FFCP PHASE1:Mm9::chr19:4097392..4097415,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:4097392..4097415,+
|short_description=p2@Cdk2ap2
|description=CAGE_peak_2_at_Cdk2ap2_5end
|association_with_transcript=0bp_to_ENSMUST00000172914,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52004 | |EntrezGene=52004 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=380 | |||
|TSSclassifier=NA | |||
|UniProt=G3UX88,G3UYI1 | |UniProt=G3UX88,G3UYI1 | ||
|association_with_transcript=0bp_to_ENSMUST00000172914,ENSMUST00000174149,ENSMUST00000174514,ENSMUST00000174799_5end | |||
|cluster_id=chr19:4097392..4097415,+ | |||
|description=CAGE_peak_2_at_Cdk2ap2_5end | |||
|id=chr19:4097392..4097415,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.60e-07!66;CL:0002371!2.92e-07!118 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.12e-13!59;UBERON:0000160!9.87e-12!43;UBERON:0002100!2.88e-09!98;UBERON:0004923!3.32e-09!24;UBERON:0004119!4.49e-08!130;UBERON:0000925!4.49e-08!130;UBERON:0006595!4.49e-08!130;UBERON:0000344!7.44e-08!15;UBERON:0005256!8.97e-08!47;UBERON:0001007!1.16e-07!128;UBERON:0001555!1.16e-07!128;UBERON:0007026!1.16e-07!128;UBERON:0002108!1.75e-07!16;UBERON:0002204!2.34e-07!32;UBERON:0004921!5.70e-07!126;UBERON:0004185!5.70e-07!126;UBERON:0001242!8.84e-07!13;UBERON:0000060!8.84e-07!13;UBERON:0001262!8.84e-07!13;UBERON:0004786!8.84e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.64e-11,90;UBERON:0004923,3.32e-09,24;UBERON:0005409,4.12e-09,47;UBERON:0000344,7.43e-08,15;UBERON:0005256,7.85e-08,45;UBERON:0005177,1.16e-07,79;UBERON:0000160,1.67e-07,31;UBERON:0002204,2.34e-07,32;UBERON:0001242,8.83e-07,13;UBERON:0001262,8.83e-07,13;UBERON:0004786,8.83e-07,13 | |||
|phase1_expression=4.32401887182944,13.9590163055744,16.8349718574128,13.0059610861937,10.5188103288733,13.2624624810393,16.1192722010913,6.97265946584512,0,0.936258105287974,1.02730780935303,1.83475965689274,3.42401459862411,2.01066925563694,12.9912807108108,10.1237633694913,11.1929900500503,5.99378114180652,5.62169177783529,7.21462408056651,3.57181818634493,6.65249373045932,7.83599367416806,16.7992043933077,14.4527847072317,18.3754228516806,12.9228598847722,19.1769397090441,20.7125527207448,17.8941392129551,23.0599731081517,6.35030673459631,6.76571266343027,0,6.93243887403059,8.14549762256613,6.12508068787107,34.7381253511633,39.8481025707138,25.1291397107423,37.6468152339849,29.3709558532132,25.7320487106511,11.330713617802,12.2666086775613,7.15832333430558,18.7773922643529,11.3373081317832,10.7646229539891,10.4992145500113,10.7789544651529,7.18762821824858,3.6912173332702,5.07753499407941,4.7053131879945,8.48956138918625,6.30373567865265,10.3134418455488,4.04632921719196,5.28990979272033,6.97214543856797,11.5207140903505,11.5608323494448,22.497492932035,29.6659908770092,26.2877642530057,18.8748069626595,20.7477884873639,3.31806759387129,2.97013064329719,4.83747411108179,3.42781181284564,4.19650227808066,2.32732518508413,2.49198224647415,0,3.30347642998166,3.06449611404451,2.76491759861238,5.14356522147756,4.48289453651807,2.6045668527838,3.07101298901519,5.6276261003168,5.19514042441154,2.35702868378934,3.13217697758026,3.35519002485541,1.96888102666279,3.70300644523249,2.6087803983151,12.0459342777394,6.11974200336975,27.5248627735287,13.6453047664011,10.7526452903361,6.17955448579708,6.98764322570037,8.05336614268893,11.6602059588412,6.05626705039726,2.56652954828636,0,0,13.6389355837065,6.84071636782766,11.1215377903252,10.1623652949963,4.14300613835475,3.71105347662062,3.99016251562112,3.65358573974569,5.76538743140146,5.87818298155228,3.05730638552832,4.64966387919799,8.40462890296871,3.32578520915797,1.76922110389975,3.07357014900077,4.19598885074748,3.87900202508178,5.59175283654366,2.04946557908083,6.0739544975902,13.2837668708468,3.35482348616577,5.99902730993408,4.57452817463033,2.39665023047716,0.457500602818626,1.25654352112864,0.869121600961382,3.06858548796397,1.87009240103604,1.78465389374533,2.24046600470696,6.34475550111474,9.85618757891331,4.41927897361595,3.513251959993,3.90833577536904,3.06105620669094,2.41127708537144,1.76894897793452,2.43416068541215,2.71735001223214,3.3631438196072,1.72454394346274,1.32374256117473,1.58356011747554,2.6303