FFCP PHASE1:Mm9::chr5:38611720..38611799,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:38611720..38611799,+
|short_description=p1@Lyar
|description=CAGE_peak_1_at_Lyar_5end
|association_with_transcript=0bp_to_ENSMUST00000123207,ENSMUST0000013...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17089 | |EntrezGene=17089 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=D3YU83,D3Z7N3,D3Z345,D3Z009,D6RDT2,D3Z5X8,Q08288 | |UniProt=D3YU83,D3Z7N3,D3Z345,D3Z009,D6RDT2,D3Z5X8,Q08288 | ||
|association_with_transcript=0bp_to_ENSMUST00000123207,ENSMUST00000130721,ENSMUST00000132190,ENSMUST00000152066,ENSMUST00000154975,ENSMUST00000155300,NM_025281,uc008xgg.2,uc008xgh.2_5end | |||
|cluster_id=chr5:38611720..38611799,+ | |||
|description=CAGE_peak_1_at_Lyar_5end | |||
|id=chr5:38611720..38611799,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.58e-12!147;UBERON:0002323!8.28e-11!37;UBERON:0004458!8.28e-11!37;UBERON:0003886!1.03e-10!38;UBERON:0002553!1.32e-10!39;UBERON:0000926!5.02e-10!193;UBERON:0004120!5.02e-10!193;UBERON:0006603!5.02e-10!193;UBERON:0000077!4.75e-09!97;UBERON:0001041!5.22e-09!92;UBERON:0000464!3.54e-08!57;UBERON:0002075!1.12e-07!19;UBERON:0004177!2.74e-07!29;UBERON:0000466!3.70e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002323,8.28e-11,37;UBERON:0004458,8.28e-11,37;UBERON:0003886,1.03e-10,38;UBERON:0002553,1.32e-10,39;UBERON:0001048,4.25e-08,134;UBERON:0002075,1.12e-07,19;UBERON:0004177,2.74e-07,29;UBERON:0005057,2.74e-07,29;UBERON:0000153,5.74e-07,43 | |||
|phase1_expression=19.6983081938897,4.88565570695105,1.81999695755814,3.62957053568196,5.00895729946347,19.1382369979554,23.8284893407436,18.4646352521454,145.716327426975,146.056264424924,131.324181628962,149.094165162284,24.4817043801624,20.0192721539504,67.2881718867639,53.6559458583039,36.3772176626636,26.0256286420546,24.5434836154272,16.9755860719212,140.831688490172,29.9858672626674,37.3515698468678,16.1592347021341,15.5998311125676,6.31655160526522,9.90752591165872,13.3592164265251,7.41091335879858,14.8697776558359,19.9557459589774,18.4158895303293,17.221814052368,15.8481681015439,28.8851619751275,38.5664377231702,33.0754357145038,10.0447591376858,14.8453715459522,14.6586648312664,5.88231488031014,6.83045484958446,11.1667381197165,16.366586336825,12.8748702648783,17.6204882075214,6.25913075478431,8.06693078607652,4.39372365468944,6.9994763666742,11.8988458381558,2.87505128729943,28.019695211642,25.3876749703971,35.6259427091012,20.0662360108039,14.6132054368766,11.3447860301037,14.3644687210314,8.46385566835253,8.23980824558033,9.14880236586657,3.55717918444456,4.04954872776629,7.9109309005358,2.1314403448383,3.59520132622086,2.30530983192933,25.611334240194,16.4707244764663,23.5563956713548,11.9973413449598,14.3564551618549,23.6407242484861,24.2489041676138,22.0612508786405,9.91042928994498,10.214987046815,17.2039317246993,14.2437190748609,15.3699241252048,16.1483144872596,11.4465029590566,11.8180148106653,14.2102370432433,11.490514833473,17.2269733766915,14.3527573285481,34.0767869999328,22.6714680320357,15.9425468785923,15.487629785665,42.1582226898805,18.8896117073236,10.3964226791627,20.1612099193801,43.5377702408431,26.9279909673331,19.743736349818,27.2071472372962,12.1125341007945,16.6824420638613,5.09610479413291,28.4426681261332,31.6076919876373,34.2035818391383,35.3867111510348,40.8778289394235,61.6272163080269,13.8051189330287,27.7576522825817,23.748307308347,21.2166257475574,14.9215414147096,20.9307898701555,17.0906564208359,16.8092578059374,33.4024514484996,33.6152009740952,33.9710384889559,28.9302389183116,25.6983884161668,20.5030937339934,13.4679166625312,9.84399522023239,17.1156226989756,48.045864926874,59.9902730993408,49.6844587855683,15.8778077769112,14.1825186873774,15.8324483662209,17.3824320192276,13.2972037811772,14.5451631191692,9.5722345209977,30.5518091550949,22.6420686510369,25.7777213602348,40.6152781860895,39.2963737747365,28.0480567408837,31.3308105861308,29.5381442958002,22.7922272156948,32.9252261132064,27.0797983977616,60.5365887529297,63.5925579151885,44.2508227592697,39.5890029368885,35.071317188412,28.9169139194622,32.7357036530