FFCP PHASE1:Mm9::chr2:156546821..156546830,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:156546821..156546830,+
|short_description=p6@Dlgap4
|description=CAGE_peak_6_at_Dlgap4_5end
|association_with_transcript=100bp_to_ENSMUST00000109566,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228836 | |EntrezGene=228836 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PUF2,B1AZP2,Q3UCF7 | |UniProt=E9PUF2,B1AZP2,Q3UCF7 | ||
|association_with_transcript=100bp_to_ENSMUST00000109566,NM_001042488,uc008nnt.1,uc008nnu.1_5end | |||
|cluster_id=chr2:156546821..156546830,+ | |||
|description=CAGE_peak_6_at_Dlgap4_5end | |||
|id=chr2:156546821..156546830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.56e-10!102;UBERON:0000924!3.56e-10!102;UBERON:0006601!3.56e-10!102;UBERON:0003056!4.04e-09!49;UBERON:0000033!7.14e-09!63;UBERON:0000073!8.32e-09!75;UBERON:0001016!8.32e-09!75;UBERON:0003080!1.61e-08!40;UBERON:0001017!2.53e-08!73;UBERON:0005743!2.53e-08!73;UBERON:0002780!3.18e-08!39;UBERON:0001890!3.18e-08!39;UBERON:0006240!3.18e-08!39;UBERON:0000955!5.31e-08!50;UBERON:0006238!5.31e-08!50;UBERON:0002616!1.72e-07!49;UBERON:0002791!2.10e-07!29;UBERON:0003528!2.10e-07!29;UBERON:0001893!2.10e-07!29;UBERON:0000468!4.76e-07!333;UBERON:0002619!6.66e-07!17;UBERON:0000956!6.87e-07!21;UBERON:0001869!6.87e-07!21;UBERON:0000203!6.87e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.32e-10,95;UBERON:0000924,1.32e-10,95;UBERON:0006601,1.32e-10,95;UBERON:0003056,2.29e-09,49;UBERON:0003080,7.90e-09,40;UBERON:0001016,9.76e-09,75;UBERON:0002780,1.61e-08,39;UBERON:0001890,1.61e-08,39;UBERON:0006240,1.61e-08,39;UBERON:0001017,3.05e-08,73;UBERON:0000955,6.05e-08,47;UBERON:0006238,6.05e-08,47;UBERON:0003528,1.16e-07,29;UBERON:0002791,1.16e-07,29;UBERON:0001893,1.16e-07,29;UBERON:0002616,2.05e-07,46;UBERON:0002619,3.79e-07,17;UBERON:0000956,4.90e-07,21;UBERON:0001869,4.90e-07,21;UBERON:0000203,4.90e-07,21;UBERON:0010371,7.02e-07,73;UBERON:0002346,8.84e-07,64;UBERON:0003075,8.84e-07,64;UBERON:0007284,8.84e-07,64 | |||
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| |phase1_expression=0.960893082628764,0.348975407639361,1.36499771816861,0.90739263392049,1.50268718983904,0.671517087647559,0.467225281191051,0,0.84473233291,0.70219357896598,0.171217968225505,0.159544317990673,0,0.174840804837995,0,0,0,0,0.685572168028694,1.69755860719212,1.87095238332354,0.0992909512008853,0.783599367416806,0.639969691173627,0.91763712426868,0.57423196411502,0,0,0.570070258369122,0.252030129759931,1.10865255327652,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0.408338712524738,1.25559489221072,0,0,0,0.683045484958446,0.485510353031154,2.26614272356039,2.12891555560981,1.28482726513177,0.782391344348039,1.74420125104357,1.31811709640683,2.91644848611425,0.699932108126813,2.87505128729943,0.167782606057736,0,0.336093799142464,2.05807548828758,2.86533439938757,2.06268836910977,3.03474691289397,1.5869729378161,1.90149421051854,4.74382344896785,1.77858959222228,1.3498495759221,3.9554654502679,2.1314403448383,2.69640099466564,2.30530983192933,0.622137673850866,1.4850653216486,3.15487442027073,0,0.441737081903227,1.83736198822431,2.30029130443767,2.75765635983006,2.20231761998777,1.27687338085188,1.53606533256243,3.82470234417562,2.92760459527711,3.64639359389732,0.279182999001381,1.12552522006336,1.06958773443767,1.47314292736834,1.13897344639282,1.4911955666024,2.49896437999507,2.11600368298999,1.44932244350839,1.72084775396277,2.03991400112325,1.07940638327563,1.94932925234301,0.448026887097336,0.983110940922263,1.36344258062446,1.81850203222008,2.12003744706204,0.563373679106722,0,5.09610479413291,7.11066703153331,0.649473123033642,1.26679932737549,1.01104889002957,0.34255163915718,2.84831672011889,1.63286352971307,1.38788261412909,2.13125834818499,0.922461989024234,0.60289056221049,1.05829836422134,1.13099932196708,0.988779870937496,3.03658649531814,0.884610551949874,3.558870698843,1.98757366614354,0,1.86391761218122,0.878342391034642,1.25668024088073,0.255457055208591,0.11981512450592,0,0.127070227073065,2.39665023047716,3.66000482254901,2.01046963380583,3.12883776346098,3.06858548796397,2.90903262383384,2.27137