FFCP PHASE1:Mm9::chr4:138010293..138010328,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:138010293..138010328,+
|short_description=p1@Camk2n1
|description=CAGE_peak_1_at_Camk2n1_5end
|association_with_transcript=64bp_to_ENSMUST00000050918_5end
...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66259 | |EntrezGene=66259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QWF9 | |UniProt=Q6QWF9 | ||
|association_with_transcript=64bp_to_ENSMUST00000050918_5end | |||
|cluster_id=chr4:138010293..138010328,+ | |||
|description=CAGE_peak_1_at_Camk2n1_5end | |||
|id=chr4:138010293..138010328,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.98e-08,33;CL:0000047,1.98e-08,33;CL:0000031,1.98e-08,33;CL:0000404,1.98e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.93e-19!73;UBERON:0005743!6.93e-19!73;UBERON:0004121!2.48e-18!102;UBERON:0000924!2.48e-18!102;UBERON:0006601!2.48e-18!102;UBERON:0000073!8.02e-18!75;UBERON:0001016!8.02e-18!75;UBERON:0002346!3.44e-15!71;UBERON:0003075!3.44e-15!71;UBERON:0007284!3.44e-15!71;UBERON:0000033!6.41e-15!63;UBERON:0001049!2.97e-13!52;UBERON:0005068!2.97e-13!52;UBERON:0006241!2.97e-13!52;UBERON:0007135!2.97e-13!52;UBERON:0004111!1.01e-12!122;UBERON:0000955!1.13e-12!50;UBERON:0006238!1.13e-12!50;UBERON:0002616!4.23e-12!49;UBERON:0000468!1.28e-11!333;UBERON:0000025!1.46e-11!114;UBERON:0003056!6.70e-11!49;UBERON:0003080!1.96e-09!40;UBERON:0000922!5.62e-09!328;UBERON:0002780!6.35e-09!39;UBERON:0001890!6.35e-09!39;UBERON:0006240!6.35e-09!39;UBERON:0002020!1.35e-08!34;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0005177!3.17e-07!85;UBERON:0000480!4.28e-07!308;UBERON:0000467!4.28e-07!308;UBERON:0000475!5.40e-07!200;UBERON:0000479!5.90e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-19,95;UBERON:0000924,4.01e-19,95;UBERON:0006601,4.01e-19,95;UBERON:0001017,6.63e-19,73;UBERON:0001016,7.69e-18,75;UBERON:0002346,2.51e-16,64;UBERON:0003075,2.51e-16,64;UBERON:0007284,2.51e-16,64;UBERON:0010371,5.94e-15,73;UBERON:0000073,2.30e-14,54;UBERON:0001049,2.88e-13,52;UBERON:0005068,2.88e-13,52;UBERON:0006241,2.88e-13,52;UBERON:0007135,2.88e-13,52;UBERON:0004111,1.14e-12,122;UBERON:0011216,6.52e-12,194;UBERON:0000025,1.64e-11,114;UBERON:0000955,4.38e-11,47;UBERON:0006238,4.38e-11,47;UBERON:0003056,6.54e-11,49;UBERON:0002616,1.55e-10,46;UBERON:0010314,1.63e-10,92;UBERON:0003080,1.92e-09,40;UBERON:0002780,6.23e-09,39;UBERON:0001890,6.23e-09,39;UBERON:0006240,6.23e-09,39;UBERON:0002020,1.33e-08,34;UBERON:0002021,3.81e-08,10;UBERON:0000411,3.81e-08,10;UBERON:0001950,3.81e-08,10;UBERON:0000922,2.22e-07,320;UBERON:0000479,6.35e-07,349 | |||
|phase1_expression=64.8602830774416,6.2815573375085,6.82498859084304,13.0059610861937,15.0268718983904,17.4594442788365,33.1729949645646,0.129123323441576,5.91312633037,1.63845168425395,0.513653904676515,0.159544317990673,0,0,2.99798785634096,4.45445588257617,0.699561878128147,0.630924330716475,0.411343300817216,0,76.2838312655096,0.0992909512008853,0,10.8794847499517,9.40578052375397,3.44539178469012,8.61523992318149,7.32602191132023,18.4322716872683,8.56902441183765,5.76499327703792,0,0,0,29.1740135948787,29.5897668738116,29.6045566580435,0,0,0,0,0,0,1.76255545165808,3.14268486780495,0.917733760808408,27.3836970521814,8.28495594245697,8.5677611266444,12.0546537426056,6.57936181639204,25.8754615856949,0.671130424230