FFCP PHASE2:Mm9::chr6:119280824..119280835,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:211187 |HGNC= |MCL_coexpression_id=189 |TSSclassifier=NA |UniProt=uniprot:Q8BGX3 |association_with_transcript=-40bp...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=211187 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |MCL_coexpression_id=189 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8BGX3 | ||
|association_with_transcript=-40bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | |association_with_transcript=-40bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | ||
|cluster_id=chr6:119280824..119280835,- | |cluster_id=chr6:119280824..119280835,- | ||
Latest revision as of 13:20, 26 September 2015
| Short description: | p6@Lrtm2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Lrtm2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:189 |
| Association with transcript: | -40bp_to_ENSMUST00000068351, NM_172492, uc009dmb.2, uc009dmc.2_5end |
| EntrezGene: | Lrtm2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@Lrtm2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei neuron | 8.41e-14 | 3 |
| neuron of the substantia nigra | 8.16e-13 | 3 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.56e-24 | 54 |
| central nervous system | 1.48e-21 | 73 |
| nervous system | 6.75e-21 | 75 |
| regional part of brain | 9.77e-20 | 46 |
| neural tube | 1.74e-19 | 52 |
| neural rod | 1.74e-19 | 52 |
| future spinal cord | 1.74e-19 | 52 |
| neural keel | 1.74e-19 | 52 |
| brain | 2.94e-19 | 47 |
| future brain | 2.94e-19 | 47 |
Showing 1 to 10 of 49 entries
