Personal tools

FFCP PHASE1:Mm9::chr5:38611720..38611799,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:38611720..38611799,+ |short_description=p1@Lyar |description=CAGE_peak_1_at_Lyar_5end |association_with_transcript=0bp_to_ENSMUST00000123207,ENSMUST0000013...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:38611720..38611799,+
|DHSsupport=NA
|short_description=p1@Lyar
|DPIdataset=NA
|description=CAGE_peak_1_at_Lyar_5end
|association_with_transcript=0bp_to_ENSMUST00000123207,ENSMUST00000130721,ENSMUST00000132190,ENSMUST00000152066,ENSMUST00000154975,ENSMUST00000155300,NM_025281,uc008xgg.2,uc008xgh.2_5end
|EntrezGene=17089
|EntrezGene=17089
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=D3YU83,D3Z7N3,D3Z345,D3Z009,D6RDT2,D3Z5X8,Q08288
|UniProt=D3YU83,D3Z7N3,D3Z345,D3Z009,D6RDT2,D3Z5X8,Q08288
|association_with_transcript=0bp_to_ENSMUST00000123207,ENSMUST00000130721,ENSMUST00000132190,ENSMUST00000152066,ENSMUST00000154975,ENSMUST00000155300,NM_025281,uc008xgg.2,uc008xgh.2_5end
|cluster_id=chr5:38611720..38611799,+
|description=CAGE_peak_1_at_Lyar_5end
|id=chr5:38611720..38611799,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!1.58e-12!147;UBERON:0002323!8.28e-11!37;UBERON:0004458!8.28e-11!37;UBERON:0003886!1.03e-10!38;UBERON:0002553!1.32e-10!39;UBERON:0000926!5.02e-10!193;UBERON:0004120!5.02e-10!193;UBERON:0006603!5.02e-10!193;UBERON:0000077!4.75e-09!97;UBERON:0001041!5.22e-09!92;UBERON:0000464!3.54e-08!57;UBERON:0002075!1.12e-07!19;UBERON:0004177!2.74e-07!29;UBERON:0000466!3.70e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0002323,8.28e-11,37;UBERON:0004458,8.28e-11,37;UBERON:0003886,1.03e-10,38;UBERON:0002553,1.32e-10,39;UBERON:0001048,4.25e-08,134;UBERON:0002075,1.12e-07,19;UBERON:0004177,2.74e-07,29;UBERON:0005057,2.74e-07,29;UBERON:0000153,5.74e-07,43
|phase1_expression=19.6983081938897,4.88565570695105,1.81999695755814,3.62957053568196,5.00895729946347,19.1382369979554,23.8284893407436,18.4646352521454,145.716327426975,146.056264424924,131.324181628962,149.094165162284,24.4817043801624,20.0192721539504,67.2881718867639,53.6559458583039,36.3772176626636,26.0256286420546,24.5434836154272,16.9755860719212,140.831688490172,29.9858672626674,37.3515698468678,16.1592347021341,15.5998311125676,6.31655160526522,9.90752591165872,13.3592164265251,7.41091335879858,14.8697776558359,19.9557459589774,18.4158895303293,17.221814052368,15.8481681015439,28.8851619751275,38.5664377231702,33.0754357145038,10.0447591376858,14.8453715459522,14.6586648312664,5.88231488031014,6.83045484958446,11.1667381197165,16.366586336825,12.8748702648783,17.6204882075214,6.25913075478431,8.06693078607652,4.39372365468944,6.9994763666742,11.8988458381558,2.87505128729943,28.019695211642,25.3876749703971,35.6259427091012,20.0662360108039,14.6132054368766,11.3447860301037,14.3644687210314,8.46385566835253,8.23980824558033,9.14880236586657,3.55717918444456,4.04954872776629,7.9109309005358,2.1314403448383,3.59520132622086,2.30530983192933,25.611334240194,16.4707244764663,23.5563956713548,11.9973413449598,14.3564551618549,23.6407242484861,24.2489041676138,22.0612508786405,9.91042928994498,10.214987046815,17.2039317246993,14.2437190748609,15.3699241252048,16.1483144872596,11.4465029590566,11.8180148106653,14.2102370432433,11.490514833473,17.2269733766915,14.3527573285481,34.0767869999328,22.6714680320357,15.9425468785923,15.487629785665,42.1582226898805,18.8896117073236,10.3964226791627,20.1612099193801,43.5377702408431,26.9279909673331,19.743736349818,27.2071472372962,12.1125341007945,16.6824420638613,5.09610479413291,28.4426681261332,31.6076919876373,34.2035818391383,35.3867111510348,40.8778289394235,61.6272163080269,13.8051189330287,27.7576522825817,23.748307308347,21.2166257475574,14.9215414147