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FFCP PHASE1:Mm9::chr19:7369884..7369958,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:7369884..7369958,-
|DHSsupport=NA
|short_description=p2@Mark2
|DPIdataset=NA
|description=CAGE_peak_2_at_Mark2_5end
|association_with_transcript=0bp_to_ENSMUST00000025921,NM_001080390,uc008gkq.1_5end
|EntrezGene=13728
|EntrezGene=13728
|HGNC=
|HGNC=
|MCL_coexpression_id=895
|TSSclassifier=NA
|UniProt=Q3T9A3,Q05512
|UniProt=Q3T9A3,Q05512
|association_with_transcript=0bp_to_ENSMUST00000025921,NM_001080390,uc008gkq.1_5end
|cluster_id=chr19:7369884..7369958,-
|description=CAGE_peak_2_at_Mark2_5end
|id=chr19:7369884..7369958,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.05e-22!130;UBERON:0000925!1.05e-22!130;UBERON:0006595!1.05e-22!130;UBERON:0001007!9.35e-22!128;UBERON:0001555!9.35e-22!128;UBERON:0007026!9.35e-22!128;UBERON:0004921!1.34e-20!126;UBERON:0004185!1.34e-20!126;UBERON:0005409!3.31e-11!59;UBERON:0000077!2.13e-10!97;UBERON:0004923!8.27e-10!24;UBERON:0001041!3.57e-09!92;UBERON:0005911!9.05e-09!69;UBERON:0001004!2.29e-08!42;UBERON:0003104!3.58e-08!131;UBERON:0009142!3.58e-08!131;UBERON:0004177!5.30e-08!29;UBERON:0000065!5.31e-08!41;UBERON:0002193!8.56e-08!48;UBERON:0003929!1.19e-07!55;UBERON:0000160!1.27e-07!43;UBERON:0000072!2.27e-07!27;UBERON:0002405!4.80e-07!70;UBERON:0000344!6.32e-07!15;UBERON:0003408!8.65e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.08e-26,118;UBERON:0000925,8.08e-26,118;UBERON:0006595,8.08e-26,118;UBERON:0001007,9.01e-25,116;UBERON:0001555,9.01e-25,116;UBERON:0007026,9.01e-25,116;UBERON:0004921,1.74e-23,114;UBERON:0005409,3.07e-15,47;UBERON:0000160,2.04e-11,31;UBERON:0001041,6.00e-11,80;UBERON:0004923,1.52e-10,24;UBERON:0000077,2.97e-10,35;UBERON:0001004,1.60e-09,42;UBERON:0004177,3.29e-09,29;UBERON:0005057,3.29e-09,29;UBERON:0000065,4.08e-09,41;UBERON:0002193,4.85e-09,48;UBERON:0002405,4.85e-09,48;UBERON:0005911,8.85e-09,69;UBERON:0000072,1.63e-08,27;UBERON:0003408,6.94e-08,24;UBERON:0006562,1.23e-07,24;UBERON:0001557,1.23e-07,24;UBERON:0001042,1.23e-07,24;UBERON:0008814,1.23e-07,24;UBERON:0009145,1.23e-07,24;UBERON:0002390,1.31e-07,45;UBERON:0003061,1.31e-07,45;UBERON:0003929,1.48e-07,55;UBERON:0002370,1.81e-07,23;UBERON:0000974,1.81e-07,23;UBERON:0004807,1.81e-07,23;UBERON:0005058,1.81e-07,23;UBERON:0003351,1.81e-07,23;UBERON:0009113,1.81e-07,23;UBERON:0003295,1.81e-07,23;UBERON:0009722,1.81e-07,23;UBERON:0005562,1.81e-07,23;UBERON:0007690,1.81e-07,23;UBERON:0000344,2.09e-07,15
|phase1_expression=0,16.40184415905,20.4749657725291,12.40103266358,14.0250804384977,11.7515490338323,9.34450562382103,45.1931632045517,7.74337971834167,7.49006484230379,2.39705155515707,1.83475965689274,49.4770109501185,59.1836124376612,7.32841475994458,8.09901069559304,3.49780939064073,23.9751245672261,23.0352248457641,19.0975343309114,4.67738095830884,11.1205865344992,5.22399578277871,21.5989770771099,19.4997888907094,16.0784949952206,17.230479846363,17.2376986148711,11.7814520062952,11.3413558391969,11.5299865540758,8.25539875497521,7.38077745101484,0,7.22129049378186,5.48574329683025,6.73758875665818,63.61680787201,28.9094077473806,50.7818031654584,44.1173616023261,49.8623204019665,40.2973593015858,0.125896817975577,0.101376931219515,1.28482726513177,0,0,0,0,2.93971485413261,0,10.4025215755797,35.5427449585559,45.7087566833751,0,0.573066879877513,2.06268836910977,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.896053774194671,4.49422144421606,0.511290967734173,0.259786004602869,1.41335829804136,0,0,0,0,8.22665955842614,7.34743609877786,10.1104889002957,6.96521666286266,26.4116641320115,1.63286352971307,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.823120949949934,0.628332956648377,39.3039998697654,1.44599356919912,7.96149496754