 | FFCP PHASE1:Hg19::chr9:12695585..12695593,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p24@TYRP1 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12709332..12709345,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12709332..12709345, + |
| 7.68e-69 | FFCP PHASE2:Hg19::chr6:4610902..4610913,+#_d3ced7d0b3a9c0e9866a66c0cc80070d | p1@ENST00000380106 |
| 7.68e-69 | FFCP PHASE2:Hg19::chr9:12708060..12708071,-#_d3ced7d0b3a9c0e9866a66c0cc80070d | p@chr9:12708060..12708071, - |
| 3.68e-65 | FFCP PHASE1:Hg19::chr17:505227..505267,-#_2c5c29630e723c41f0cda757d6e31b13 | p@chr17:505227..505267, - |
| 3.68e-65 | FFCP PHASE2:Hg19::chr17:505227..505267,-#_2c5c29630e723c41f0cda757d6e31b13 | p@chr17:505227..505267, - |