096,20.9307898701555,17.0906564208359,16.8092578059374,33.4024514484996,33.6152009740952,33.9710384889559,28.9302389183116,25.6983884161668,20.5030937339934,13.4679166625312,9.84399522023239,17.1156226989756,48.045864926874,59.9902730993408,49.6844587855683,15.8778077769112,14.1825186873774,15.8324483662209,17.3824320192276,13.2972037811772,14.5451631191692,9.5722345209977,30.5518091550949,22.6420686510369,25.7777213602348,40.6152781860895,39.2963737747365,28.0480567408837,31.3308105861308,29.5381442958002,22.7922272156948,32.9252261132064,27.0797983977616,60.5365887529297,63.5925579151885,44.2508227592697,39.5890029368885,35.071317188412,28.9169139194622,32.7357036530837,27.3690241422565,34.8309966932363,68.1146791693838,66.1384121284818,57.1168633785141,29.4118597000413,30.0193356775803,25.0286265430811,28.6461130058104,23.4149435779411,18.5120535464854,22.0907247512887,21.7301455133692,21.9518843650279,28.1397343352052,21.5059377943615,25.6988126260363,22.3685980760758,25.0287131431798,23.3519168643047,13.0379768109759,15.7444056940305,6.27795687669216,35.1719253662514,45.2171091134696,45.0539143409251,46.2634186146315,36.3030344322017,21.5706702529524,22.6368495073945,26.5736274464927,18.4462829290892,16.5881237808178,18.1050389557447,22.0309418444606,22.4704852163555,14.6973873914792,17.7235733196387,32.62287896393,45.0139139682332,43.9560169125014,29.5294425375706,29.6747305366467,28.8959577948112,19.6033265085198,22.8795729368383,17.4268587903926,14.8076596706161,23.7162101669719,92.5990336724322,95.7242306201299,82.5243952452413,53.3522119251763,40.517762838406,26.2264627334862,25.892652370573,20.9154442539796,31.8491239298175,21.5652309791032,14.8856379067401,15.9139213288426,25.5104666726583,25.2950353065896,12.5435315554475,19.7685913478267,45.6674302366868,53.6154772494265,34.9674876696888,26.9893785531777,22.2783322397615,25.2326259339175,18.9279638422065,22.2265553189729,20.1532867580385,18.8156627015835,15.5670148979951,17.2684981865896,18.2257813812705,9.04747703635634,10.8781136763742,42.2917274796371,33.9402197954821,12.2018448390722,8.90808818100744,54.2624669196796,20.1976741763498,30.2887890639606,21.0836921920185,24.3428439438063,25.3306925829705,22.5026660823218,15.286132662597,16.5972387686707,16.6585839009448,18.1832377855401,12.8528526568723,25.8330955079049,20.1214132143998,28.6681048462294,29.3646818891113,74.3372774703792,53.6545205902509,50.1857104561487,49.6031359758012,36.0268309314543,43.9632261559816,34.3709629913734,31.9909681940205,34.580245703318,72.3724175673019,54.8176764589994,52.5991270565753,20.0859367394735,36.552402088356,21.085465456589,23.7914108885067,22.8768901398533,18.3719882130133,19.7458824722545,6.39376393140658,38.0168167063211,17.5820618816971,27.7865781549252,32.1528193235886,23.7352707242981,36.006816182109,26.9781497447088,35.7827161444234,21.569581910609,15.2048747648618,41.8633657954739,41.0709867246813,59.2622487583077,39.9341128849945,48.5264508409639,35.6893950202175,38.9250604685929,37.227086318093,39.6633924818696,42.005507192665,48.3994070179137,41.0705323596234,35.4257517895508,35.7540986184741,29.2605835419878,27.7820553552731,21.655205400038,14.9200886930897,11.7949625695532,25.474911836564,879.924677286021,38.2762357872586,29.7825282822776,40.83474955225,33.8398737511655,38.3530404864066,28.635166229564,40.4935636864685,45.0895181030557,354.887073493403,479.569960419346,29.7050453390488,35.6796378910689,46.2199307241723,69.6375611160981,56.2143824395892,48.2795692118474,42.308798231029,48.7375439676105,42.9107412279627,39.5513326539449,31.3569435775574,38.0085734885034,37.7150419230091,21.2715961970455,26.9809156502102,89.4603392097481,103.619504383944,71.6867311874615,22.6031825017663,29.6538311212868,28.9379566342279,28