887,1.45590164952668,4.85851340612866,2.42437626567611,27.9587641827183,0,0,22.2247638031475,0.958520996047362,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.611036183101898,4.47865094196335,2.0217820674694,3.78795340595653,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,1.55222022443409,0,0,0.351902248327898,0.43839146485515,1.11218899690239,1.39300866608867,0.61734640922383,0.199034266818493,1.40442637462647,1.54408744268829,3.12579849335152,0,0.469052119962192,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.268412837520744,0,0,20.4859645449955,19.5693419331023,0.213288250535234,0.464473343720877,4.76809606891745,7.86565746031036,8.00560957841533,11.7939888189787,10.9141684155238,11.5289268306808,10.8074139784116,15.7175612912509,11.1129529657898,23.3693046250098,18.1555961894743,13.7407478545513,0.379335801906163,0.685491075658373,2.25415471346161,0,0.969762435838129,0.911765658574141,2.21327879934901,3.69025369949005,4.23896565171712,3.94870924549762,0.592905254174298,2.16898637430922,2.94838492669805,5.39669069723649,6.28866376304359,4.3411888755435,4.83789118384698,6.32931502391783,5.18832725680113,2.47105271869273,8.62609239164127,4.83783231969054,0.624075346229121,1.76805214562978,2.33216637578486,0.964887042726734,18.4753190166605,0,0.162964976442026,0.339490171550376,1.40814148973101,5.52770649557992,8.09348379012447,7.02481132288076,7.25121662888479,5.09368786192182,5.89982644032702,7.70157579163969,8.46156411142888,12.150520920847,0,2.71952841909355,3.93411418415229,1.10374698521893,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0,7.2389443456217,1.6025904330053,1.46598263418218,7.58862565673663,1.32745138339963,0,0,0.565815239267694,0.295301892880773,2.15204603560749,3.10113951801865,2.18120237686503,0.712994756769443,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,0,0,0,0,0,0.164549020602121,0.304464949114599,10.0908834467395,13.7690846061483,3.96951116498931,4.61681508236144,1.45317984026315,2.0506394475573,3.22305328808468,4.43180429311665,15.7399651780119,0.18542530201051,11.9609616558497,3.09580301944834,8.51894825900674,10.360265135258,11.7557035840082,7.32090154260872,0.509935289981566,1.6794174278839,1.10559979043539,14.3200592702267,0.158167996790568,1.82987520414164,4.75223499615926,8.99079672862215,9.38959024108564,10.1148259788616,10.9102561557443,8.11443420150492,15.9426417148905,11.8054469486516,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,0.651021924219751,0.209718688851422,0.483168241652012,0.288030006257865,28.441000856536,5.6763060281246,5.34096977257102,9.22437843142345,15.0382424360684,20.6628608972515,20.4332264183947,22.5964976577103,26.2512769865184,23.31928283643,28.2313318383153,31.9661848826388,26.8431038176519,32.1411480999315,5.8949899739955,6.65957860122194,6.9976808155391,2.85403847818933,4.63655025677257,4.87974436173073,6.77661009788881,9.4322086794789,13.5424468089548,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0.486213434136588,1.67690530102386,1.47074806760011,2.00022055021454,0.824140228955577,3.20919209591815,1.76888048234658,1.01391719956096,1.13175804831646,1.31098110457835,1.53660365771686,1.608193130757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|phase1_expression=0,16.40184415905,20.4749657725291,12.40103266358,14.0250804384977,11.7515490338323,9.34450562382103,45.1931632045517,7.74337971834167,7.49006484230379,2.39705155515707,1.83475965689274,49.4770109501185,59.1836124376612,7.32841475994458,8.09901069559304,3.49780939064073,23.9751245672261,23.0352248457641,19.0975343309114,4.67738095830884,11.1205865344992,5.22399578277871,21.5989770771099,19.4997888907094,16.0784949952206,17.230479846363,17.2376986148711,11.7814520062952,11.3413558391969,11.5299865540758,8.25539875497521,7.38077745101484,0,