Personal tools

FFCP PHASE1:Mm9::chr18:37460464..37460489,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr18:37460464..37460489,+ |short_description=p1@Pcdhb3 |description=CAGE_peak_1_at_Pcdhb3_5end |association_with_transcript=11bp_to_ENSMUST00000051754,NM_05312...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:37460464..37460489,+
|DHSsupport=NA
|short_description=p1@Pcdhb3
|DPIdataset=NA
|description=CAGE_peak_1_at_Pcdhb3_5end
|association_with_transcript=11bp_to_ENSMUST00000051754,NM_053128,uc008epo.1_5end
|EntrezGene=93874
|EntrezGene=93874
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q91XZ7
|UniProt=Q91XZ7
|association_with_transcript=11bp_to_ENSMUST00000051754,NM_053128,uc008epo.1_5end
|cluster_id=chr18:37460464..37460489,+
|description=CAGE_peak_1_at_Pcdhb3_5end
|id=chr18:37460464..37460489,+
|ontology_enrichment_celltype=CL:0000540!3.46e-14!33;CL:0000047!3.46e-14!33;CL:0000031!3.46e-14!33;CL:0000404!3.46e-14!33;CL:0000393!2.77e-12!39;CL:0000211!2.77e-12!39;CL:0000117!6.67e-12!23;CL:0000337!6.67e-12!23;CL:0000221!1.51e-11!44;CL:0000133!1.51e-11!44;CL:0002319!2.46e-11!43;CL:0000055!1.27e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-21,23;CL:0000337,1.67e-21,23;CL:0000540,3.58e-18,33;CL:0000047,3.58e-18,33;CL:0000031,3.58e-18,33;CL:0000404,3.58e-18,33;CL:0000393,1.34e-16,39;CL:0000211,1.34e-16,39;CL:0002319,9.72e-15,43;CL:0000221,2.65e-14,44;CL:0000133,2.65e-14,44;CL:0002321,2.13e-08,70;CL:0002612,2.90e-08,3;CL:0002614,8.16e-08,3;CL:0002613,9.58e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.18e-20!75;UBERON:0001016!4.18e-20!75;UBERON:0001017!4.53e-19!73;UBERON:0005743!4.53e-19!73;UBERON:0004121!1.37e-18!102;UBERON:0000924!1.37e-18!102;UBERON:0006601!1.37e-18!102;UBERON:0002346!5.63e-15!71;UBERON:0003075!5.63e-15!71;UBERON:0007284!5.63e-15!71;UBERON:0001049!3.70e-14!52;UBERON:0005068!3.70e-14!52;UBERON:0006241!3.70e-14!52;UBERON:0007135!3.70e-14!52;UBERON:0000033!3.80e-13!63;UBERON:0002020!5.90e-12!34;UBERON:0003056!8.96e-12!49;UBERON:0000955!1.18e-11!50;UBERON:0006238!1.18e-11!50;UBERON:0002616!3.52e-11!49;UBERON:0003080!8.65e-11!40;UBERON:0002780!3.17e-10!39;UBERON:0001890!3.17e-10!39;UBERON:0006240!3.17e-10!39;UBERON:0004111!7.48e-09!122;UBERON:0002791!9.14e-09!29;UBERON:0003528!9.14e-09!29;UBERON:0001893!9.14e-09!29;UBERON:0000025!7.43e-08!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.80e-26,75;UBERON:0001017,2.20e-25,73;UBERON:0000073,1.82e-24,54;UBERON:0001049,6.00e-23,52;UBERON:0005068,6.00e-23,52;UBERON:0006241,6.00e-23,52;UBERON:0007135,6.00e-23,52;UBERON:0004121,7.63e-21,95;UBERON:0000924,7.63e-21,95;UBERON:0006601,7.63e-21,95;UBERON:0002346,4.01e-19,64;UBERON:0003075,4.01e-19,64;UBERON:0007284,4.01e-19,64;UBERON:0002020,6.12e-17,34;UBERON:0010371,5.11e-16,73;UBERON:0003076,9.97e-15,12;UBERON:0003057,9.97e-15,12;UBERON:0002240,1.19e-14,6;UBERON:0005174,1.19e-14,6;UBERON:0001137,1.19e-14,6;UBERON:0002616,6.38e-14,46;UBERON:0000955,1.57e-13,47;UBERON:0006238,1.57e-13,47;UBERON:0001948,8.16e-13,5;UBERON:0002315,8.16e-13,5;UBERON:0010314,1.32e-12,92;UBERON:0003080,1.85e-11,40;UBERON:0002420,2.77e-10,8;UBERON:0007245,2.77e-10,8;UBERON:0010009,2.77e-10,8;UBERON:0010011,2.77e-10,8;UBERON:0000454,2.77e-10,8;UBERON:0002780,2.97e-10,39;UBERON:0001890,2.97e-10,39;UBERON:0006240,2.97e-10,39;UBERON:0000025,6.08e-10,114;UBERON:0003056,6.64e-10,49;UBERON:0002950,8.45e-10,4;UBERON:0001891,8.45e-10,4;UBERON:0009616,8.45e-10,4;UBERON:0010286,8.45e-10,4;UBERON:0003528,2.14e-09,29;UBERON:0002791,2.14e-09,29;UBERON:0001893,2.14e-09,29;UBERON:0004111,7.06e-09,122;UBERON:0002257,2.90e-08,3;UBERON:0002038,8.16e-08,3;UBERON:0009663,8.16e-08,3;UBERON:0009661,8.16e-08,3;UBERON:0000125,8.16e-08,3;UBERON:0002308,8.16e-08,3;UBERON:0011216,3.31e-07,194
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,1.28629718017973,0.573066879877513,0,1.82084814773638,2.64495489636016,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,0,0.829516898467821,0.810035629990144,0.841299845405528,1.99955689082663,2.65042249141936,0.734944795289724,0.766763768145891,0,0,3.57524546638526,3.22573719838111,2.50583946687368,2.19570344645783,1.04182674111352,1.11673199600552,1.68828783009504,3.0559649555362,2.65165726926301,2.70506193518296,1.3047961207771,0.530083353332288,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.520455980298408,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,0,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0.125654352112864,2.60736480288415,1.27857728665165,2.0778804455956,0.973447578406546,0.712875546952214,0.248813941220186,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.476255494059295,0.384341160854549,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,1.39023624612799,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,2.3131894342054,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0,0.837531287209079,0.714130922658041,0.390267295715598,0.630540576424764,1.32878813789265,0.956728611944923,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,1.17211686592203,0,0,0.94652465824877,0,0.215423397732799,0.477937595905104,0.891194696329576,1.69845918473299,0.809621403349789,0.292255857911312,1.58115111178609,0.963963949265421,0.141940085208269,0.178065603667255,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,1.24138163549592,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0.238744688006273,0,0,1.29797711407357,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0,0.269728692769641,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.496375471371293,0,0.904118764344118,0.506868376472335,0.58678619322877,0.5208175393758,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.71853182343688,0,0.755393897389701,0,1.35096360967266,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.128050304809739,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0,0.463735671240843
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,1.28629718017973,0.573066879877513,0,1.82084814773638,2.64495489636016,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,0,0.829516898467821,0.810035629990144,0.841299845405528,1.99955689082663,2.65042249141936,0.734944795289724,0.766763768145891,0,0,3.57524546638526,3.22573719838111,2.50583946687368,2.19570344645783,1.04182674111352,1.11673199600552,1.68828783009504,3.0559649555362,2.65165726926301,2.70506193518296,1.3047961207771,0.530083353332288,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.520455980298408,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,0,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0.125654352112864,2.60736480288415,1.27857728665165,2.0778804455956,0.973447578406546,0.712875546952214,0.248813941220186,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.476255494059295,0.384341160854549,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,1.31517439456545,1.39023624612799,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0,2.3131894342054,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0.216138049874694,0.199141273254367,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0,0.837531287209079,0.714130922658041,0.390267295715598,0.630540576424764,1.32878813789265,0.956728611944923,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,1.17211686592203,0,0,0.94652465824877,0,0.215423397732799,0.477937595905104,0.891194696329576,1.69845918473299,0.809621403349789,0.292255857911312,1.58115111178609,0.963963949265421,0.141940085208269,0.178065603667255,0.977321756121456,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,1.24138163549592,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0.238744688006273,0,0,1.29797711407357,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0,0.269728692769641,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.496375471371293,0,0.904118764344118,0.506868376472335,0.58678619322877,0.5208175393758,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.71853182343688,0,0.755393897389701,0,1.35096360967266,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.128050304809739,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0,0.463735671240843
|short_description=p1@Pcdhb3
}}
}}