768294861,1.2220723662038,1.11966273549084,0.505445516867349,0.631325567659422,2.47228841629137,2.5289231487682,1.80062129805349,1.05493372485001,3.19771546011241,3.33095672740609,2.06143794031403,1.03481348295606,1.29340795759705,2.64748512234947,1.58356011747554,0.876782929710299,1.66828349535359,4.87553033131033,3.2925141825271,1.39323986772945,0,0,0,1.44988040774851,2.57978665979206,1.2604344302271,1.42046841351126,0.196764231747404,1.54267112887378,1.86027155800326,1.60964040839772,1.40118410840603,0.658239399653922,1.64167464079095,1.94565142910054,1.46199987425332,1.09775057645525,0.805238512562231,2.73376933133365,2.05809224758569,0.991256348951394,0.528901133327089,1.06644125267617,1.62565670302307,1.28867461322093,1.4117846723634,0.889512175379481,1.90225626112559,0.474529061544512,1.31759163779209,1.50801125280162,0.795825888164603,2.14460495831032,0.898819408654221,1.08069024937347,1.59313018603494,0.569003702859245,1.25673363870702,3.38123207019241,2.03651327845314,0.969762435838129,1.26244475802573,1.64414996523069,2.06654207171443,1.72698600625512,0.863780147452604,0,0.83422552858047,0.393117990226406,0.674586337154561,0.202860121388503,0,0.25462585178142,0.863088412352432,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0,0.358794827043824,1.4473305640901,3.32555742299888,0.947457058852424,1.95557971730431,1.01847051465113,1.87752198630802,1.50755631697634,0.952174563544055,2.53673742215138,2.20689201748667,3.32197034473162,2.55127629851979,2.94953966488328,1.89953480052485,1.88043776155965,0,0.54390568381871,0.491764273019036,0.551873492609465,1.44495530989013,1.64096361229084,1.3114795630134,3.02965112645248,1.26203287766503,1.56175497718655,1.07711698866399,3.10659437338318,1.78238939265915,3.39691836946599,1.21443210502468,3.21481443702443,1.58115111178609,7.39039027770156,2.41298144854057,0.890328018336276,3.25773918707152,3.95928295134085,1.32745138339963,0.728341908464944,2.11626489875326,0.565815239267694,0.590603785761546,0.614870295887855,2.84271122485043,0.727067458955011,1.06949213515416,0.948110273807448,2.10837217149998,0,1.70219802876894,1.44048875225048,1.68166288917581,1.92903331528433,1.59606210278046,1.96205699362278,1.15184314421485,3.04464949114599,1.17335854031855,2.33015277950202,1.7642271844397,6.76033637060068,2.74489525383039,2.29189114726992,3.10368094408155,2.9545361954111,0.582961673259701,2.03967832211561,0.512612642393558,1.23832120777933,0.925972636848558,0.376736914009382,0.546776910884101,0,0,0.419854356970974,0.414599921413271,2.86401185404534,2.21435195506795,1.82987520414164,1.18805874903981,0.627264888043406,2.18362563746178,0.944050424693745,1.98368293740806,1.04702376793612,1.29614973291793,3.72803587852155,1.12738587736838,1.34564891439581,0.66183396182839,1.75006069509643,1.42075805825504,1.01373675294467,0.938857909166032,1.69265700297135,2.62148361064277,0.483168241652012,1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| ||
|short_description=p6@Dlgap4 | |||
}} | }} |
Latest revision as of 00:03, 26 September 2015
Short description: | p6@Dlgap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dlgap4_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENSMUST00000109566, NM_001042488, uc008nnt.1, uc008nnu.1_5end |
EntrezGene: | Dlgap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.32e-10 | 95 |
ectoderm | 1.32e-10 | 95 |
presumptive ectoderm | 1.32e-10 | 95 |
pre-chordal neural plate | 2.29e-09 | 49 |
anterior neural tube | 7.90e-09 | 40 |
nervous system | 9.76e-09 | 75 |
regional part of forebrain | 1.61e-08 | 39 |
forebrain | 1.61e-08 | 39 |
future forebrain | 1.61e-08 | 39 |
central nervous system | 3.05e-08 | 73 |
brain | 6.05e-08 | 47 |
future brain | 6.05e-08 | 47 |
brain grey matter | 1.16e-07 | 29 |
regional part of telencephalon | 1.16e-07 | 29 |
telencephalon | 1.16e-07 | 29 |
regional part of brain | 2.05e-07 | 46 |
regional part of cerebral cortex | 3.79e-07 | 17 |
cerebral cortex | 4.90e-07 | 21 |
cerebral hemisphere | 4.90e-07 | 21 |
pallium | 4.90e-07 | 21 |
ecto-epithelium | 7.02e-07 | 73 |
neurectoderm | 8.84e-07 | 64 |
neural plate | 8.84e-07 | 64 |
presumptive neural plate | 8.84e-07 | 64 |