FFCP PHASE2:Hg19::chr20:3024266..3024272,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2797 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4420 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4420 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43555,Q9HBX7 | ||
|association_with_transcript=0bp_to_ENST00000245983,ENST00000359100,ENST00000359987,NM_001501,NM_178331,NM_178332,uc002whp.1,uc002whq.1,uc002whr.1,uc010gau.1_5end | |association_with_transcript=0bp_to_ENST00000245983,ENST00000359100,ENST00000359987,NM_001501,NM_178331,NM_178332,uc002whp.1,uc002whq.1,uc002whr.1,uc010gau.1_5end | ||
|cluster_id=chr20:3024266..3024272,+ | |cluster_id=chr20:3024266..3024272,+ |
Latest revision as of 00:44, 25 September 2015
Short description: | p1@GNRH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNRH2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000245983, ENST00000359100, ENST00000359987, NM_001501, NM_178331, NM_178332, uc002whp.1, uc002whq.1, uc002whr.1, uc010gau.1_5end |
EntrezGene: | GNRH2 |
HGNC: | 4420 |
UniProt: | O43555Q9HBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GNRH2 |
---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.09e-28 | 5 |
melanocyte | 1.07e-14 | 10 |
melanoblast | 1.07e-14 | 10 |
pigment cell | 1.13e-10 | 14 |
neurecto-epithelial cell | 1.24e-07 | 20 |
Showing 1 to 5 of 5 entries