7.22129049378186,5.48574329683025,6.73758875665818,63.61680787201,28.9094077473806,50.7818031654584,44.1173616023261,49.8623204019665,40.2973593015858,0.125896817975577,0.101376931219515,1.28482726513177,0,0,0,0,2.93971485413261,0,10.4025215755797,35.5427449585559,45.7087566833751,0,0.573066879877513,2.06268836910977,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0,0,0.605809546665472,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0.896053774194671,4.49422144421606,0.511290967734173,0.259786004602869,1.41335829804136,0,0,0,0,8.22665955842614,7.34743609877786,10.1104889002957,6.96521666286266,26.4116641320115,1.63286352971307,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.823120949949934,0.628332956648377,39.3039998697654,1.44599356919912,7.96149496754887,1.45590164952668,4.85851340612866,2.42437626567611,27.9587641827183,0,0,22.2247638031475,0.958520996047362,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.611036183101898,4.47865094196335,2.0217820674694,3.78795340595653,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,1.55222022443409,0,0,0.351902248327898,0.43839146485515,1.11218899690239,1.39300866608867,0.61734640922383,0.199034266818493,1.40442637462647,1.54408744268829,3.12579849335152,0,0.469052119962192,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.56748166682099,0.292399974850665,0.439100230582101,0.268412837520744,0,0,20.4859645449955,19.5693419331023,0.213288250535234,0.464473343720877,4.76809606891745,7.86565746031036,8.00560957841533,11.7939888189787,10.9141684155238,11.5289268306808,10.8074139784116,15.7175612912509,11.1129529657898,23.3693046250098,18.1555961894743,13.7407478545513,0.379335801906163,0.685491075658373,2.25415471346161,0,0.969762435838129,0.911765658574141,2.21327879934901,3.69025369949005,4.23896565171712,3.94870924549762,0.592905254174298,2.16898637430922,2.94838492669805,5.39669069723649,6.28866376304359,4.3411888755435,4.83789118384698,6.32931502391783,5.18832725680113,2.47105271869273,8.62609239164127,4.83783231969054,0.624075346229121,1.76805214562978,2.33216637578486,0.964887042726734,18.4753190166605,0,0.162964976442026,0.339490171550376,1.40814148973101,5.52770649557992,8.09348379012447,7.02481132288076,7.25121662888479,5.09368786192182,5.89982644032702,7.70157579163969,8.46156411142888,12.150520920847,0,2.71952841909355,3.93411418415229,1.10374698521893,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0,7.2389443456217,1.6025904330053,1.46598263418218,7.58862565673663,1.32745138339963,0,0,0.565815239267694,0.295301892880773,2.15204603560749,3.10113951801865,2.18120237686503,0.712994756769443,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,0,0,0,0,0,0.164549020602121,0.304464949114599,10.0908834467395,13.7690846061483,3.96951116498931,4.61681508236144,1.45317984026315,2.0506394475573,3.22305328808468,4.43180429311665,15.7399651780119,0.18542530201051,11.9609616558497,3.09580301944834,8.51894825900674,10.360265135258,11.7557035840082,7.32090154260872,0.509935289981566,1.6794174278839,1.10559979043539,14.3200592702267,0.158167996790568,1.82987520414164,4.75223499615926,8.99079672862215,9.38959024108564,10.1148259788616,10.9102561557443,8.11443420150492,15.9426417148905,11.8054469486516,0,0.747582730219894,0.66183396182839,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,0.651021924219751,0.209718688851422,0.483168241652012,0.288030006257865,28.441000856536,5.6763060281246,5.34096977257102,9.22437843142345,15.0382424360684,20.6628608972515,20.4332264183947,22.5964976577103,26.2512769865184,23.31928283643,28.2313318383153,31.9661848826388,26.8431038176519,32.1411480999315,5.8949899739955,6.65957860122194,6.9976808155391,2.85403847818933,4.63655025677257,4.87974436173073,6.77661009788881,9.4322086794789,13.5424468089548,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0.486213434136588,1.67690530102386,1.47074806760011,2.00022055021454,0.824140228955577,3.20919209591815,1.76888048234658,1.01391719956096,1.13175804831646,1.31098110457835,1.53660365771686,1.608193130757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|short_description=p2@Mark2
