UBERON:0000997: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=mammalian vulva | |name=mammalian vulva | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0005056 | |part_of=UBERON:0005056 | ||
Latest revision as of 17:13, 12 September 2014
| Name: | mammalian vulva | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "external genital organs of the female mammal[WP]." [Wikipedia:Vulva] | ||
| Xrefs: |
| ||
| Synonyms: |
"female pudendum" EXACT [FMA:20462] "female pudendum" EXACT [BTO:0003101] "mammalian vulva" EXACT [] "puboperineal region" EXACT [FMA:20462] "pudendum femininum" EXACT [FMA:20462, FMA:TA] "pudendum femininum" RELATED LATIN [Wikipedia:Vulva] "skin of female pudendum" EXACT [] "skin of vulva" EXACT [] "vulva" EXACT [MA:0000395] | ||
| Comments: | editor note: todo - add pudendum | ||
| Alt_id: | UBERON:FBbt_00004926-FMA_20462-FMA_225311-MA_0000395-MIAA_0000169-WBbt_0006748 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ),UBERON:0005156(reproductive structure),UBERON:0014404(female anatomical structure) |
|---|---|
| part_of: | UBERON:0005056(external female genitalia) |
Children
| derives from: | FF:0100017 (A-431 cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10426-106D3 (epidermoid carcinoma cell line:A431)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000997 (mammalian vulva), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:39678082..39678085,-#_59c701e7152de2a14708c87d4b6b3759 | p15@KRT15 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:51512580..51512608,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr19:51512580..51512608, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:23975557..23975561,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr4:23975557..23975561, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:135687993..135687996,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr9:135687993..135687996, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:43706592..43706595,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr6:43706592..43706595, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:72258505..72258535,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr2:72258505..72258535, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:69988499..69988503,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr11:69988499..69988503, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:84943573..84943591,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr5:84943573..84943591, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:39678082..39678085,-#_59c701e7152de2a14708c87d4b6b3759 | p15@KRT15 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:55088621..55088630,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr7:55088621..55088630, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:69988499..69988503,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr11:69988499..69988503, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:51512580..51512608,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr19:51512580..51512608, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:135687993..135687996,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr9:135687993..135687996, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:43706592..43706595,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr6:43706592..43706595, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:72258505..72258535,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr2:72258505..72258535, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:84943573..84943591,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr5:84943573..84943591, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:55088621..55088630,+#_59c701e7152de2a14708c87d4b6b3759 | p@chr7:55088621..55088630, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:23975557..23975561,-#_59c701e7152de2a14708c87d4b6b3759 | p@chr4:23975557..23975561, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:222131869..222131874,+#_cb54ae763aff96140d22aba36b2ac662 | p@chr1:222131869..222131874, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24133915..24133919,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24133915..24133919, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24233822..24233825,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24233822..24233825, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:209980124..209980125,+#_cb54ae763aff96140d22aba36b2ac662 | p@chr1:209980124..209980125, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24105215..24105219,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24105215..24105219, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24188430..24188435,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24188430..24188435, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24125531..24125534,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24125531..24125534, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:209980124..209980125,+#_cb54ae763aff96140d22aba36b2ac662 | p@chr1:209980124..209980125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24105215..24105219,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24105215..24105219, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:222131869..222131874,+#_cb54ae763aff96140d22aba36b2ac662 | p@chr1:222131869..222131874, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24133915..24133919,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24133915..24133919, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24233822..24233825,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24233822..24233825, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24125531..24125534,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24125531..24125534, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24188430..24188435,-#_cb54ae763aff96140d22aba36b2ac662 | p@chr4:24188430..24188435, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:55141834..55141838,-#_fa9e7d99d795447c66e16d1bce87e2ae | p@chr7:55141834..55141838, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:55141834..55141838,-#_fa9e7d99d795447c66e16d1bce87e2ae | p@chr7:55141834..55141838, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:24100907..24100911,-#_f0b6609b08c0115f324da7f893693cd8 | p@chr4:24100907..24100911, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:23981805..23981809,-#_f0b6609b08c0115f324da7f893693cd8 | p@chr4:23981805..23981809, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_f0b6609b08c0115f324da7f893693cd8 | p1@ENST00000457815 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:24100907..24100911,-#_f0b6609b08c0115f324da7f893693cd8 | p@chr4:24100907..24100911, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_f0b6609b08c0115f324da7f893693cd8 | p1@ENST00000457815 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:23981805..23981809,-#_f0b6609b08c0115f324da7f893693cd8 | p@chr4:23981805..23981809, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:159149368..159149371,-#_ad6cb382664ad28f38980fe911a4303d | p@chr6:159149368..159149371, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:23330592..23330593,-#_ad6cb382664ad28f38980fe911a4303d | p@chr1:23330592..23330593, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:39675882..39675894,-#_ad6cb382664ad28f38980fe911a4303d | p@chr17:39675882..39675894, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:159149368..159149371,-#_ad6cb382664ad28f38980fe911a4303d | p@chr6:159149368..159149371, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:23330592..23330593,-#_ad6cb382664ad28f38980fe911a4303d | p@chr1:23330592..23330593, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:39675882..39675894,-#_ad6cb382664ad28f38980fe911a4303d | p@chr17:39675882..39675894, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_5b0596b8381e3081eb7761033ed228e1 | p8@SERPINB13 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_5b0596b8381e3081eb7761033ed228e1 | p8@SERPINB13 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p3@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:27192983..27192986,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr1:27192983..27192986, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:209945709..209945715,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr1:209945709..209945715, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr16:3041330..3041336,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr16:3041330..3041336, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr20:46473115..46473124,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr20:46473115..46473124, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:154497207..154497243,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr7:154497207..154497243, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:27192983..27192986,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr1:27192983..27192986, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr16:3041330..3041336,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr16:3041330..3041336, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p4@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p3@MYH16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr20:46473115..46473124,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr20:46473115..46473124, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_e6f6dd326764ebcfe866aa5fa7694ce9 | p4@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:209945709..209945715,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr1:209945709..209945715, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:154497207..154497243,-#_e6f6dd326764ebcfe866aa5fa7694ce9 | p@chr7:154497207..154497243, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:47009992..47009993,-#_63a85859dcf7a5cfc555a190681d53b2 | p4@GPR110 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:61586483..61586487,+#_63a85859dcf7a5cfc555a190681d53b2 | p@chr18:61586483..61586487, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr15:92484587..92484596,+#_63a85859dcf7a5cfc555a190681d53b2 | p14@SLCO3A1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:47009992..47009993,-#_63a85859dcf7a5cfc555a190681d53b2 | p4@GPR110 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:61586483..61586487,+#_63a85859dcf7a5cfc555a190681d53b2 | p@chr18:61586483..61586487, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr15:92484587..92484596,+#_63a85859dcf7a5cfc555a190681d53b2 | p14@SLCO3A1 |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:55270422..55270434,+#_9845ffc1b9206a0e73808a351c806c79 | p@chr7:55270422..55270434, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:55149426..55149432,+#_9845ffc1b9206a0e73808a351c806c79 | p@chr7:55149426..55149432, + |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:55270422..55270434,+#_9845ffc1b9206a0e73808a351c806c79 | p@chr7:55270422..55270434, + |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:55149426..55149432,+#_9845ffc1b9206a0e73808a351c806c79 | p@chr7:55149426..55149432, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr7:4722965..4723005,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr7:4722965..4723005, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr8:143866652..143866665,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr8:143866652..143866665, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr7:4722965..4723005,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr7:4722965..4723005, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:39675950..39675974,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr17:39675950..39675974, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr8:143866652..143866665,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr8:143866652..143866665, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:39675950..39675974,-#_ed932e3bb47b318b7ba539c926d4f0d1 | p@chr17:39675950..39675974, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_1d7a4dfec50c20839f8f5bfade6f138c | p8@ALDH1A3 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr3:50308296..50308307,+#_1d7a4dfec50c20839f8f5bfade6f138c | p9@SEMA3B |
| 2.21e-40 | FFCP PHASE1:Hg19::chr3:50308296..50308307,+#_1d7a4dfec50c20839f8f5bfade6f138c | p9@SEMA3B |
| 2.21e-40 | FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_1d7a4dfec50c20839f8f5bfade6f138c | p8@ALDH1A3 |
| 3.3e-40 | FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_3e7e06500e00c031799a915ecbf83df0 | p@chr17:2264983..2264992, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr2:165650899..165650926,-#_3e7e06500e00c031799a915ecbf83df0 | p@chr2:165650899..165650926, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_3e7e06500e00c031799a915ecbf83df0 | p@chr17:2264983..2264992, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr2:165650899..165650926,-#_3e7e06500e00c031799a915ecbf83df0 | p@chr2:165650899..165650926, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr7:55053540..55053550,+#_07e420f3dd56871d9cf7587febc54cf5 | p@chr7:55053540..55053550, + |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:24208460..24208464,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr4:24208460..24208464, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:143814432..143814436,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr8:143814432..143814436, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:24232569..24232574,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr4:24232569..24232574, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:24208460..24208464,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr4:24208460..24208464, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:143814432..143814436,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr8:143814432..143814436, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr7:55053540..55053550,+#_07e420f3dd56871d9cf7587febc54cf5 | p@chr7:55053540..55053550, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:24232569..24232574,-#_07e420f3dd56871d9cf7587febc54cf5 | p@chr4:24232569..24232574, - |
| 2.58e-34 | FFCP PHASE2:Hg19::chr7:98822527..98822533,+#_41605380495fff3d869da4630bcc4a03 | p@chr7:98822527..98822533, + |
| 2.58e-34 | FFCP PHASE2:Hg19::chr2:173374596..173374600,+#_41605380495fff3d869da4630bcc4a03 | p@chr2:173374596..173374600, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr7:98822527..98822533,+#_41605380495fff3d869da4630bcc4a03 | p@chr7:98822527..98822533, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr2:173374596..173374600,+#_41605380495fff3d869da4630bcc4a03 | p@chr2:173374596..173374600, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr1:183178134..183178138,+#_a0c846dac9e8422476b42df7e762f2d0 | p@chr1:183178134..183178138, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr1:183178134..183178138,+#_a0c846dac9e8422476b42df7e762f2d0 | p@chr1:183178134..183178138, + |
