FFCP PHASE1:Mm9::chr7:30066957..30066992,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:30066957..30066992,-
|short_description=p2@Spint2
|description=CAGE_peak_2_at_Spint2_5end
|association_with_transcript=3bp_to_ENSMUST00000098604,ENSMUST000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20733 | |EntrezGene=20733 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=849 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WU03,Q9D8Q8 | |UniProt=Q9WU03,Q9D8Q8 | ||
|association_with_transcript=3bp_to_ENSMUST00000098604,ENSMUST00000108235,ENSMUST00000108236,ENSMUST00000166639,ENSMUST00000171454,NM_001082548,NM_011464,uc009gbk.1,uc009gbl.1,uc009gbm.1_5end | |||
|cluster_id=chr7:30066957..30066992,- | |||
|description=CAGE_peak_2_at_Spint2_5end | |||
|id=chr7:30066957..30066992,- | |||
|ontology_enrichment_celltype=CL:0000066!3.52e-07!25;CL:0002563!9.31e-07!9;CL:0002251!9.31e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.96e-07,25;CL:0002563,9.29e-07,9;CL:0002251,9.29e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.29e-25!130;UBERON:0000925!2.29e-25!130;UBERON:0006595!2.29e-25!130;UBERON:0001007!8.69e-25!128;UBERON:0001555!8.69e-25!128;UBERON:0007026!8.69e-25!128;UBERON:0004921!1.93e-23!126;UBERON:0004185!1.93e-23!126;UBERON:0000160!4.53e-22!43;UBERON:0005409!6.11e-21!59;UBERON:0000344!1.80e-10!15;UBERON:0002108!1.16e-09!16;UBERON:0000077!1.42e-09!97;UBERON:0001242!3.04e-09!13;UBERON:0000060!3.04e-09!13;UBERON:0001262!3.04e-09!13;UBERON:0004786!3.04e-09!13;UBERON:0000466!1.55e-08!79;UBERON:0000481!1.93e-08!230;UBERON:0001041!3.82e-08!92;UBERON:0000464!4.59e-08!57;UBERON:0001045!8.95e-08!13;UBERON:0001264!3.22e-07!12;UBERON:0003922!3.22e-07!12;UBERON:0002114!3.22e-07!12;UBERON:0003923!3.22e-07!12;UBERON:0003924!3.22e-07!12;UBERON:0003921!3.22e-07!12;UBERON:0000485!4.52e-07!11;UBERON:0004923!6.80e-07!24;UBERON:0003104!8.77e-07!131;UBERON:0009142!8.77e-07!131;UBERON:0003350!9.31e-07!9;UBERON:0004808!9.31e-07!9;UBERON:0001277!9.31e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.00e-18,118;UBERON:0000925,1.00e-18,118;UBERON:0006595,1.00e-18,118;UBERON:0001007,3.16e-18,116;UBERON:0001555,3.16e-18,116;UBERON:0007026,3.16e-18,116;UBERON:0004921,4.65e-17,114;UBERON:0000160,1.16e-15,31;UBERON:0005409,1.36e-14,47;UBERON:0000344,1.79e-10,15;UBERON:0001242,3.03e-09,13;UBERON:0001262,3.03e-09,13;UBERON:0004786,3.03e-09,13;UBERON:0005177,3.45e-08,79;UBERON:0001264,3.21e-07,12;UBERON:0000485,4.50e-07,11;UBERON:0004923,6.78e-07,24;UBERON:0003350,9.29e-07,9;UBERON:0004808,9.29e-07,9;UBERON:0001277,9.29e-07,9 | |||
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|phase1_expression=75.430106986358,393.644259817199,406.769320014245,326.35888400007,363.650299941048,340.291284165401,377.518027202369,43.1271900294865,11.82625266074,11.4691617897777,16.265706981423,10.7692414643704,43.6561861324575,41.4372707466048,4.66353666541928,5.4668322195253,2.09868563438444,22.555544823114,18.2362196695633,15.7024171165271,59.9555195565042,14.7943517289319,15.4107875591972,330.864330336765,365.448984740002,389.903503634099,429.900472166757,389.141046230716,452.445761725626,364.93962789238,537.474757828459,0,0.61506478758457,0,245.235025168832,245.86104048521,268.074364772491,10.8818223991596,10.9386948233332,15.1821885752402,25.2939539853336,24.589637458504,27.6740901227758,0.755380907853464,0.506884656097573,0.734187008646726,1.56478268869608,0.872100625521786,4.61340983742391,4.6663175777828,0.139986421625363,0,10.2347389695219,22.4862264023517,22.5182845425451,0.514518872071894,2.29226751951005,4.64104883049698,7.48570905180512,8.46385566835253,10.775133859605,0.677689064138264,0,0,0.988866362566974,0,3.89480143673926,4.2264013585371,3.21437798156281,3.91517221161903,2.3135745748652,5.14171771926846,8.39300455616131,4.65465037016825,4.02550978276593,8.27296907949019,8.8092704799511,4.85211884723713,3.68655679814984,8.70449499019279,7.593474419,11.4600941522487,5.02529398202486,12.380777420697,8.25110537994775,6.77645746589436,7.54569908235246,6.71038004971082,0.757261933331841,0.377857800533928,72.4661221754194,68.8339101585109,52.3577926954968,85.8128074704129,95.5171333648074,91.3974849678565,90.3057621447164,0,0,0,152.392580198368,0,0,0,187.481241515711,167.217511213565,189.066142435529,117.152660591756,35.7334279433097,9.20341262201914,6.7659277438793,8.8294988710521,9.91646638201052,9.19408107370998,13.0523464920632,5.02666365318702,246.700577798905,8.24216334443496,12.3845477272982,1.7794353494215,2.20841518460394,6.30337829075789,318.729911682989,22.