}}
}}

Latest revision as of 03:59, 26 September 2015

Short description:p2@Mark2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mark2_5end
Coexpression cluster:MCL_coexpression_mm9:895
Association with transcript: 0bp_to_ENSMUST00000025921, NM_001080390, uc008gkq.1_5end
EntrezGene:Mark2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mark2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E945.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E449.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E859.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.50
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I217.24
Ileum epithelium, pool1.CNhs13199.10252-104B911.78
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G863.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H350.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G944.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I935.54
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A145.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A839.30
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H722.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A319.57
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F215.72
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E318.16
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B118.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H111.76
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B810.11
stomach, neonate N07.CNhs11210.718-18A910.91
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I115.94
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B528.44
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C59.22
thymus, embryo E17.CNhs10581.478-18C115.04
thymus, embryo E18.CNhs10595.1273-19G420.66
thymus, neonate N02.CNhs11181.1541-43F820.43
thymus, neonate N03.CNhs11137.2104-43C722.60
thymus, neonate N06.CNhs11197.681-26C426.25
thymus, neonate N07.CNhs11211.713-19D323.32
thymus, neonate N10.CNhs11194.748-24E428.23
thymus, neonate N20.CNhs11186.820-7A231.97
thymus, neonate N25.CNhs11125.1362-25G726.84
thymus, neonate N30.CNhs11132.1393-42G232.14
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E56.78
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure8.08e-26118
endoderm8.08e-26118
presumptive endoderm8.08e-26118
digestive system9.01e-25116
digestive tract9.01e-25116
primitive gut9.01e-25116
subdivision of digestive tract1.74e-23114
gastrointestinal system3.07e-1547
intestine2.04e-1131
foregut6.00e-1180
organ component layer1.52e-1024
mixed endoderm/mesoderm-derived structure2.97e-1035
respiratory system1.60e-0942
hemopoietic organ3.29e-0929
immune organ3.29e-0929
respiratory tract4.08e-0941
hemolymphoid system4.85e-0948
immune system4.85e-0948
endo-epithelium8.85e-0969
segment of respiratory tract1.63e-0827
gland of gut6.94e-0824
pharynx1.23e-0724
upper respiratory tract1.23e-0724
chordate pharynx1.23e-0724
pharyngeal arch system1.23e-0724
pharyngeal region of foregut1.23e-0724
hematopoietic system1.31e-0745
blood island1.31e-0745
gut epithelium1.48e-0755
thymus1.81e-0723
neck1.81e-0723
respiratory system epithelium1.81e-0723
hemolymphoid system gland1.81e-0723
pharyngeal epithelium1.81e-0723
thymic region1.81e-0723
pharyngeal gland1.81e-0723
entire pharyngeal arch endoderm1.81e-0723
thymus primordium1.81e-0723
early pharyngeal endoderm1.81e-0723
mucosa2.09e-0715
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