487891309,1.11218899690239,3.83077383174383,3.08673204611915,2.7864797354589,5.61770549850588,9.77922047035918,7.95657798307659,3.93538967817454,3.75241695969754,4.14142741360334,2.3674473558521,4.9191057936851,4.47374627373397,3.72054311600653,2.68273401399619,2.91913355917924,3.62031669809657,2.46251196118643,3.72916523910936,5.55559952216263,5.26920276698522,6.30770168173747,1.47202963994889,1.85228302282712,11.2342386214491,8.46241813323342,4.26576501070468,2.09013004674395,4.38149368495117,4.43703754171354,6.67134131534611,10.0819581839656,7.11793592316767,6.42325923423642,6.53471542880701,5.96869416123452,5.8489226135736,5.39291645192533,11.2391785934841,12.1476176685164,7.2073802362171,4.34144347916969,6.76246414038483,4.88763186828754,5.81857461502877,2.94570443539338,3.73095569033118,4.42830443938806,4.39596437955849,4.68909222902842,8.59712618552732,4.50481785433454,7.27268281918851,9.89393294493356,7.1001042485976,11.3353265083636,9.16653066413111,6.61701116136864,4.21551589615092,13.1789478330279,4.31304619582064,8.55924179637558,8.42501717409313,10.3557339958316,9.32866550313943,16.8855232477179,4.98833613449833,4.16881105895066,3.09633455239849,2.71592137240301,4.92849521405854,3.85264392116176,4.52282917683426,4.09780660501378,3.15270288212382,3.76489972402917,3.02964060449226,5.73521601505083,6.38934432903814,6.36455857758651,13.5712155545345,7.61467957346193,10.3270497333998,5.24279817978992,3.69266356971921,1.75817529888305,5.73772308818364,3.7870639080656,3.78609863299508,7.02789739733949,7.32439552291516,4.77937595905104,4.23317480756549,5.66153061577665,5.66734982344852,3.79932615284705,4.34816555741176,1.60660658210904,3.69044221541498,3.5613120733451,0.81443479676788,3.62934270539578,11.9470624505967,5.82673526771955,6.65111825322452,15.0884063804718,11.8120757152309,11.6825356218692,5.42699415653264,12.3601468022352,10.3384239731569,17.6980584444057,18.9753495434998,14.4389760547462,4.08527526904546,3.96134406868882,4.91562998374467,3.21505552547388,2.48276327099183,3.0322698992352,2.30368628842969,5.78483403317739,7.04015124191131,8.26145076368899,16.7601582521771,3.62749756471256,1.13025098687134,2.41251699712623,3.70054266409723,4.10352249362653,7.28702091574627,2.03967832211561,10.0813819670733,5.36605856704379,7.40778109478847,9.98352822124862,5.60446333656203,7.77845788902177,1.35982743995084,2.37917468950219,1.24379976423981,15.2747298882418,2.84702394223022,3.65975040828328,5.94029374519907,6.27264888043406,5.459064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| |phase1_expression=4.32401887182944,13.9590163055744,16.8349718574128,13.0059610861937,10.5188103288733,13.2624624810393,16.1192722010913,6.97265946584512,0,0.936258105287974,1.02730780935303,1.83475965689274,3.42401459862411,2.01066925563694,12.9912807108108,10.1237633694913,11.1929900500503,5.99378114180652,5.62169177783529,7.21462408056651,3.57181818634493,6.65249373045932,7.83599367416806,16.7992043933077,14.4527847072317,18.3754228516806,12.9228598847722,19.1769397090441,20.7125527207448,17.8941392129551,23.0599731081517,6.35030673459631,6.76571266343027,0,6.93243887403059,8.14549762256613,6.12508068787107,34.7381253511633,39.8481025707138,25.1291397107423,37.6468152339849,29.3709558532132,25.7320487106511,11.330713617802,12.2666086775613,7.15832333430558,18.7773922643529,11.3373081317832,10.7646229539891,10.4992145500113,10.7789544651529,7.18762821824858,3.6912173332702,5.07753499407941,4.7053131879945,8.48956138918625,6.30373567865265,10.3134418455488,4.04632921719196,5.28990979272033,6.97214543856797,11.5207140903505,11.5608323494448,22.497492932035,29.6659908770092,26.2877642530057,18.8748069626595,20.7477884873639,3.31806759387129,2.97013064329719,4.83747411108179,3.42781181284564,4.19650227808066,2.32732518508413,2.49198224647415,0,3.30347642998166,3.06449611404451,2.76491759861238,5.14356522147756,4.48289453651807,2.6045668527838,3.07101298901519,5.6276261003168,5.19514042441154,2.35702868378934,3.13217697758026,3.35519002485541,1.96888102666279,3.70300644523249,2.6087803983151,12.0459342777394,6.11974200336975,27.5248627735287,13.6453047664011,10.7526452903361,6.17955448579708,6.98764322570037,8.05336614268893,11.6602059588412,