FFCP PHASE1:Mm9::chr7:138079771..138079782,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:138079771..138079782,+
|short_description=p2@Htra1
|description=CAGE_peak_2_at_Htra1_5end
|association_with_transcript=54bp_to_ENSMUST00000006367,NM_019564...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56213 | |EntrezGene=56213 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R118 | |UniProt=Q9R118 | ||
|association_with_transcript=54bp_to_ENSMUST00000006367,NM_019564,uc009kau.2_5end | |||
|cluster_id=chr7:138079771..138079782,+ | |||
|description=CAGE_peak_2_at_Htra1_5end | |||
|id=chr7:138079771..138079782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.57e-09!102;UBERON:0000924!2.57e-09!102;UBERON:0006601!2.57e-09!102;UBERON:0000955!2.10e-08!50;UBERON:0006238!2.10e-08!50;UBERON:0000033!2.53e-08!63;UBERON:0002616!4.67e-08!49;UBERON:0000073!7.98e-08!75;UBERON:0001016!7.98e-08!75;UBERON:0001017!1.39e-07!73;UBERON:0005743!1.39e-07!73;UBERON:0001049!1.53e-07!52;UBERON:0005068!1.53e-07!52;UBERON:0006241!1.53e-07!52;UBERON:0007135!1.53e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.72e-12,95;UBERON:0000924,6.72e-12,95;UBERON:0006601,6.72e-12,95;UBERON:0000073,1.40e-11,54;UBERON:0001017,4.67e-11,73;UBERON:0001016,5.59e-11,75;UBERON:0001049,1.45e-10,52;UBERON:0005068,1.45e-10,52;UBERON:0006241,1.45e-10,52;UBERON:0007135,1.45e-10,52;UBERON:0000955,3.38e-10,47;UBERON:0006238,3.38e-10,47;UBERON:0002616,9.47e-10,46;UBERON:0010371,9.88e-10,73;UBERON:0010314,2.94e-09,92;UBERON:0002346,4.22e-09,64;UBERON:0003075,4.22e-09,64;UBERON:0007284,4.22e-09,64;UBERON:0002021,4.71e-08,10;UBERON:0000411,4.71e-08,10;UBERON:0001950,4.71e-08,10;UBERON:0000025,1.53e-07,114;UBERON:0004111,1.87e-07,122;UBERON:0002619,1.97e-07,17 | |||
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| ||
|short_description=p2@Htra1 | |||
}} | }} |
Latest revision as of 00:38, 26 September 2015
Short description: | p2@Htra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Htra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 54bp_to_ENSMUST00000006367, NM_019564, uc009kau.2_5end |
EntrezGene: | Htra1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.72e-12 | 95 |
ectoderm | 6.72e-12 | 95 |
presumptive ectoderm | 6.72e-12 | 95 |
regional part of nervous system | 1.40e-11 | 54 |
central nervous system | 4.67e-11 | 73 |
nervous system | 5.59e-11 | 75 |
neural tube | 1.45e-10 | 52 |
neural rod | 1.45e-10 | 52 |
future spinal cord | 1.45e-10 | 52 |
neural keel | 1.45e-10 | 52 |
brain | 3.38e-10 | 47 |
future brain | 3.38e-10 | 47 |
regional part of brain | 9.47e-10 | 46 |
ecto-epithelium | 9.88e-10 | 73 |
structure with developmental contribution from neural crest | 2.94e-09 | 92 |
neurectoderm | 4.22e-09 | 64 |
neural plate | 4.22e-09 | 64 |
presumptive neural plate | 4.22e-09 | 64 |
occipital lobe | 4.71e-08 | 10 |
visual cortex | 4.71e-08 | 10 |
neocortex | 4.71e-08 | 10 |
tube | 1.53e-07 | 114 |
anatomical conduit | 1.87e-07 | 122 |
regional part of cerebral cortex | 1.97e-07 | 17 |