.7253627965948,33.103758866334,16.942555278512,22.0956113523445,9.73922372846974,11.5141632170271,6.85082519770642,8.3093328712867,14.1754725048679,12.6089936902782,13.1411298605419,12.4262474820437,59.6777248609016,47.4839599347227,36.5369916313847,42.3005687698832,39.6168877366887,22.4289080309017,23.7803998747728,21.8397160673228,22.7852638810189,26.0278128116711,24.5874920893533,24.710050721576,21.7248297330127,25.1618848951136,25.4439127473367,23.3383908728706,27.6963539008205,24.3065617784268,21.8405527425753,24.1406229020412,22.6293706574374,22.3619515760765,21.4592570952589,21.6566160782169,23.7155638646633,22.0844126597276,25.2440602564426,22.3609254722166,22.2718746707213,25.812544496256,23.2524635523381,19.9964099222394,18.415396942636,20.6065998777335,21.0268205969444,15.7380664100906,20.8199131516413,24.495300161506,19.511409871022,21.838550492832,28.7516116169323
|phase1_expression=19.6983081938897,4.88565570695105,1.81999695755814,3.62957053568196,5.00895729946347,19.1382369979554,23.8284893407436,18.4646352521454,145.716327426975,146.056264424924,131.324181628962,149.094165162284,24.4817043801624,20.0192721539504,67.2881718867639,53.6559458583039,36.3772176626636,26.0256286420546,24.5434836154272,16.9755860719212,140.831688490172,29.9858672626674,37.3515698468678,16.1592347021341,15.5998311125676,6.31655160526522,9.90752591165872,13.3592164265251,7.41091335879858,14.8697776558359,19.9557459589774,18.4158895303293,17.221814052368,15.8481681015439,28.8851619751275,38.5664377231702,33.0754357145038,10.0447591376858,14.8453715459522,14.6586648312664,5.88231488031014,6.83045484958446,11.1667381197165,16.366586336825,12.8748702648783,17.6204882075214,6.25913075478431,8.06693078607652,4.39372365468944,6.9994763666742,11.8988458381558,2.87505128729943,28.019695211642,25.3876749703971,35.6259427091012,20.0662360108039,14.6132054368766,11.3447860301037,14.3644687210314,8.46385566835253,8.23980824558033,9.14880236586657,3.55717918444456,4.04954872776629,7.9109309005358,2.1314403448383,3.59520132622086,2.30530983192933,25.611334240194,16.4707244764663,23.5563956713548,11.9973413449598,14.3564551618549,23.6407242484861,24.2489041676138,22.0612508786405,9.91042928994498,10.214987046815,17.2039317246993,14.2437190748609,15.3699241252048,16.1483144872596,11.4465029590566,11.8180148106653,14.2102370432433,11.490514833473,17.2269733766915,14.3527573285481,34.0767869999328,22.6714680320357,15.9425468785923,15.487629785665,42.1582226898805,18.8896117073236,10.3964226791627,20.1612099193801,43.5377702408431,26.9279909673331,19.743736349818,27.2071472372962,12.1125341007945,16.6824420638613,5.09610479413291,28.4426681261332,31.6076919876373,34.2035818391383,35.3867111510348,40.8778289394235,61.6272163080269,13.8051189330287,27.7576522825817,23.748307308347,21.2166257475574,14.9215414147096,20.9307898701555,17.0906564208359,16.8092578059374,33.4024514484996,33.6152009740952,33.9710384889559,28.9302389183116,25.6983884161668,20.5030937339934,13.4679166625312,9.84399522023239,17.1156226989756,48.045864926874,59.9902730993408,49.6844587855683,15.8778077769112,14.1825186873774,15.8324483662209,17.3824320192276,13.2972037811772,14.5451631191692,9.5722345209977,30.5518091550949,22.6420686510369,25.7777213602348,40.6152781860895,39.2963737747365,28.0480567408837,31.3308105861308,29.5381442958002,22.7922272156948,32.9252261132064,27.0797983977616,60.5365887529297,63.5925579151885,44.2508227592697,39.5890029368885,35.071317188412,28.9169139194622,32.7357036530837,27.3690241422565,34.8309966932363,68.1146791693838,66.1384121284818,57.1168633785141,29.4118597000413,30.0193356775803,25.0286265430811,28.6461130058104,23.4149435779411,18.5120535464854,22.0907247512887,21.7301455133692,21.9518843650279,28.1397343