FFCP PHASE2:Hg19::chrX:48326632..48326645,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:92745 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18070 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18070 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JNK4 | ||
|association_with_transcript=52bp_to_ENST00000440085_5end | |association_with_transcript=52bp_to_ENST00000440085_5end | ||
|cluster_id=chrX:48326632..48326645,- | |cluster_id=chrX:48326632..48326645,- |
Latest revision as of 18:12, 15 September 2015
Short description: | p19@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SLC38A5_5end |
Coexpression cluster: | C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute |
Association with transcript: | 52bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p19@SLC38A5 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.15e-09 | 1 |
seminiferous tubule epithelial cell | 1.15e-09 | 1 |
Sertoli cell | 1.15e-09 | 1 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.15e-09 | 1 |
seminiferous tubule of testis | 1.15e-09 | 1 |
epithelium of male gonad | 1.15e-09 | 1 |
epithelial cord | 1.15e-09 | 1 |
sex cord | 1.15e-09 | 1 |
seminiferous tubule epithelium | 1.15e-09 | 1 |
testis sex cord | 1.15e-09 | 1 |
genital ridge | 1.15e-09 | 1 |
primitive sex cord of indifferent gonad | 1.15e-09 | 1 |
coelomic epithelium | 1.15e-09 | 1 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.67e-09 | 1 |
neuroectodermal tumor | 4.76e-08 | 10 |
Showing 1 to 2 of 2 entries