FFCP PHASE1:Mm9::chr18:81584437..81584438,+: Difference between revisions
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|id=chr18:81584437..81584438,+
|short_description=p@chr18:81584437..81584438,+
|description=CAGE_peak_at_chr18:81584437..81584438,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1051 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:81584437..81584438,+ | |||
|description=CAGE_peak_at_chr18:81584437..81584438,+ | |||
|id=chr18:81584437..81584438,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.01e-22!15;CL:0000066!1.84e-22!25;CL:0000239!8.13e-21!6;CL:0000677!8.13e-21!6;CL:0000212!8.13e-21!6;CL:0000584!8.13e-21!6;CL:0002563!1.81e-18!9;CL:0002251!1.81e-18!9;CL:0000075!8.91e-18!7;CL:0000223!1.28e-16!20;CL:0000068!1.77e-12!3;CL:0002202!1.77e-12!3;CL:0000069!1.77e-12!3;CL:0002632!1.77e-12!3;CL:0002368!1.77e-12!3;CL:0000307!1.77e-12!3;CL:0000377!1.77e-12!3;CL:0000473!7.46e-12!3;CL:0000627!7.46e-12!3;CL:0000682!7.46e-12!3;CL:0000063!5.43e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.57e-20,3;CL:0002202,2.57e-20,3;CL:0000069,2.57e-20,3;CL:0002632,2.57e-20,3;CL:0002368,2.57e-20,3;CL:0000307,2.57e-20,3;CL:0000377,2.57e-20,3;CL:0000066,1.79e-19,25;CL:0000682,3.07e-19,3;CL:0002076,6.24e-15,15;CL:0000223,3.97e-11,20;CL:0000239,8.96e-10,6;CL:0000677,8.96e-10,6;CL:0000584,8.96e-10,6;CL:0000473,1.38e-08,7;CL:0000075,1.87e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.86e-33!15;UBERON:0001242!5.17e-26!13;UBERON:0000060!5.17e-26!13;UBERON:0001262!5.17e-26!13;UBERON:0004786!5.17e-26!13;UBERON:0004923!8.76e-20!24;UBERON:0003350!1.81e-18!9;UBERON:0004808!1.81e-18!9;UBERON:0001277!1.81e-18!9;UBERON:0000485!5.76e-15!11;UBERON:0003126!1.77e-12!3;UBERON:0001005!1.77e-12!3;UBERON:0007196!1.77e-12!3;UBERON:0001558!1.77e-12!3;UBERON:0000331!7.46e-12!3;UBERON:0002116!7.46e-12!3;UBERON:0001204!7.46e-12!3;UBERON:0001168!7.46e-12!3;UBERON:0001962!6.41e-09!2;UBERON:0001961!6.41e-09!2;UBERON:0001744!6.41e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.57e-20,3;UBERON:0001005,2.57e-20,3;UBERON:0007196,2.57e-20,3;UBERON:0001558,2.57e-20,3;UBERON:0000344,3.79e-20,15;UBERON:0001962,3.36e-14,2;UBERON:0001961,3.36e-14,2;UBERON:0001744,3.36e-14,2;UBERON:0004923,2.08e-12,24;UBERON:0001242,5.86e-12,13;UBERON:0001262,5.86e-12,13;UBERON:0004786,5.86e-12,13;UBERON:0002465,9.04e-10,3;UBERON:0000331,1.79e-09,3;UBERON:0002116,1.79e-09,3;UBERON:0001204,1.79e-09,3;UBERON:0001168,1.79e-09,3;UBERON:0003199,7.32e-08,1;UBERON:0002108,2.57e-07,4 | |||
|phase1_expression=0,0.348975407639361,2.27499619694768,0.30246421130683,1.50268718983904,0.16787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,4.35877634027623,2.29692785646008,1.29228598847722,3.01659725760245,3.80046838912748,2.77233142735924,0.665191531965914,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81438353314578,5.32055717497707,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,2.27499619694768,0.30246421130683,1.50268718983904,0.16787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,4.35877634027623,2.29692785646008,1.29228598847722,3.01659725760245,3.80046838912748,2.77233142735924,0.665191531965914,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81438353314578,5.32055717497707,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:81584437..81584438,+ | |||
}} | }} |
Latest revision as of 04:38, 6 August 2015
Short description: | p@chr18:81584437..81584438, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:81584437..81584438, + |
Coexpression cluster: | MCL_coexpression_mm9:1051 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.57e-20 | 3 |
epithelial cell of tracheobronchial tree | 2.57e-20 | 3 |
branched duct epithelial cell | 2.57e-20 | 3 |
epithelial cell of lower respiratory tract | 2.57e-20 | 3 |
respiratory epithelial cell | 2.57e-20 | 3 |
tracheal epithelial cell | 2.57e-20 | 3 |
tracheoblast | 2.57e-20 | 3 |
epithelial cell | 1.79e-19 | 25 |
M cell of gut | 3.07e-19 | 3 |
endo-epithelial cell | 6.24e-15 | 15 |
endodermal cell | 3.97e-11 | 20 |
brush border epithelial cell | 8.96e-10 | 6 |
gut absorptive cell | 8.96e-10 | 6 |
enterocyte | 8.96e-10 | 6 |
defensive cell | 1.38e-08 | 7 |
columnar/cuboidal epithelial cell | 1.87e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.57e-20 | 3 |
respiratory airway | 2.57e-20 | 3 |
tracheobronchial tree | 2.57e-20 | 3 |
lower respiratory tract | 2.57e-20 | 3 |
mucosa | 3.79e-20 | 15 |
gut-associated lymphoid tissue | 3.36e-14 | 2 |
mucosa-associated lymphoid tissue | 3.36e-14 | 2 |
lymphoid tissue | 3.36e-14 | 2 |
organ component layer | 2.08e-12 | 24 |
intestinal mucosa | 5.86e-12 | 13 |
wall of intestine | 5.86e-12 | 13 |
gastrointestinal system mucosa | 5.86e-12 | 13 |
lymphoid system | 9.04e-10 | 3 |
ileal mucosa | 1.79e-09 | 3 |
ileum | 1.79e-09 | 3 |
mucosa of small intestine | 1.79e-09 | 3 |
wall of small intestine | 1.79e-09 | 3 |
egg chamber | 7.32e-08 | 1 |
small intestine | 2.57e-07 | 4 |