352052,21.5059377943615,25.6988126260363,22.3685980760758,25.0287131431798,23.3519168643047,13.0379768109759,15.7444056940305,6.27795687669216,35.1719253662514,45.2171091134696,45.0539143409251,46.2634186146315,36.3030344322017,21.5706702529524,22.6368495073945,26.5736274464927,18.4462829290892,16.5881237808178,18.1050389557447,22.0309418444606,22.4704852163555,14.6973873914792,17.7235733196387,32.62287896393,45.0139139682332,43.9560169125014,29.5294425375706,29.6747305366467,28.8959577948112,19.6033265085198,22.8795729368383,17.4268587903926,14.8076596706161,23.7162101669719,92.5990336724322,95.7242306201299,82.5243952452413,53.3522119251763,40.517762838406,26.2264627334862,25.892652370573,20.9154442539796,31.8491239298175,21.5652309791032,14.8856379067401,15.9139213288426,25.5104666726583,25.2950353065896,12.5435315554475,19.7685913478267,45.6674302366868,53.6154772494265,34.9674876696888,26.9893785531777,22.2783322397615,25.2326259339175,18.9279638422065,22.2265553189729,20.1532867580385,18.8156627015835,15.5670148979951,17.2684981865896,18.2257813812705,9.04747703635634,10.8781136763742,42.2917274796371,33.9402197954821,12.2018448390722,8.90808818100744,54.2624669196796,20.1976741763498,30.2887890639606,21.0836921920185,24.3428439438063,25.3306925829705,22.5026660823218,15.286132662597,16.5972387686707,16.6585839009448,18.1832377855401,12.8528526568723,25.8330955079049,20.1214132143998,28.6681048462294,29.3646818891113,74.3372774703792,53.6545205902509,50.1857104561487,49.6031359758012,36.0268309314543,43.9632261559816,34.3709629913734,31.9909681940205,34.580245703318,72.3724175673019,54.8176764589994,52.5991270565753,20.0859367394735,36.552402088356,21.085465456589,23.7914108885067,22.8768901398533,18.3719882130133,19.7458824722545,6.39376393140658,38.0168167063211,17.5820618816971,27.7865781549252,32.1528193235886,23.7352707242981,36.006816182109,26.9781497447088,35.7827161444234,21.569581910609,15.2048747648618,41.8633657954739,41.0709867246813,59.2622487583077,39.9341128849945,48.5264508409639,35.6893950202175,38.9250604685929,37.227086318093,39.6633924818696,42.005507192665,48.3994070179137,41.0705323596234,35.4257517895508,35.7540986184741,29.2605835419878,27.7820553552731,21.655205400038,14.9200886930897,11.7949625695532,25.474911836564,879.924677286021,38.2762357872586,29.7825282822776,40.83474955225,33.8398737511655,38.3530404864066,28.635166229564,40.4935636864685,45.0895181030557,354.887073493403,479.569960419346,29.7050453390488,35.6796378910689,46.2199307241723,69.6375611160981,56.2143824395892,48.2795692118474,42.308798231029,48.7375439676105,42.9107412279627,39.5513326539449,31.3569435775574,38.0085734885034,37.7150419230091,21.2715961970455,26.9809156502102,89.4603392097481,103.619504383944,71.6867311874615,22.6031825017663,29.6538311212868,28.9379566342279,28.7253627965948,33.103758866334,16.942555278512,22.0956113523445,9.73922372846974,11.5141632170271,6.85082519770642,8.3093328712867,14.1754725048679,12.6089936902782,13.1411298605419,12.4262474820437,59.6777248609016,47.4839599347227,36.5369916313847,42.3005687698832,39.6168877366887,22.4289080309017,23.7803998747728,21.8397160673228,22.7852638810189,26.0278128116711,24.5874920893533,24.710050721576,21.7248297330127,25.1618848951136,25.4439127473367,23.3383908728706,27.6963539008205,24.3065617784268,21.8405527425753,24.1406229020412,22.6293706574374,22.3619515760765,21.4592570952589,21.6566160782169,23.7155638646633,22.0844126597276,25.2440602564426,22.3609254722166,22.2718746707213,25.812544496256,23.2524635523381,19.9964099222394,18.415396942636,20.6065998777335,21.0268205969444,15.7380664100906,20.8199131516413,24.495300161506,19.511409871022,21.838550492832,28.7516116169323
|short_description=p1@Lyar
}}
}}

