FFCP PHASE1:Mm9::chr3:40549254..40549267,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:40549254..40549267,+
|short_description=p3@Hspa4l
|description=CAGE_peak_3_at_Hspa4l_5end
|association_with_transcript=-36bp_to_ENSMUST00000159819_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18415 | |EntrezGene=18415 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=E0CY23 | |UniProt=E0CY23 | ||
|association_with_transcript=-36bp_to_ENSMUST00000159819_5end | |||
|cluster_id=chr3:40549254..40549267,+ | |||
|description=CAGE_peak_3_at_Hspa4l_5end | |||
|id=chr3:40549254..40549267,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!3.19e-15!86;UBERON:0000033!2.73e-14!63;UBERON:0003056!2.08e-12!49;UBERON:0000955!4.85e-12!50;UBERON:0006238!4.85e-12!50;UBERON:0002616!8.33e-12!49;UBERON:0000153!3.43e-11!94;UBERON:0000483!9.70e-11!181;UBERON:0004121!9.78e-11!102;UBERON:0000924!9.78e-11!102;UBERON:0006601!9.78e-11!102;UBERON:0000073!1.50e-10!75;UBERON:0001016!1.50e-10!75;UBERON:0000119!2.60e-10!183;UBERON:0001017!2.95e-10!73;UBERON:0005743!2.95e-10!73;UBERON:0001049!3.31e-10!52;UBERON:0005068!3.31e-10!52;UBERON:0006241!3.31e-10!52;UBERON:0007135!3.31e-10!52;UBERON:0002346!5.31e-10!71;UBERON:0003075!5.31e-10!71;UBERON:0007284!5.31e-10!71;UBERON:0003080!2.45e-09!40;UBERON:0002780!7.39e-09!39;UBERON:0001890!7.39e-09!39;UBERON:0006240!7.39e-09!39;UBERON:0000025!3.63e-08!114;UBERON:0000477!2.65e-07!154;UBERON:0004111!4.36e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.35e-12,95;UBERON:0000924,1.35e-12,95;UBERON:0006601,1.35e-12,95;UBERON:0002346,1.57e-12,64;UBERON:0003075,1.57e-12,64;UBERON:0007284,1.57e-12,64;UBERON:0000483,1.91e-12,174;UBERON:0003056,2.28e-12,49;UBERON:0000119,4.58e-12,176;UBERON:0010371,8.23e-12,73;UBERON:0010314,3.38e-11,92;UBERON:0000073,3.79e-11,54;UBERON:0000955,1.11e-10,47;UBERON:0006238,1.11e-10,47;UBERON:0001016,1.19e-10,75;UBERON:0002616,1.89e-10,46;UBERON:0001017,2.36e-10,73;UBERON:0001049,2.71e-10,52;UBERON:0005068,2.71e-10,52;UBERON:0006241,2.71e-10,52;UBERON:0007135,2.71e-10,52;UBERON:0003080,2.82e-09,40;UBERON:0002780,8.53e-09,39;UBERON:0001890,8.53e-09,39;UBERON:0006240,8.53e-09,39;UBERON:0000025,3.35e-08,114;UBERON:0004111,3.42e-07,122 | |||
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| ||
|short_description=p3@Hspa4l | |||
}} | }} |
Latest revision as of 00:05, 2 October 2015
Short description: | p3@Hspa4l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hspa4l_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -36bp_to_ENSMUST00000159819_5end |
EntrezGene: | Hspa4l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.35e-12 | 95 |
ectoderm | 1.35e-12 | 95 |
presumptive ectoderm | 1.35e-12 | 95 |
neurectoderm | 1.57e-12 | 64 |
neural plate | 1.57e-12 | 64 |
presumptive neural plate | 1.57e-12 | 64 |
epithelium | 1.91e-12 | 174 |
pre-chordal neural plate | 2.28e-12 | 49 |
cell layer | 4.58e-12 | 176 |
ecto-epithelium | 8.23e-12 | 73 |
structure with developmental contribution from neural crest | 3.38e-11 | 92 |
regional part of nervous system | 3.79e-11 | 54 |
brain | 1.11e-10 | 47 |
future brain | 1.11e-10 | 47 |
nervous system | 1.19e-10 | 75 |
regional part of brain | 1.89e-10 | 46 |
central nervous system | 2.36e-10 | 73 |
neural tube | 2.71e-10 | 52 |
neural rod | 2.71e-10 | 52 |
future spinal cord | 2.71e-10 | 52 |
neural keel | 2.71e-10 | 52 |
anterior neural tube | 2.82e-09 | 40 |
regional part of forebrain | 8.53e-09 | 39 |
forebrain | 8.53e-09 | 39 |
future forebrain | 8.53e-09 | 39 |
tube | 3.35e-08 | 114 |
anatomical conduit | 3.42e-07 | 122 |