2513405728776,15.9179497178226,247.026972386708,7.54835284387298,3.59941638596045,4.44745794755726,5.84183493678809,9.15001205637253,8.16753288733619,9.90798625095976,4.85859368927628,8.51930982694196,6.48965052271031,42.1614966340309,81.4865657496109,369.480672830032,125.002462396566,13.5325260681212,11.2652031172402,14.7650946440386,17.4817588689429,10.6817303667585,10.1209839025031,11.2442069471675,67.7802831336221,20.47895932862,18.7215019366141,20.9381837755099,31.3449897371432,43.3753708791933,40.3972513165713,52.8860090568415,40.6029904309726,4.91549231119264,5.91900186363845,4.26245249093389,3.52113813310353,10.7881987591304,7.92273070428465,11.6004920436753,7.47704080640135,7.40482141859416,8.13868806626427,9.38956904898667,8.64063533517054,9.2153515951549,16.4167464079095,10.2146700027778,11.8421989814519,12.5143565715899,9.66286215074677,18.0849355765149,9.98174740079059,228.980216607772,199.660177830976,33.4862553340317,47.6085177313899,108.37753497188,142.590251908703,156.998898954478,169.871484118515,175.101223709925,222.014190967967,179.202003874592,193.982560240122,199.643225209979,208.526102807779,194.740382937099,205.712935271761,68.6597801450156,49.2411089347931,77.7683376144255,80.2386231710538,93.4850988147956,80.7263286937567,107.944768871107,121.925982231151,119.790029342969,142.030135673992,89.2322407532318,6.67380422864376,10.2210677458866,7.87017393346988,13.3887680116412,14.7118067448974,30.8097280655518,43.7298128925232,38.4260487456834,37.8894750199552,24.4405951096503,48.3783231969054,49.3019523521006,53.0415643688935,59.201146462231,79.1207375035922,116.025003424628,23.6864264713106,49.2154228854918,65.5216031092226,82.8456576458412,92.4634541078823,101.168547376556,78.8339937345507,66.049125380494,56.0305664811401,51.1849807390534,75.3771247692395,73.9091722386033,80.1355784541574,1.50791283939272,0.54390568381871,186.378659474215,184.049809785257,3.69266356971921,3.7507739709505,0,1.00988370881749,2.83957397474631,2.34263246577983,2.36965737506079,2.62865677747807,1.11399337041197,1.41538265394416,1.61924280669958,3.50707029493574,2.76701444562566,3.85585579706168,49.8209699081023,50.3925658378332,32.2516179520081,110.694952514571,326.553040316309,173.102593578502,205.580018736031,327.795628615751,356.134082814212,215.512038708693,151.697408089746,180.312729820843,191.79558957098,243.98037712645,320.472570067996,289.810876527405,257.03190234411,57.9796722780819,152.901964231216,154.322665222746,185.497884389818,154.289027225791,159.118902922251,254.83716240892,45.5263113643598,127.52290666002,465.535448294025,114.266173288446,56.0281560634792,51.0247344892199,78.6663746980669,85.1891269676868,205.493989824045,3.15223013417866,15.8909919142003,23.5281029478074,10.0005044779644,5.08594833912666,7.24479406921433,8.92234875505438,19.2075625893056,18.3336402543992,16.7221968303353,187.115441130962,36.0623032682494,99.423219425029,116.537762746724,135.280127521361,143.900929508731,107.621748415087,118.02913477578,171.973653883507,268.173379740719,364.104837468938,10.7101658349996,34.5383221361591,31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| ||
|short_description=p2@Spint2 | |||
}} | }} |
Latest revision as of 13:51, 26 September 2015
Short description: | p2@Spint2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spint2_5end |
Coexpression cluster: | MCL_coexpression_mm9:849 |
Association with transcript: | 3bp_to_ENSMUST00000098604, ENSMUST00000108235, ENSMUST00000108236, ENSMUST00000166639, ENSMUST00000171454, NM_001082548, NM_011464, uc009gbk.1, uc009gbl.1, uc009gbm.1_5end |
EntrezGene: | Spint2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.96e-07 | 25 |
intestinal epithelial cell | 9.29e-07 | 9 |
epithelial cell of alimentary canal | 9.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.00e-18 | 118 |
endoderm | 1.00e-18 | 118 |
presumptive endoderm | 1.00e-18 | 118 |
digestive system | 3.16e-18 | 116 |
digestive tract | 3.16e-18 | 116 |
primitive gut | 3.16e-18 | 116 |
subdivision of digestive tract | 4.65e-17 | 114 |
intestine | 1.16e-15 | 31 |
gastrointestinal system | 1.36e-14 | 47 |
mucosa | 1.79e-10 | 15 |
intestinal mucosa | 3.03e-09 | 13 |
wall of intestine | 3.03e-09 | 13 |
gastrointestinal system mucosa | 3.03e-09 | 13 |
trunk region element | 3.45e-08 | 79 |
pancreas | 3.21e-07 | 12 |
simple columnar epithelium | 4.50e-07 | 11 |
organ component layer | 6.78e-07 | 24 |
epithelium of mucosa | 9.29e-07 | 9 |
gastrointestinal system epithelium | 9.29e-07 | 9 |
intestinal epithelium | 9.29e-07 | 9 |