Latest revision as of 00:38, 26 September 2015

Short description:p1@Lyar
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lyar_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000123207, ENSMUST00000130721, ENSMUST00000132190, ENSMUST00000152066, ENSMUST00000154975, ENSMUST00000155300, NM_025281, uc008xgg.2, uc008xgh.2_5end
EntrezGene:Lyar
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Lyar

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.83
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7145.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2146.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6131.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1149.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A167.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A353.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A536.38
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.03
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3140.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I937.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.60
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I213.36
Ileum epithelium, pool1.CNhs13199.10252-104B97.41
Ileum epithelium, pool2.CNhs13232.10253-104C114.87
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.62
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.35
Mouse Schwann, donor1.CNhs12507.11728-123D934.08
Mouse Schwann, donor2.CNhs12573.11746-123F922.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C442.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.39
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B640.88
accessory axillary lymph node, adult.CNhs10475.1063-29H961.63
adrenal gland, adult.CNhs10508.49-24D713.81
adrenal gland, embryo E14.CNhs11038.406-44C527.76
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F514.92
adrenal gland, neonate N00.CNhs11191.1311-23C120.93
adrenal gland, neonate N25.CNhs11223.1377-27I317.09
amnion, adult pregnant day17.5.CNhs10488.583-22A816.81
aorta, adult.CNhs10498.46-23H133.40
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F533.97
bone (os femoris), neonate N16.CNhs11225.1525-43A628.93
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H717.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C748.05
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D159.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D449.68
corpora quadrigemina, adult.CNhs10501.16-22A415.88
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F115.83
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.64
epididymis, adult.CNhs10490.58-23B225.78
eyeball, adult.CNhs10484.31-12G440.62
eyeball, embryo E12.CNhs11016.345-16C639.30
eyeball, embryo E14.CNhs10521.399-16E228.05
eyeball, embryo E15.CNhs10593.426-16C931.33
eyeball, embryo E17.CNhs11023.1261-18D429.54
eyeball, neonate N00.CNhs11207.633-15C622.79
eyeball, neonate N01.CNhs11140.1532-43E732.93
eyeball, neonate N02.CNhs11205.1551-44G827.08
eyeball, neonate N16.CNhs11188.777-19A260.54
forelimb, embryo E11.CNhs10596.335-25E263.59
forelimb, embryo E12.CNhs10600.359-14H244.25
forelimb, embryo E13.CNhs10589.384-1E239.59
forelimb, embryo E14.CNhs10577.413-26A835.07
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C432.74
forelimb, embryo E18.CNhs11008.1520-43B527.37
gonad, embryo E13.CNhs11044.1564-45I634.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C868.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D266.14
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D557.12
heart, embryo E11.CNhs10586.331-24E929.41
heart, embryo E12.CNhs11015.353-12F530.02
heart, embryo E13.CNhs11013.376-3I925.03
heart, embryo E14.CNhs10597.403-26D428.65
heart, embryo E15.CNhs11017.431-16C823.41