945,1.45072428402269,1.34437519656986,41.9332880738594,34.3840127926508,20.6268836910977,62.3134699447561,117.964988377663,81.1304196487909,5.76035704517525,5.33576877666684,2.6996991518442,0,2.8419204597844,14.6804054154018,28.8163728991166,13.7907184370275,17.010748229793,12.8298226424343,152.251974687227,213.800747641162,15.5563315002992,12.8432931164437,36.7687514644008,345.763866338081,378.592957422582,501.986150681404,60.2720334926986,63.8583752344819,55.2168172790166,183.144047344906,197.52967612112,268.160924848302,193.5709806562,212.276176071462,96.9277118291563,10.9045718399785,13.9807386197553,104.641080421306,61.9505191426598,64.5972767022363,150.037487275313,161.79432794447,251.791110548703,20.0835520788405,1.02258193546835,0.519572009205738,0.70667914902068,40.2812180561306,0,0,0,38.5354052999961,35.7237410319889,42.9695778262566,37.2239447884135,13.9826457169473,50.6187694211052,15.7871647357184,30.4465478312141,32.5167851131042,25.0199583317353,42.9198781045323,16.9649898295062,105.057861287109,102.087145985458,9.73071607144862,11.0001457964238,9.71702681225732,15.0311328471919,136.065985689229,228.95458326303,167.557365450764,76.6371165625774,1.91704199209472,0.599902730993408,0.762421362438388,454.165218675422,641.415845151714,35.8114903521664,1686.44355450547,1068.37918072612,597.598416153295,383.376104629111,42.4670147255819,23.1396965334773,17.6905930903572,107.114904646215,33.9614356132657,33.3358051428536,64.2821803405097,52.7466862425003,63.7501997047942,62.7757229395764,59.0320864726292,164.017937048536,4.095791865724,9.64441008855878,10.7330185740009,14.4669183402199,16.6828349535359,17.7608604926305,20.7839957772023,32.6416197582329,0,0,0,5.79952163099405,7.27030785941398,5.40186184383045,10.6535131013345,7.08351234290654,9.87309522479221,9.99895962426754,15.8281306825775,8.17357396570186,10.8609500942897,23.4759473633106,31.454698103792,26.9007976862611,34.469368100695,32.7463661775307,558.530103386322,34.1643313099224,127.211231448762,16.6603856998033,27.3008960685099,28.5651106388339,39.8200455485268,51.6309823035757,76.2756690387905,87.6940136378898,73.0774754778548,118.418548446564,124.662263564934,147.426745782493,117.36838044571,101.566593177927,79.7549404037622,88.0204427784303,53.6760159697221,35.6455359342354,81.1495696846179,63.9465169434287,75.641469995374,52.1109141785067,92.8944730355339,117.792898087723,132.663925025962,100.445291432346,270.957701157654,12.0128476115588,14.9384836286034,15.9652099793246,18.6631311677423,30.1471449690521,45.3234016170927,125.435515928553,134.896508676829,65.0710549255753,451.432168495893,107.548733876197,99.8520553966594,74.510768994398,67.9916197248047,154.381926836278,133.207050110122,9.09558776498327,14.1779529504563,15.6165478913173,20.8874320976767,26.2984824183651,65.9380885254258,61.6622327230644,63.526963074795,64.003295308496,58.9982644032702,85.045060337468,55.0865092152207,106.751005233156,0,0,16.7199852826472,17.6599517635029,366.055345172166,216.489985135799,0,19.9452032491455,135.66853434899,171.402608746224,249.675717972314,117.09471099675,101.150598033407,97.6614031221472,129.134613834291,139.990555939518,127.282664498781,686.34233187698,42.0142652216475,39.1744328067961,23.455722146915,58.0694832863325,108.85101343877,34.7176309701623,26.3021494559333,26.9705264050934,28.9395855023157,48