FFCP PHASE2:Mm9::chr18:37979197..37979224,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:93703,entrezgene:93706,entrezgene:93707,entrezgene:93708,entrezgene:93711,entrezgene:93716,entrezgene:93717,entrezg...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=93703,93706,93707,93708,93711,93716,93717,93723,93724 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q91XW9 | ||
|association_with_transcript=0bp_to_ENSMUST00000055935,NM_033583,uc008erg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000055935,NM_033583,uc008erg.1_5end | ||
|cluster_id=chr18:37979197..37979224,+ | |cluster_id=chr18:37979197..37979224,+ | ||
Latest revision as of 06:01, 27 September 2015
| Short description: | p3@Pcdhga11, p3@Pcdhga12, p3@Pcdhga3, p3@Pcdhga8, p3@Pcdhga9, p3@Pcdhgb6, p3@Pcdhgc3, p3@Pcdhgc4, p3@Pcdhgc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pcdhga11_5end, CAGE_peak_3_at_Pcdhga12_5end, CAGE_peak_3_at_Pcdhga3_5end, CAGE_peak_3_at_Pcdhga8_5end, CAGE_peak_3_at_Pcdhga9_5end, CAGE_peak_3_at_Pcdhgb6_5end, CAGE_peak_3_at_Pcdhgc3_5end, CAGE_peak_3_at_Pcdhgc4_5end, CAGE_peak_3_at_Pcdhgc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 0bp_to_ENSMUST00000055935, NM_033583, uc008erg.1_5end |
| EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p3@Pcdhga11p3@Pcdhga12p3@Pcdhga3p3@Pcdhga8p3@Pcdhga9p3@Pcdhgb6p3@Pcdhgc3p3@Pcdhgc4p3@Pcdhgc5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 1.24e-11 | 10 |
| neuron associated cell | 1.24e-11 | 10 |
| glial cell (sensu Vertebrata) | 1.24e-11 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.24e-11 | 10 |
| glial cell | 1.24e-11 | 10 |
| glioblast | 1.24e-11 | 10 |
| glioblast (sensu Vertebrata) | 1.24e-11 | 10 |
| oligodendrocyte precursor cell | 6.35e-10 | 8 |
| muscle precursor cell | 5.31e-08 | 6 |
| muscle cell | 5.31e-08 | 6 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 4.77e-24 | 75 |
| regional part of nervous system | 3.65e-23 | 54 |
| central nervous system | 2.41e-22 | 73 |
| brain | 6.24e-22 | 47 |
| future brain | 6.24e-22 | 47 |
| neural tube | 3.46e-21 | 52 |
| neural rod | 3.46e-21 | 52 |
| future spinal cord | 3.46e-21 | 52 |
| neural keel | 3.46e-21 | 52 |
| regional part of brain | 1.02e-20 | 46 |
Showing 1 to 10 of 40 entries
