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FFCP PHASE2:Hg19::chrX:48326632..48326645,-: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:92745 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18070 |TSScla...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:92745
|EntrezGene=92745
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:18070
|HGNC=18070
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:C9JNK4
|UniProt=C9JNK4
|association_with_transcript=52bp_to_ENST00000440085_5end
|association_with_transcript=52bp_to_ENST00000440085_5end
|cluster_id=chrX:48326632..48326645,-
|cluster_id=chrX:48326632..48326645,-

Latest revision as of 18:12, 15 September 2015

Short description:p19@SLC38A5
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_19_at_SLC38A5_5end
Coexpression cluster:C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute
Association with transcript: 52bp_to_ENST00000440085_5end
EntrezGene:SLC38A5
HGNC: 18070
UniProt: C9JNK4
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data