6.05626705039726,2.56652954828636,0,0,13.6389355837065,6.84071636782766,11.1215377903252,10.1623652949963,4.14300613835475,3.71105347662062,3.99016251562112,3.65358573974569,5.76538743140146,5.87818298155228,3.05730638552832,4.64966387919799,8.40462890296871,3.32578520915797,1.76922110389975,3.07357014900077,4.19598885074748,3.87900202508178,5.59175283654366,2.04946557908083,6.0739544975902,13.2837668708468,3.35482348616577,5.99902730993408,4.57452817463033,2.39665023047716,0.457500602818626,1.25654352112864,0.869121600961382,3.06858548796397,1.87009240103604,1.78465389374533,2.24046600470696,6.34475550111474,9.85618757891331,4.41927897361595,3.513251959993,3.90833577536904,3.06105620669094,2.41127708537144,1.76894897793452,2.43416068541215,2.71735001223214,3.3631438196072,1.72454394346274,1.32374256117473,1.58356011747554,2.6303487891309,1.11218899690239,3.83077383174383,3.08673204611915,2.7864797354589,5.61770549850588,9.77922047035918,7.95657798307659,3.93538967817454,3.75241695969754,4.14142741360334,2.3674473558521,4.9191057936851,4.47374627373397,3.72054311600653,2.68273401399619,2.91913355917924,3.62031669809657,2.46251196118643,3.72916523910936,5.55559952216263,5.26920276698522,6.30770168173747,1.47202963994889,1.85228302282712,11.2342386214491,8.46241813323342,4.26576501070468,2.09013004674395,4.38149368495117,4.43703754171354,6.67134131534611,10.0819581839656,7.11793592316767,6.42325923423642,6.53471542880701,5.96869416123452,5.8489226135736,5.39291645192533,11.2391785934841,12.1476176685164,7.2073802362171,4.34144347916969,6.76246414038483,4.88763186828754,5.81857461502877,2.94570443539338,3.73095569033118,4.42830443938806,4.39596437955849,4.68909222902842,8.59712618552732,4.50481785433454,7.27268281918851,9.89393294493356,7.1001042485976,11.3353265083636,9.16653066413111,6.61701116136864,4.21551589615092,13.1789478330279,4.31304619582064,8.55924179637558,8.42501717409313,10.3557339958316,9.32866550313943,16.8855232477179,4.98833613449833,4.16881105895066,3.09633455239849,2.71592137240301,4.92849521405854,3.85264392116176,4.52282917683426,4.09780660501378,3.15270288212382,3.76489972402917,3.02964060449226,5.73521601505083,6.38934432903814,6.36455857758651,13.5712155545345,7.61467957346193,10.3270497333998,5.24279817978992,3.69266356971921,1.75817529888305,5.73772308818364,3.7870639080656,3.78609863299508,7.02789739733949,7.32439552291516,4.77937595905104,4.23317480756549,5.66153061577665,5.66734982344852,3.79932615284705,4.34816555741176,1.60660658210904,3.69044221541498,3.5613120733451,0.81443479676788,3.62934270539578,11.9470624505967,5.82673526771955,6.65111825322452,15.0884063804718,11.8120757152309,11.6825356218692,5.42699415653264,12.3601468022352,10.3384239731569,17.6980584444057,18.9753495434998,14.4389760547462,4.08527526904546,3.96134406868882,4.91562998374467,3.21505552547388,2.48276327099183,3.0322698992352,2.30368628842969,5.78483403317739,7.04015124191131,8.26145076368899,16.7601582521771,3.62749756471256,1.13025098687134,2.41251699712623,3.70054266409723,4.10352249362653,7.28702091574627,2.03967832211561,10.0813819670733,5.36605856704379,7.40778109478847,9.98352822124862,5.60446333656203,7.77845788902177,1.35982743995084,2.37917468950219,1.24379976423981,15.2747298882418,2.84702394223022,3.65975040828328,5.94029374519907,6.27264888043406,5.459064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| ||
|short_description=p2@Cdk2ap2 | |||
}} | }} |
Latest revision as of 18:12, 25 September 2015
Short description: | p2@Cdk2ap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk2ap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:380 |
Association with transcript: | 0bp_to_ENSMUST00000172914, ENSMUST00000174149, ENSMUST00000174514, ENSMUST00000174799_5end |
EntrezGene: | Cdk2ap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 3.64e-11 | 90 |
organ component layer | 3.32e-09 | 24 |
gastrointestinal system | 4.12e-09 | 47 |
mucosa | 7.43e-08 | 15 |
trunk mesenchyme | 7.85e-08 | 45 |
trunk region element | 1.16e-07 | 79 |
intestine | 1.67e-07 | 31 |
musculoskeletal system | 2.34e-07 | 32 |
intestinal mucosa | 8.83e-07 | 13 |
wall of intestine | 8.83e-07 | 13 |
gastrointestinal system mucosa | 8.83e-07 | 13 |