FFCP PHASE1:Mm9::chr6:78322884..78322899,-: Difference between revisions
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|id=chr6:78322884..78322899,-
|short_description=p@chr6:78322884..78322899,-
|description=CAGE_peak_at_chr6:78322884..78322899,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78322884..78322899,- | |||
|description=CAGE_peak_at_chr6:78322884..78322899,- | |||
|id=chr6:78322884..78322899,- | |||
|ontology_enrichment_celltype=CL:0000239!5.77e-23!6;CL:0000677!5.77e-23!6;CL:0000212!5.77e-23!6;CL:0000584!5.77e-23!6;CL:0002563!3.37e-20!9;CL:0002251!3.37e-20!9;CL:0000075!1.27e-19!7;CL:0000066!3.82e-14!25;CL:0000473!4.54e-13!3;CL:0000627!4.54e-13!3;CL:0000682!4.54e-13!3;CL:0002076!8.22e-12!15;CL:0000223!1.17e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.32e-23,3;CL:0000239,2.58e-11,6;CL:0000677,2.58e-11,6;CL:0000584,2.58e-11,6;CL:0000066,2.99e-10,25;CL:0000473,4.03e-10,7;CL:0000075,8.77e-10,7;CL:0002563,9.85e-08,9;CL:0002251,9.85e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.66e-35!15;UBERON:0001242!7.44e-29!13;UBERON:0000060!7.44e-29!13;UBERON:0001262!7.44e-29!13;UBERON:0004786!7.44e-29!13;UBERON:0000160!2.28e-23!43;UBERON:0004923!1.99e-21!24;UBERON:0003350!3.37e-20!9;UBERON:0004808!3.37e-20!9;UBERON:0001277!3.37e-20!9;UBERON:0000485!2.17e-16!11;UBERON:0005409!3.23e-16!59;UBERON:0000331!2.61e-13!3;UBERON:0002116!2.61e-13!3;UBERON:0001204!2.61e-13!3;UBERON:0001168!2.61e-13!3;UBERON:0001962!2.28e-08!2;UBERON:0001961!2.28e-08!2;UBERON:0001744!2.28e-08!2;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0004119!1.53e-07!130;UBERON:0000925!1.53e-07!130;UBERON:0006595!1.53e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.57e-23,15;UBERON:0000331,3.35e-23,3;UBERON:0002116,3.35e-23,3;UBERON:0001204,3.35e-23,3;UBERON:0001168,3.35e-23,3;UBERON:0001242,4.48e-20,13;UBERON:0001262,4.48e-20,13;UBERON:0004786,4.48e-20,13;UBERON:0002108,1.41e-17,4;UBERON:0004923,1.90e-14,24;UBERON:0000160,3.19e-11,31;UBERON:0003199,2.89e-08,1;UBERON:0003350,9.85e-08,9;UBERON:0004808,9.85e-08,9;UBERON:0001277,9.85e-08,9;UBERON:0005409,3.08e-07,47 | |||
|phase1_expression=0,3.14077866875425,0.909998478779072,1.20985684522732,2.00358291978539,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.14704640533585,3.44539178469012,4.73838195774982,3.23206849028834,9.88121781173144,2.77233142735924,9.5344119581781,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,6.32511651449993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.14077866875425,0.909998478779072,1.20985684522732,2.00358291978539,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.14704640533585,3.44539178469012,4.73838195774982,3.23206849028834,9.88121781173144,2.77233142735924,9.5344119581781,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,6.32511651449993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78322884..78322899,- | |||
}} | }} |
Latest revision as of 03:30, 6 August 2015
Short description: | p@chr6:78322884..78322899, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78322884..78322899, - |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.32e-23 | 3 |
brush border epithelial cell | 2.58e-11 | 6 |
gut absorptive cell | 2.58e-11 | 6 |
enterocyte | 2.58e-11 | 6 |
epithelial cell | 2.99e-10 | 25 |
defensive cell | 4.03e-10 | 7 |
columnar/cuboidal epithelial cell | 8.77e-10 | 7 |
intestinal epithelial cell | 9.85e-08 | 9 |
epithelial cell of alimentary canal | 9.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.57e-23 | 15 |
ileal mucosa | 3.35e-23 | 3 |
ileum | 3.35e-23 | 3 |
mucosa of small intestine | 3.35e-23 | 3 |
wall of small intestine | 3.35e-23 | 3 |
intestinal mucosa | 4.48e-20 | 13 |
wall of intestine | 4.48e-20 | 13 |
gastrointestinal system mucosa | 4.48e-20 | 13 |
small intestine | 1.41e-17 | 4 |
organ component layer | 1.90e-14 | 24 |
intestine | 3.19e-11 | 31 |
egg chamber | 2.89e-08 | 1 |
epithelium of mucosa | 9.85e-08 | 9 |
gastrointestinal system epithelium | 9.85e-08 | 9 |
intestinal epithelium | 9.85e-08 | 9 |
gastrointestinal system | 3.08e-07 | 47 |