.8821885230845,39.2811005615696,24.3567598749929,34.2237483249332,24.6508671189936,25.3004660579997,37.1287955693473,251.925308257803,18.546292685225,32.9864643646024,39.2236774107814,145.241651353022,98.1028496811388,84.9072946306944,124.221699238756,9.85621173867584,18.0057260234247,32.8587313101893,166.205342965012,22.9279485908186,14.6560407575419,21.7257666085708,19.2044852701722,104.350139513487,498.237786502239,12.3027034174454,18.57481811669,26.1124283591293,9.41842285023455,15.9932246433599,6.86334519619568,7.81900777971734,5.73800954526998,6.21899882119907,90.6937087114358,17.0821436533813,26.838169660744,27.1093405462721,31.9905092902137,36.2481855818655,32.5023074787418,47.0298163077161,25.9138382564189,89.4343315713371,75.182056883518,13.5286305284206,13.6060056900021,7.77654905148359,10.5003641705786,10.2036260547408,7.43406952159424,11.7357238645754,15.1037086418982,24.3273679067649,10.3881171955183,13.2493802878618,6.00421129193539,10.7444364103787,5.44368072973584,3.63778304337826,2.14832034800978,3.3775830312815,0.841368146639782,1.47689527174577,1.71642964911851,0.914481679859998,1.20991422164209,1.8516997340553,0.769694733122636,0.701261413089414,53.9618313004203,0.887943813496259,0.0897138566094757,0.671538465456314,82.1055774636809,28.1523713176773,39.9270540902638,28.2966260384367,51.6619267156424,970.24366561612,962.540069536507,1040.37825240594,1583.62707529708,1571.57930035385,2051.64982531043,1636.2545405619,2157.48888464724,2228.55436738432,1878.95217134735,19.9271707361619,25.936616771067,15.7074917293803,28.4434858969904,31.4419743941973,46.5124076378536,33.7815026258455,34.2018195016564,31.4500825399979,30.5763626234195,39.2892914829872,34.5186204736519,36.9883954506036,30.9881737639567,31.2448951118536,45.247900671892,25.4945517078682,20.255468148689,31.3185284610513,32.3837624295674,35.3155329956978,36.0275886503455,33.6195027825723,44.9120427393895,38.1142990682089,30.7997172725702,26.8904120122976,33.9359927754817,27.0250186553265,46.5748085475923,25.2692588604491,21.0799592283706,37.6492559716114,31.762052443123,32.4083106448318,35.9727232230642,37.6629889597108,48.3459871608671,43.2311630475586,28.676884485537,28.7516116169323 | |phase1_expression=64.8602830774416,6.2815573375085,6.82498859084304,13.0059610861937,15.0268718983904,17.4594442788365,33.1729949645646,0.129123323441576,5.91312633037,1.63845168425395,0.513653904676515,0.159544317990673,0,0,2.99798785634096,4.45445588257617,0.699561878128147,0.630924330716475,0.411343300817216,0,76.2838312655096,0.0992909512008853,0,10.8794847499517,9.40578052375397,3.44539178469012,8.61523992318149,7.32602191132023,18.4322716872683,8.56902441183765,5.76499327703792,0,0,0,29.1740135948787,29.5897668738116,29.6045566580435,0,0,0,0,0,0,1.76255545165808,3.14268486780495,0.917733760808408,27.3836970521814,8.28495594245697,8.5677611266444,12.0546537426056,6.57936181639204,25.8754615856949,0.671130424230945,1.45072428402269,1.34437519656986,41.9332880738594,34.3840127926508,20.6268836910977,62.3134699447561,117.964988377663,81.1304196487909,5.76035704517525,5.33576877666684,2.6996991518442,0,2.8419204597844,14.6804054154018,28.8163728991166,13.7907184370275,17.010748229793,12.8298226424343,152.251974687227,213.800747641162,15.5563315002992,12.8432931164437,36.7687514644008,345.763866338081,378.592957422582