FFCP PHASE1:Mm9::chr16:24733721..24733736,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:24733721..24733736,+
|short_description=p@chr16:24733721..24733736,+
|description=CAGE_peak_at_chr16:24733721..24733736,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=315 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:24733721..24733736,+ | |||
|description=CAGE_peak_at_chr16:24733721..24733736,+ | |||
|id=chr16:24733721..24733736,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.64e-22!6;CL:0000183!1.64e-22!6;CL:0000187!1.64e-22!6;CL:0000056!1.64e-22!6;CL:0000222!3.15e-19!7;CL:0000355!7.63e-15!9;CL:0002293!4.32e-13!3;CL:0002494!4.27e-12!3;CL:0000737!4.27e-12!3;CL:0000746!4.27e-12!3;CL:0000513!4.27e-12!3;CL:0000192!4.65e-12!3;CL:0000359!4.65e-12!3;CL:0002539!4.65e-12!3;CL:0000514!4.65e-12!3;CL:0000548!1.35e-08!115;CL:0000004!1.35e-08!115;CL:0000255!1.35e-08!115;CL:0002371!2.74e-08!118;CL:0000144!5.40e-08!121;CL:0000012!5.40e-08!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,7.38e-28,3;CL:0000680,1.50e-13,6;CL:0000187,1.50e-13,6;CL:0000056,1.50e-13,6;CL:0002494,1.86e-12,3;CL:0000737,1.86e-12,3;CL:0000746,1.86e-12,3;CL:0000513,1.86e-12,3;CL:0000222,1.04e-11,7;CL:0000355,3.03e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.63e-15!9;UBERON:0002036!7.63e-15!9;UBERON:0002385!7.63e-15!9;UBERON:0000486!7.63e-15!9;UBERON:0001015!7.63e-15!9;UBERON:0004290!7.63e-15!9;UBERON:0003082!7.63e-15!9;UBERON:0000383!2.63e-13!10;UBERON:0001135!4.65e-12!3;UBERON:0004237!4.65e-12!3;UBERON:0004695!4.65e-12!3;UBERON:0002111!4.65e-12!3;UBERON:0004178!4.65e-12!3;UBERON:0002329!4.76e-12!11;UBERON:0003077!4.76e-12!11;UBERON:0003059!4.76e-12!11;UBERON:0007282!4.76e-12!11;UBERON:0009618!4.76e-12!11;UBERON:0007285!4.76e-12!11;UBERON:0000947!3.68e-09!4;UBERON:0001637!3.68e-09!4;UBERON:0003509!3.68e-09!4;UBERON:0004573!3.68e-09!4;UBERON:0004571!3.68e-09!4;UBERON:0010191!3.68e-09!4;UBERON:0004572!3.68e-09!4;UBERON:0000914!1.35e-07!17;UBERON:0000055!2.06e-07!5;UBERON:0001981!2.06e-07!5;UBERON:0002049!2.06e-07!5;UBERON:0007500!2.06e-07!5;UBERON:0007798!2.06e-07!5;UBERON:0004537!2.06e-07!5;UBERON:0006965!2.06e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.03e-09,9;UBERON:0002036,3.03e-09,9;UBERON:0002385,3.03e-09,9;UBERON:0000486,3.03e-09,9;UBERON:0007503,3.03e-09,9;UBERON:0001015,3.03e-09,9;UBERON:0002329,3.03e-09,9;UBERON:0003082,3.03e-09,9;UBERON:0003059,3.03e-09,9;UBERON:0007282,3.03e-09,9;UBERON:0004290,3.03e-09,9;UBERON:0009618,3.03e-09,9;UBERON:0000383,2.22e-08,10;UBERON:0007524,1.14e-07,11;UBERON:0003077,1.14e-07,11;UBERON:0007285,1.14e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.304130793658544,1.10128051297009,0,0,0,0.194429899074283,0,0,0,0,0,3.08711323243136,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,3.91989741929533,1.03914401841148,1.7666978725517,0,17.9657068380045,5.09610479413291,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13115428989678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.304130793658544,1.10128051297009,0,0,0,0.194429899074283,0,0,0,0,0,3.08711323243136,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,3.91989741929533,1.03914401841148,1.7666978725517,0,17.9657068380045,5.09610479413291,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13115428989678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:24733721..24733736,+ | |||
}} | }} |
Latest revision as of 06:03, 6 August 2015
Short description: | p@chr16:24733721..24733736, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:24733721..24733736, + |
Coexpression cluster: | MCL_coexpression_mm9:315 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 7.38e-28 | 3 |
muscle precursor cell | 1.50e-13 | 6 |
muscle cell | 1.50e-13 | 6 |
myoblast | 1.50e-13 | 6 |
cardiocyte | 1.86e-12 | 3 |
striated muscle cell | 1.86e-12 | 3 |
cardiac muscle cell | 1.86e-12 | 3 |
cardiac muscle myoblast | 1.86e-12 | 3 |
mesodermal cell | 1.04e-11 | 7 |
multi-potent skeletal muscle stem cell | 3.03e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.03e-09 | 9 |
striated muscle tissue | 3.03e-09 | 9 |
muscle tissue | 3.03e-09 | 9 |
multilaminar epithelium | 3.03e-09 | 9 |
epithelial vesicle | 3.03e-09 | 9 |
musculature | 3.03e-09 | 9 |
somite | 3.03e-09 | 9 |
myotome | 3.03e-09 | 9 |
presomitic mesoderm | 3.03e-09 | 9 |
presumptive segmental plate | 3.03e-09 | 9 |
dermomyotome | 3.03e-09 | 9 |
trunk paraxial mesoderm | 3.03e-09 | 9 |
musculature of body | 2.22e-08 | 10 |
dense mesenchyme tissue | 1.14e-07 | 11 |
paraxial mesoderm | 1.14e-07 | 11 |
presumptive paraxial mesoderm | 1.14e-07 | 11 |