heart, embryo E16.CNhs11021.457-17C618.51
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G321.73
heart, neonate N00.CNhs11213.639-21E321.95
heart, neonate N03.CNhs11221.1349-25I228.14
heart, neonate N10.CNhs11118.749-24G121.51
heart, neonate N16.CNhs11209.782-15G125.70
heart, neonate N20.CNhs11127.821-26I622.37
heart, neonate N25.CNhs11196.1351-25D325.03
heart, neonate N30.CNhs11202.1390-42D223.35
hippocampus, adult.CNhs10478.13-16E813.04
hippocampus, neonate N00.CNhs11228.627-43G115.74
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A335.17
intestine, embryo E12.CNhs11019.1251-16I545.22
intestine, embryo E13.CNhs11010.381-16D545.05
intestine, embryo E15.CNhs10602.976-16D846.26
intestine, embryo E16.CNhs10585.463-22H436.30
intestine, embryo E17.CNhs10582.482-18D321.57
intestine, embryo E18.CNhs10526.1289-20F722.64
intestine, neonate N00.CNhs11126.644-26D126.57
intestine, neonate N01.CNhs11192.1322-23E918.45
intestine, neonate N06.CNhs11102.688-20B816.59
intestine, neonate N07.CNhs11095.720-20F218.11
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E314.70
intestine, neonate N30.CNhs11131.1384-42G117.72
kidney, embryo E14.CNhs10606.411-4I932.62
kidney, embryo E15.CNhs10997.434-16F845.01
kidney, embryo E16.CNhs10584.464-22A543.96
kidney, embryo E17.CNhs11028.483-18I229.53
kidney, embryo E18.CNhs11001.1288-20C729.67
kidney, neonate N00.CNhs11214.646-21G728.90
kidney, neonate N10.CNhs11206.758-6D519.60
kidney, neonate N20.CNhs11113.832-19I122.88
kidney, neonate N25.CNhs11122.1353-25F317.43
kidney, neonate N30.CNhs11203.1385-42H114.81
liver, adult pregnant day01.CNhs10466.508-5B223.72
liver, embryo E12.CNhs10601.355-15F892.60
liver, embryo E13.CNhs10524.378-3H695.72
liver, embryo E14.CNhs10594.409-16E182.52
liver, embryo E15.CNhs10520.433-16D753.35
liver, embryo E16.CNhs10523.462-17F540.52
liver, embryo E17.CNhs10510.481-18A326.23
liver, embryo E18.CNhs10579.499-43G425.89
liver, neonate N00.CNhs11117.641-24F420.92
liver, neonate N03.CNhs11123.1345-25G231.85
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B915.91
liver, neonate N20.CNhs11220.823-25A325.51
liver, neonate N25.CNhs11198.1368-26H125.30
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G245.67
lung, embryo E14.CNhs10604.404-26F853.62
lung, embryo E15.CNhs11020.432-17C534.97
lung, embryo E16.CNhs10998.458-17B626.99
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I625.23
lung, neonate N00.CNhs11224.640-42C618.93
lung, neonate N06.CNhs11212.683-20E522.23
lung, neonate N07.CNhs11111.715-19A320.15
lung, neonate N10.CNhs11219.750-23E618.82
lung, neonate N20.CNhs11109.822-18A415.57
lung, neonate N25.CNhs11119.1359-25C717.27
lung, neonate N30.CNhs11133.1394-42H218.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B642.29
mammary gland, adult pregnant day19.CNhs10476.588-5H233.94
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C754.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E130.29
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I725.83
ovary, embryo E18.CNhs11040.505-44H720.12
ovary, neonate N00.CNhs11217.1299-22I428.67
oviduct, adult pregnant day01.CNhs10500.988-6G629.36
pancreas, adult.CNhs10486.34-16E474.34
pancreas, embryo E14.CNhs11012.405-44F453.65
pancreas, embryo E15.CNhs11042.1556-45F250.19
pancreas, embryo E16.CNhs11003.460-26E549.60
pancreas, embryo E17.CNhs10599.1558-45G336.03
pancreas, embryo E18.CNhs10580.1535-43I743.96
pancreas, neonate N00.CNhs11105.645-26G934.37
pancreas, neonate N01.CNhs11138.1531-43D731.99
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B672.37
pancreas, neonate N25.CNhs11094.1555-45E254.82
pancreas, neonate N30.CNhs11182.1548-44H552.60
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E636.55
pituitary gland, embryo E13.CNhs11009.370-44C721.09
