FFCP PHASE1:Mm9::chr4:138010220..138010242,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:138010220..138010242,+
|short_description=p4@Camk2n1
|description=CAGE_peak_4_at_Camk2n1_5end
|association_with_transcript=0bp_to_ENSMUST00000050918_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66259 | |EntrezGene=66259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QWF9 | |UniProt=Q6QWF9 | ||
|association_with_transcript=0bp_to_ENSMUST00000050918_5end | |||
|cluster_id=chr4:138010220..138010242,+ | |||
|description=CAGE_peak_4_at_Camk2n1_5end | |||
|id=chr4:138010220..138010242,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.83e-13!73;UBERON:0005743!9.83e-13!73;UBERON:0000073!2.53e-12!75;UBERON:0001016!2.53e-12!75;UBERON:0004121!4.01e-12!102;UBERON:0000924!4.01e-12!102;UBERON:0006601!4.01e-12!102;UBERON:0007023!5.02e-11!51;UBERON:0002346!9.50e-11!71;UBERON:0003075!9.50e-11!71;UBERON:0007284!9.50e-11!71;UBERON:0000033!1.19e-10!63;UBERON:0000955!1.45e-10!50;UBERON:0006238!1.45e-10!50;UBERON:0002616!4.58e-10!49;UBERON:0004111!1.95e-09!122;UBERON:0000480!2.25e-09!308;UBERON:0000467!2.25e-09!308;UBERON:0001049!3.57e-09!52;UBERON:0005068!3.57e-09!52;UBERON:0006241!3.57e-09!52;UBERON:0007135!3.57e-09!52;UBERON:0000025!3.17e-08!114;UBERON:0000468!8.45e-08!333;UBERON:0000923!1.14e-07!314;UBERON:0005291!1.14e-07!314;UBERON:0006598!1.14e-07!314;UBERON:0002532!1.14e-07!314;UBERON:0000160!3.48e-07!43;UBERON:0003056!4.28e-07!49;UBERON:0003080!4.54e-07!40;UBERON:0002021!4.80e-07!10;UBERON:0000411!4.80e-07!10;UBERON:0001950!4.80e-07!10;UBERON:0000481!7.68e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.58e-13,73;UBERON:0001016,2.47e-12,75;UBERON:0011216,3.59e-12,194;UBERON:0004121,1.85e-11,95;UBERON:0000924,1.85e-11,95;UBERON:0006601,1.85e-11,95;UBERON:0007023,4.92e-11,51;UBERON:0002346,3.03e-10,64;UBERON:0003075,3.03e-10,64;UBERON:0007284,3.03e-10,64;UBERON:0000073,3.85e-10,54;UBERON:0004111,1.91e-09,122;UBERON:0001049,3.51e-09,52;UBERON:0005068,3.51e-09,52;UBERON:0006241,3.51e-09,52;UBERON:0007135,3.51e-09,52;UBERON:0000955,4.57e-09,47;UBERON:0006238,4.57e-09,47;UBERON:0002616,1.37e-08,46;UBERON:0010371,1.84e-08,73;UBERON:0000025,3.12e-08,114;UBERON:0000160,6.80e-08,31;UBERON:0003056,4.23e-07,49;UBERON:0003080,4.48e-07,40;UBERON:0002021,4.74e-07,10;UBERON:0000411,4.74e-07,10;UBERON:0001950,4.74e-07,10;UBERON:0010314,9.45e-07,92 | |||
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| ||
|short_description=p4@Camk2n1 | |||
}} | }} |
Latest revision as of 14:12, 26 September 2015
Short description: | p4@Camk2n1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000050918_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.58e-13 | 73 |
nervous system | 2.47e-12 | 75 |
organ system subdivision | 3.59e-12 | 194 |
ectoderm-derived structure | 1.85e-11 | 95 |
ectoderm | 1.85e-11 | 95 |
presumptive ectoderm | 1.85e-11 | 95 |
adult organism | 4.92e-11 | 51 |
neurectoderm | 3.03e-10 | 64 |
neural plate | 3.03e-10 | 64 |
presumptive neural plate | 3.03e-10 | 64 |
regional part of nervous system | 3.85e-10 | 54 |
anatomical conduit | 1.91e-09 | 122 |
neural tube | 3.51e-09 | 52 |
neural rod | 3.51e-09 | 52 |
future spinal cord | 3.51e-09 | 52 |
neural keel | 3.51e-09 | 52 |
brain | 4.57e-09 | 47 |
future brain | 4.57e-09 | 47 |
regional part of brain | 1.37e-08 | 46 |
ecto-epithelium | 1.84e-08 | 73 |
tube | 3.12e-08 | 114 |
intestine | 6.80e-08 | 31 |
pre-chordal neural plate | 4.23e-07 | 49 |
anterior neural tube | 4.48e-07 | 40 |
occipital lobe | 4.74e-07 | 10 |
visual cortex | 4.74e-07 | 10 |
neocortex | 4.74e-07 | 10 |
structure with developmental contribution from neural crest | 9.45e-07 | 92 |