Latest revision as of 05:44, 27 September 2015

Short description:p1@Pcdhb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdhb3_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 11bp_to_ENSMUST00000051754, NM_053128, uc008epo.1_5end
EntrezGene:Pcdhb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcdhb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.80e-2675
central nervous system2.20e-2573
regional part of nervous system1.82e-2454
neural tube6.00e-2352
neural rod6.00e-2352
future spinal cord6.00e-2352
neural keel6.00e-2352
ectoderm-derived structure7.63e-2195
ectoderm7.63e-2195
presumptive ectoderm7.63e-2195
neurectoderm4.01e-1964
neural plate4.01e-1964
presumptive neural plate4.01e-1964
gray matter6.12e-1734
ecto-epithelium5.11e-1673
posterior neural tube9.97e-1512
chordal neural plate9.97e-1512
spinal cord1.19e-146
dorsal region element1.19e-146
dorsum1.19e-146
regional part of brain6.38e-1446
brain1.57e-1347
future brain1.57e-1347
regional part of spinal cord8.16e-135
gray matter of spinal cord8.16e-135
structure with developmental contribution from neural crest1.32e-1292
anterior neural tube1.85e-1140
basal ganglion2.77e-108
nuclear complex of neuraxis2.77e-108
aggregate regional part of brain2.77e-108
collection of basal ganglia2.77e-108
cerebral subcortex2.77e-108
regional part of forebrain2.97e-1039
forebrain2.97e-1039
future forebrain2.97e-1039
tube6.08e-10114
pre-chordal neural plate6.64e-1049
regional part of midbrain8.45e-104
midbrain8.45e-104
presumptive midbrain8.45e-104
midbrain neural tube8.45e-104
brain grey matter2.14e-0929
regional part of telencephalon2.14e-0929
telencephalon2.14e-0929
anatomical conduit7.06e-09122
ventral horn of spinal cord2.90e-083
substantia nigra8.16e-083
telencephalic nucleus8.16e-083
midbrain nucleus8.16e-083
neural nucleus8.16e-083
nucleus of brain8.16e-083
organ system subdivision3.31e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:37460464..37460489,%2B&oldid=4295404"