,501.986150681404,60.2720334926986,63.8583752344819,55.2168172790166,183.144047344906,197.52967612112,268.160924848302,193.5709806562,212.276176071462,96.9277118291563,10.9045718399785,13.9807386197553,104.641080421306,61.9505191426598,64.5972767022363,150.037487275313,161.79432794447,251.791110548703,20.0835520788405,1.02258193546835,0.519572009205738,0.70667914902068,40.2812180561306,0,0,0,38.5354052999961,35.7237410319889,42.9695778262566,37.2239447884135,13.9826457169473,50.6187694211052,15.7871647357184,30.4465478312141,32.5167851131042,25.0199583317353,42.9198781045323,16.9649898295062,105.057861287109,102.087145985458,9.73071607144862,11.0001457964238,9.71702681225732,15.0311328471919,136.065985689229,228.95458326303,167.557365450764,76.6371165625774,1.91704199209472,0.599902730993408,0.762421362438388,454.165218675422,641.415845151714,35.8114903521664,1686.44355450547,1068.37918072612,597.598416153295,383.376104629111,42.4670147255819,23.1396965334773,17.6905930903572,107.114904646215,33.9614356132657,33.3358051428536,64.2821803405097,52.7466862425003,63.7501997047942,62.7757229395764,59.0320864726292,164.017937048536,4.095791865724,9.64441008855878,10.7330185740009,14.4669183402199,16.6828349535359,17.7608604926305,20.7839957772023,32.6416197582329,0,0,0,5.79952163099405,7.27030785941398,5.40186184383045,10.6535131013345,7.08351234290654,9.87309522479221,9.99895962426754,15.8281306825775,8.17357396570186,10.8609500942897,23.4759473633106,31.454698103792,26.9007976862611,34.469368100695,32.7463661775307,558.530103386322,34.1643313099224,127.211231448762,16.6603856998033,27.3008960685099,28.5651106388339,39.8200455485268,51.6309823035757,76.2756690387905,87.6940136378898,73.0774754778548,118.418548446564,124.662263564934,147.426745782493,117.36838044571,101.566593177927,79.7549404037622,88.0204427784303,53.6760159697221,35.6455359342354,81.1495696846179,63.9465169434287,75.641469995374,52.1109141785067,92.8944730355339,117.792898087723,132.663925025962,100.445291432346,270.957701157654,12.0128476115588,14.9384836286034,15.9652099793246,18.6631311677423,30.1471449690521,45.3234016170927,125.435515928553,134.896508676829,65.0710549255753,451.432168495893,107.548733876197,99.8520553966594,74.510768994398,67.9916197248047,154.381926836278,133.207050110122,9.09558776498327,14.1779529504563,15.6165478913173,20.8874320976767,26.2984824183651,65.9380885254258,61.6622327230644,63.526963074795,64.003295308496,58.9982644032702,85.045060337468,55.0865092152207,106.751005233156,0,0,16.7199852826472,17.6599517635029,366.055345172166,216.489985135799,0,19.9452032491455,135.66853434899,171.402608746224,249.675717972314,117.09471099675,101.150598033407,97.6614031221472,129.134613834291,139.990555939518,127.282664498781,686.34233187698,42.0142652216475,39.1744328067961,23.455722146915,58.0694832863325,108.85101343877,34.7176309701623,26.3021494559333,26.9705264050934,28.9395855023157,48.8821885230845,39.2811005615696,24.3567598749929,34.2237483249332,24.6508671189936,25.3004660579997,37.1287955693473,251.925308257803,18.546292685225,32.9864643646024,39.2236774107814,145.241651353022,98.1028496811388,84.9072946306944,124.221699238756,9.85621173867584,18.0057260234247,32.8587313101893,166.205342965012,22.9279485908186,14.6560407575419,21.7257666085708,19.2044852701722,104.350139513487,498.