FFCP PHASE2:Mm9::chr10:80720022..80720054,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:17179 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:P41242,uniprot:D3Z4T5,uniprot:D6RGA0 |associ...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=17179 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P41242,D3Z4T5,D6RGA0 | ||
|association_with_transcript=0bp_to_ENSMUST00000105328,ENSMUST00000117488,ENSMUST00000121205,ENSMUST00000128576_5end | |association_with_transcript=0bp_to_ENSMUST00000105328,ENSMUST00000117488,ENSMUST00000121205,ENSMUST00000128576_5end | ||
|cluster_id=chr10:80720022..80720054,+ | |cluster_id=chr10:80720022..80720054,+ | ||
Latest revision as of 10:53, 26 September 2015
| Short description: | p2@Matk |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Matk_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 0bp_to_ENSMUST00000105328, ENSMUST00000117488, ENSMUST00000121205, ENSMUST00000128576_5end |
| EntrezGene: | Matk |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Matk |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.62e-08 | 23 |
| neuroblast (sensu Vertebrata) | 3.62e-08 | 23 |
| neuron of the substantia nigra | 8.16e-08 | 3 |
| raphe nuclei neuron | 8.61e-08 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.33e-39 | 54 |
| neural tube | 1.21e-35 | 52 |
| neural rod | 1.21e-35 | 52 |
| future spinal cord | 1.21e-35 | 52 |
| neural keel | 1.21e-35 | 52 |
| central nervous system | 1.66e-31 | 73 |
| nervous system | 1.79e-30 | 75 |
| gray matter | 2.22e-30 | 34 |
| brain | 1.26e-29 | 47 |
| future brain | 1.26e-29 | 47 |
Showing 1 to 10 of 62 entries