pituitary gland, embryo E14.CNhs11037.398-44A523.79
pituitary gland, embryo E15.CNhs10592.427-16B922.88
pituitary gland, embryo E16.CNhs11036.449-43F618.37
pituitary gland, embryo E17.CNhs11039.1265-44F519.75
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I738.02
placenta, adult pregnant day17.CNhs10464.577-18G317.58
prostate, adult.CNhs10470.859-1F827.79
skin, adult.CNhs10492.30-1C332.15
skin, neonate N00.CNhs11124.650-25G423.74
skin, neonate N03.CNhs11215.662-22H336.01
skin, neonate N06.CNhs11097.693-20I526.98
skin, neonate N10.CNhs11108.762-6C435.78
small intestine, neonate N16.CNhs11114.790-21I121.57
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G241.86
spleen, embryo E16.CNhs11035.461-43C141.07
spleen, embryo E18.CNhs11011.1271-21F259.26
spleen, neonate N10.CNhs11116.752-24D139.93
spleen, neonate N20.CNhs11112.824-19H148.53
spleen, neonate N25.CNhs11099.1354-25G335.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C638.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.66
stomach, adult.CNhs10503.33-1H642.01
stomach, embryo E12.CNhs10588.356-43E348.40
stomach, embryo E15.CNhs10603.1252-16G841.07
stomach, embryo E16.CNhs11022.459-17D435.43
stomach, embryo E17.CNhs11006.1035-18D535.75
stomach, embryo E18.CNhs10999.1286-20C629.26
stomach, neonate N03.CNhs11193.1340-24B827.78
stomach, neonate N07.CNhs11210.718-18A921.66
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C125.47
testis, adult.CNhs10504.57-7G5879.92
testis, embryo E13.CNhs11031.389-23F538.28
testis, embryo E15.CNhs11034.443-27C529.78
testis, embryo E16.CNhs11033.470-26G540.83
testis, embryo E17.CNhs11029.486-18I533.84
testis, embryo E18.CNhs11027.503-18G538.35
testis, neonate N00.CNhs11189.1300-22B728.64
testis, neonate N07.CNhs11222.726-26I440.49
testis, neonate N10.CNhs11204.763-44D945.09
testis, neonate N20.CNhs11110.839-18H3354.89
testis, neonate N30.CNhs11130.1391-42E2479.57
thymus, adult.CNhs10471.38-12B529.71
thymus, embryo E14.CNhs11041.402-44I435.68
thymus, embryo E15.CNhs11005.430-45I246.22
thymus, embryo E16.CNhs11002.456-26C569.64
thymus, embryo E17.CNhs10581.478-18C156.21
thymus, embryo E18.CNhs10595.1273-19G448.28
thymus, neonate N02.CNhs11181.1541-43F842.31
thymus, neonate N03.CNhs11137.2104-43C748.74
thymus, neonate N06.CNhs11197.681-26C442.91
thymus, neonate N07.CNhs11211.713-19D339.55
thymus, neonate N10.CNhs11194.748-24E431.36
thymus, neonate N20.CNhs11186.820-7A238.01
thymus, neonate N25.CNhs11125.1362-25G737.72
thymus, neonate N30.CNhs11132.1393-42G221.27
tongue, adult.CNhs10499.32-1B426.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H389.46
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7103.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G571.69
urinary bladder, adult.CNhs10481.879-12E422.60
uterus, adult pregnant day19.CNhs10497.590-15F529.65
uterus, adult.CNhs10509.92-27E528.94
vagina, adult.CNhs10502.89-27D528.73
vesicular gland, adult.CNhs10491.51-27F833.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I859.68
whole body, embryo E12.CNhs10587.857-27C947.48
whole body, embryo E13.CNhs10512.372-23H236.54
whole body, embryo E14.5.CNhs10578.420-27D242.30
whole body, embryo E14.CNhs10519.395-14B139.62
whole body, embryo E16.CNhs10514.453-14F222.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I515.74
whole body, embryo E18.CNhs10516.493-3B320.82
whole body, neonate N00.CNhs10525.657-19C224.50
whole body, neonate N01.CNhs10576.659-23C619.51
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B428.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
body cavity8.28e-1137
body cavity or lining8.28e-1137
body cavity precursor1.03e-1038
anatomical cavity1.32e-1039
primordium4.25e-08134
viscus1.12e-0719
hemopoietic organ2.74e-0729
immune organ2.74e-0729
anterior region of body5.74e-0743