837,27.3690241422565,34.8309966932363,68.1146791693838,66.1384121284818,57.1168633785141,29.4118597000413,30.0193356775803,25.0286265430811,28.6461130058104,23.4149435779411,18.5120535464854,22.0907247512887,21.7301455133692,21.9518843650279,28.1397343352052,21.5059377943615,25.6988126260363,22.3685980760758,25.0287131431798,23.3519168643047,13.0379768109759,15.7444056940305,6.27795687669216,35.1719253662514,45.2171091134696,45.0539143409251,46.2634186146315,36.3030344322017,21.5706702529524,22.6368495073945,26.5736274464927,18.4462829290892,16.5881237808178,18.1050389557447,22.0309418444606,22.4704852163555,14.6973873914792,17.7235733196387,32.62287896393,45.0139139682332,43.9560169125014,29.5294425375706,29.6747305366467,28.8959577948112,19.6033265085198,22.8795729368383,17.4268587903926,14.8076596706161,23.7162101669719,92.5990336724322,95.7242306201299,82.5243952452413,53.3522119251763,40.517762838406,26.2264627334862,25.892652370573,20.9154442539796,31.8491239298175,21.5652309791032,14.8856379067401,15.9139213288426,25.5104666726583,25.2950353065896,12.5435315554475,19.7685913478267,45.6674302366868,53.6154772494265,34.9674876696888,26.9893785531777,22.2783322397615,25.2326259339175,18.9279638422065,22.2265553189729,20.1532867580385,18.8156627015835,15.5670148979951,17.2684981865896,18.2257813812705,9.04747703635634,10.8781136763742,42.2917274796371,33.9402197954821,12.2018448390722,8.90808818100744,54.2624669196796,20.1976741763498,30.2887890639606,21.0836921920185,24.3428439438063,25.3306925829705,22.5026660823218,15.286132662597,16.5972387686707,16.6585839009448,18.1832377855401,12.8528526568723,25.8330955079049,20.1214132143998,28.6681048462294,29.3646818891113,74.3372774703792,53.6545205902509,50.1857104561487,49.6031359758012,36.0268309314543,43.9632261559816,34.3709629913734,31.9909681940205,34.580245703318,72.3724175673019,54.8176764589994,52.5991270565753,20.0859367394735,36.552402088356,21.085465456589,23.7914108885067,22.8768901398533,18.3719882130133,19.7458824722545,6.39376393140658,38.0168167063211,17.5820618816971,27.7865781549252,32.1528193235886,23.7352707242981,36.006816182109,26.9781497447088,35.7827161444234,21.569581910609,15.2048747648618,41.8633657954739,41.0709867246813,59.2622487583077,39.9341128849945,48.5264508409639,35.6893950202175,38.9250604685929,37.227086318093,39.6633924818696,42.005507192665,48.3994070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| |phase1_expression=19.6983081938897,4.88565570695105,1.81999695755814,3.62957053568196,5.00895729946347,19.1382369979554,23.8284893407436,18.4646352521454,145.716327426975,146.056264424924,131.324181628962,149.094165162284,24.4817043801624,20.0192721539504,67.2881718867639,53.6559458583039,36.3772176626636,26.0256286420546,24.5434836154272,16.9755860719212,140.831688490172,29.9858672626674,37.3515698468678,16.1592347021341,15.5998311125676,6.31655160526522,9.90752591165872,13.3592164265251,7.41091335879858,14.8697776558359,19.9557459589774,18.4158895303293,17.221814052368,15.8481681015439,28.8851619751275,38.5664377231702,33.0754357145038,10.0447591376858,14.8453715459522,14.6586648312664,5.88231488031014,6.83045484958446,11.1667381197165,16.366586336825,12.8748702648783,17.6204882075214,6.25913075478431,8.06693078607652,4.39372365468944,6.9994763666742,11.8988458381558,2.87505128729943,28.019695211642,25.3876749703971,35.6259427091012,20.0662360108039,14.6132054368766,11.3447860301037,14.3644687210314,8.46385566835253,8.23980824558033,9.14880236586657,3.55717918444456,4.04954872776629,7.9109309005358,2.1314403448383,3.59520132622086,2.30530983192933,25.611334240194,16.4707244764663,23.5563956713548,11.9973413449598,14.3564551618549,23.6407242484861,24.2489041676138,22.0612508786405,9.91042928994498,10.214987046815,17.2039317246993,14.2437190748609,15.3699241252048,16.1483144872596,11.4465029590566,11.8180148106653,14.2102370432433,11.490514833473,17.2269733766915,14.3527573285481,34.0767869999328,22.6714680320357,15.9425468785923,15.487629785665,42.1582226898805,18.8896117073236,10.3964226791627,20.1612099193801,43.5377702408431,26.9279909673331,19.743736349818,27