FFCP PHASE1:Mm9::chr3:87847053..87847072,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:87847053..87847072,+
|short_description=p2@Gpatch4
|description=CAGE_peak_2_at_Gpatch4_5end
|association_with_transcript=14bp_to_ENSMUST00000050223_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66614 | |EntrezGene=66614 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TFK5 | |UniProt=Q3TFK5 | ||
|association_with_transcript=14bp_to_ENSMUST00000050223_5end | |||
|cluster_id=chr3:87847053..87847072,+ | |||
|description=CAGE_peak_2_at_Gpatch4_5end | |||
|id=chr3:87847053..87847072,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.40e-08!13;CL:0000051!6.40e-08!13;CL:0000838!2.41e-07!12;CL:0000084!5.22e-07!11;CL:0000827!5.22e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.92e-08,13;CL:0000051,4.92e-08,13;CL:0000838,1.89e-07,12;CL:0000084,4.16e-07,11;CL:0000827,4.16e-07,11;CL:0000988,6.78e-07,32;CL:0002032,6.78e-07,32;CL:0000037,6.78e-07,32;CL:0000837,6.78e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.53e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.56e-08,29;UBERON:0005057,2.56e-08,29;UBERON:0000072,6.85e-07,27;UBERON:0002370,9.41e-07,23;UBERON:0000974,9.41e-07,23;UBERON:0004807,9.41e-07,23;UBERON:0005058,9.41e-07,23;UBERON:0003351,9.41e-07,23;UBERON:0009113,9.41e-07,23;UBERON:0003295,9.41e-07,23;UBERON:0009722,9.41e-07,23;UBERON:0005562,9.41e-07,23;UBERON:0007690,9.41e-07,23 | |||
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| ||
|short_description=p2@Gpatch4 | |||
}} | }} |
Latest revision as of 19:24, 25 September 2015
Short description: | p2@Gpatch4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpatch4_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 14bp_to_ENSMUST00000050223_5end |
EntrezGene: | Gpatch4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.92e-08 | 13 |
common lymphoid progenitor | 4.92e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.89e-07 | 12 |
T cell | 4.16e-07 | 11 |
pro-T cell | 4.16e-07 | 11 |
hematopoietic cell | 6.78e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.78e-07 | 32 |
hematopoietic stem cell | 6.78e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.56e-08 | 29 |
immune organ | 2.56e-08 | 29 |
segment of respiratory tract | 6.85e-07 | 27 |
thymus | 9.41e-07 | 23 |
neck | 9.41e-07 | 23 |
respiratory system epithelium | 9.41e-07 | 23 |
hemolymphoid system gland | 9.41e-07 | 23 |
pharyngeal epithelium | 9.41e-07 | 23 |
thymic region | 9.41e-07 | 23 |
pharyngeal gland | 9.41e-07 | 23 |
entire pharyngeal arch endoderm | 9.41e-07 | 23 |
thymus primordium | 9.41e-07 | 23 |
early pharyngeal endoderm | 9.41e-07 | 23 |