237786502239,12.3027034174454,18.57481811669,26.1124283591293,9.41842285023455,15.9932246433599,6.86334519619568,7.81900777971734,5.73800954526998,6.21899882119907,90.6937087114358,17.0821436533813,26.838169660744,27.1093405462721,31.9905092902137,36.2481855818655,32.5023074787418,47.0298163077161,25.9138382564189,89.4343315713371,75.182056883518,13.5286305284206,13.6060056900021,7.77654905148359,10.5003641705786,10.2036260547408,7.43406952159424,11.7357238645754,15.1037086418982,24.3273679067649,10.3881171955183,13.2493802878618,6.00421129193539,10.7444364103787,5.44368072973584,3.63778304337826,2.14832034800978,3.3775830312815,0.841368146639782,1.47689527174577,1.71642964911851,0.914481679859998,1.20991422164209,1.8516997340553,0.769694733122636,0.701261413089414,53.9618313004203,0.887943813496259,0.0897138566094757,0.671538465456314,82.1055774636809,28.1523713176773,39.9270540902638,28.2966260384367,51.6619267156424,970.24366561612,962.540069536507,1040.37825240594,1583.62707529708,1571.57930035385,2051.64982531043,1636.2545405619,2157.48888464724,2228.55436738432,1878.95217134735,19.9271707361619,25.936616771067,15.7074917293803,28.4434858969904,31.4419743941973,46.5124076378536,33.7815026258455,34.2018195016564,31.4500825399979,30.5763626234195,39.2892914829872,34.5186204736519,36.9883954506036,30.9881737639567,31.2448951118536,45.247900671892,25.4945517078682,20.255468148689,31.3185284610513,32.3837624295674,35.3155329956978,36.0275886503455,33.6195027825723,44.9120427393895,38.1142990682089,30.7997172725702,26.8904120122976,33.9359927754817,27.0250186553265,46.5748085475923,25.2692588604491,21.0799592283706,37.6492559716114,31.762052443123,32.4083106448318,35.9727232230642,37.6629889597108,48.3459871608671,43.2311630475586,28.676884485537,28.7516116169323 | ||
|short_description=p1@Camk2n1 | |||
}} | }} |
Latest revision as of 14:12, 26 September 2015
Short description: | p1@Camk2n1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 64bp_to_ENSMUST00000050918_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.98e-08 | 33 |
neuronal stem cell | 1.98e-08 | 33 |
neuroblast | 1.98e-08 | 33 |
electrically signaling cell | 1.98e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.01e-19 | 95 |
ectoderm | 4.01e-19 | 95 |
presumptive ectoderm | 4.01e-19 | 95 |
central nervous system | 6.63e-19 | 73 |
nervous system | 7.69e-18 | 75 |
neurectoderm | 2.51e-16 | 64 |
neural plate | 2.51e-16 | 64 |
presumptive neural plate | 2.51e-16 | 64 |
ecto-epithelium | 5.94e-15 | 73 |
regional part of nervous system | 2.30e-14 | 54 |
neural tube | 2.88e-13 | 52 |
neural rod | 2.88e-13 | 52 |
future spinal cord | 2.88e-13 | 52 |
neural keel | 2.88e-13 | 52 |
anatomical conduit | 1.14e-12 | 122 |
organ system subdivision | 6.52e-12 | 194 |
tube | 1.64e-11 | 114 |
brain | 4.38e-11 | 47 |
future brain | 4.38e-11 | 47 |
pre-chordal neural plate | 6.54e-11 | 49 |
regional part of brain | 1.55e-10 | 46 |
structure with developmental contribution from neural crest | 1.63e-10 | 92 |
anterior neural tube | 1.92e-09 | 40 |
regional part of forebrain | 6.23e-09 | 39 |
forebrain | 6.23e-09 | 39 |
future forebrain | 6.23e-09 | 39 |
gray matter | 1.33e-08 | 34 |
occipital lobe | 3.81e-08 | 10 |
visual cortex | 3.81e-08 | 10 |
neocortex | 3.81e-08 | 10 |
embryo | 2.22e-07 | 320 |
tissue | 6.35e-07 | 349 |