.2071472372962,12.1125341007945,16.6824420638613,5.09610479413291,28.4426681261332,31.6076919876373,34.2035818391383,35.3867111510348,40.8778289394235,61.6272163080269,13.8051189330287,27.7576522825817,23.748307308347,21.2166257475574,14.9215414147096,20.9307898701555,17.0906564208359,16.8092578059374,33.4024514484996,33.6152009740952,33.9710384889559,28.9302389183116,25.6983884161668,20.5030937339934,13.4679166625312,9.84399522023239,17.1156226989756,48.045864926874,59.9902730993408,49.6844587855683,15.8778077769112,14.1825186873774,15.8324483662209,17.3824320192276,13.2972037811772,14.5451631191692,9.5722345209977,30.5518091550949,22.6420686510369,25.7777213602348,40.6152781860895,39.2963737747365,28.0480567408837,31.3308105861308,29.5381442958002,22.7922272156948,32.9252261132064,27.0797983977616,60.5365887529297,63.5925579151885,44.2508227592697,39.5890029368885,35.071317188412,28.9169139194622,32.7357036530837,27.3690241422565,34.8309966932363,68.1146791693838,66.1384121284818,57.1168633785141,29.4118597000413,30.0193356775803,25.0286265430811,28.6461130058104,23.4149435779411,18.5120535464854,22.0907247512887,21.7301455133692,21.9518843650279,28.1397343352052,21.5059377943615,25.6988126260363,22.3685980760758,25.0287131431798,23.3519168643047,13.0379768109759,15.7444056940305,6.27795687669216,35.1719253662514,45.2171091134696,45.0539143409251,46.2634186146315,36.3030344322017,21.5706702529524,22.6368495073945,26.5736274464927,18.4462829290892,16.5881237808178,18.1050389557447,22.0309418444606,22.4704852163555,14.6973873914792,17.7235733196387,32.62287896393,45.0139139682332,43.9560169125014,29.5294425375706,29.6747305366467,28.8959577948112,19.6033265085198,22.8795729368383,17.4268587903926,14.8076596706161,23.7162101669719,92.5990336724322,95.7242306201299,82.5243952452413,53.3522119251763,40.517762838406,26.2264627334862,25.892652370573,20.9154442539796,31.8491239298175,21.5652309791032,14.8856379067401,15.9139213288426,25.5104666726583,25.2950353065896,12.5435315554475,19.7685913478267,45.6674302366868,53.6154772494265,34.9674876696888,26.9893785531777,22.2783322397615,25.2326259339175,18.9279638422065,22.2265553189729,20.1532867580385,18.8156627015835,15.5670148979951,17.2684981865896,18.2257813812705,9.04747703635634,10.8781136763742,42.2917274796371,33.9402197954821,12.2018448390722,8.90808818100744,54.2624669196796,20.1976741763498,30.2887890639606,21.0836921920185,24.3428439438063,25.3306925829705,22.5026660823218,15.286132662597,16.5972387686707,16.6585839009448,18.1832377855401,12.8528526568723,25.8330955079049,20.1214132143998,28.6681048462294,29.3646818891113,74.3372774703792,53.6545205902509,50.1857104561487,49.6031359758012,36.0268309314543,43.9632261559816,34.3709629913734,31.9909681940205,34.580245703318,72.3724175673019,54.8176764589994,52.5991270565753,20.0859367394735,36.552402088356,21.085465456589,23.7914108885067,22.8768901398533,18.3719882130133,19.7458824722545,6.39376393140658,38.0168167063211,17.5820618816971,27.7865781549252,32.1528193235886,23.7352707242981,36.006816182109,26.9781497447088,35.7827161444234,21.569581910609,15.2048747648618,41.8633657954739,41.0709867246813,59.2622487583077,39.9341128849945,48.5264508409639,35.6893950202175,38.9250604685929,37.227086318093,39.6633924818696,42.005507192665,48.3994070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| ||
|short_description=p1@Lyar | |||
}} | }} |
Latest revision as of 00:38, 26 September 2015
Short description: | p1@Lyar |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lyar_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000123207, ENSMUST00000130721, ENSMUST00000132190, ENSMUST00000152066, ENSMUST00000154975, ENSMUST00000155300, NM_025281, uc008xgg.2, uc008xgh.2_5end |
EntrezGene: | Lyar |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
body cavity | 8.28e-11 | 37 |
body cavity or lining | 8.28e-11 | 37 |
body cavity precursor | 1.03e-10 | 38 |
anatomical cavity | 1.32e-10 | 39 |
primordium | 4.25e-08 | 134 |
viscus | 1.12e-07 | 19 |
hemopoietic organ | 2.74e-07 | 29 |
immune organ | 2.74e-07 | 29 |
anterior region of body | 5.74e-07 | 43 |