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FFCP PHASE1:Mm9::chr8:3587445..3587487,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:3587445..3587487,+ |short_description=p5@Camsap3 |description=CAGE_peak_5_at_Camsap3_5end |association_with_transcript=0bp_to_ENSMUST00000057028,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr8:3587445..3587487,+
|DHSsupport=NA
|short_description=p5@Camsap3
|DPIdataset=NA
|description=CAGE_peak_5_at_Camsap3_5end
|association_with_transcript=0bp_to_ENSMUST00000057028,ENSMUST00000111066,ENSMUST00000171962,NM_001163749,NM_027171,uc009krw.2,uc012fym.1_5end
|EntrezGene=69697
|EntrezGene=69697
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q80VC9,E9Q5B0
|UniProt=Q80VC9,E9Q5B0
|association_with_transcript=0bp_to_ENSMUST00000057028,ENSMUST00000111066,ENSMUST00000171962,NM_001163749,NM_027171,uc009krw.2,uc012fym.1_5end
|cluster_id=chr8:3587445..3587487,+
|description=CAGE_peak_5_at_Camsap3_5end
|id=chr8:3587445..3587487,+
|ontology_enrichment_celltype=CL:0000117!3.18e-12!23;CL:0000337!3.18e-12!23;CL:0000540!9.08e-11!33;CL:0000047!9.08e-11!33;CL:0000031!9.08e-11!33;CL:0000404!9.08e-11!33;CL:0000393!3.29e-07!39;CL:0000211!3.29e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.95e-19,23;CL:0000337,7.95e-19,23;CL:0000540,1.72e-12,33;CL:0000047,1.72e-12,33;CL:0000031,1.72e-12,33;CL:0000404,1.72e-12,33;CL:0000393,1.32e-09,39;CL:0000211,1.32e-09,39;CL:0002609,5.95e-09,6;CL:0002319,3.71e-08,43;CL:0000221,7.70e-08,44;CL:0000133,7.70e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.45e-20!71;UBERON:0003075!6.45e-20!71;UBERON:0007284!6.45e-20!71;UBERON:0003056!1.44e-17!49;UBERON:0004121!4.17e-17!102;UBERON:0000924!4.17e-17!102;UBERON:0006601!4.17e-17!102;UBERON:0002020!1.34e-16!34;UBERON:0001049!1.17e-15!52;UBERON:0005068!1.17e-15!52;UBERON:0006241!1.17e-15!52;UBERON:0007135!1.17e-15!52;UBERON:0001017!2.27e-15!73;UBERON:0005743!2.27e-15!73;UBERON:0000033!3.44e-15!63;UBERON:0000073!1.10e-14!75;UBERON:0001016!1.10e-14!75;UBERON:0003080!1.43e-13!40;UBERON:0002780!3.84e-13!39;UBERON:0001890!3.84e-13!39;UBERON:0006240!3.84e-13!39;UBERON:0002791!4.50e-13!29;UBERON:0003528!4.50e-13!29;UBERON:0001893!4.50e-13!29;UBERON:0000955!1.47e-12!50;UBERON:0006238!1.47e-12!50;UBERON:0002616!5.01e-12!49;UBERON:0000956!5.22e-10!21;UBERON:0001869!5.22e-10!21;UBERON:0000203!5.22e-10!21;UBERON:0002619!1.92e-07!17;UBERON:0000153!2.17e-07!94;UBERON:0007811!3.45e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.36e-27,34;UBERON:0003528,2.39e-21,29;UBERON:0002791,2.39e-21,29;UBERON:0001893,2.39e-21,29;UBERON:0003056,2.45e-21,49;UBERON:0002346,5.91e-21,64;UBERON:0003075,5.91e-21,64;UBERON:0007284,5.91e-21,64;UBERON:0001049,4.93e-17,52;UBERON:0005068,4.93e-17,52;UBERON:0006241,4.93e-17,52;UBERON:0007135,4.93e-17,52;UBERON:0010371,6.77e-17,73;UBERON:0000073,4.88e-16,54;UBERON:0003080,8.28e-16,40;UBERON:0004121,2.41e-15,95;UBERON:0000924,2.41e-15,95;UBERON:0006601,2.41e-15,95;UBERON:0000956,2.58e-15,21;UBERON:0001869,2.58e-15,21;UBERON:0000203,2.58e-15,21;UBERON:0002780,4.09e-15,39;UBERON:0001890,4.09e-15,39;UBERON:0006240,4.09e-15,39;UBERON:0001017,9.84e-15,73;UBERON:0001016,4.79e-14,75;UBERON:0000955,1.67e-13,47;UBERON:0006238,1.67e-13,47;UBERON:0002616,1.07e-12,46;UBERON:0010314,9.06e-12,92;UBERON:0002619,7.22e-11,17;UBERON:0001948,1.12e-07,5;UBERON:0002315,1.12e-07,5;UBERON:0000369,2.00e-07,5;UBERON:0002435,2.00e-07,5;UBERON:0000204,2.00e-07,5;UBERON:0010082,2.00e-07,5;UBERON:0002021,2.35e-07,10;UBERON:0000411,2.35e-07,10;UBERON:0001950,2.35e-07,10;UBERON:0002420,3.45e-07,8;UBERON:0007245,3.45e-07,8;UBERON:0010009,3.45e-07,8;UBERON:0010011,3.45e-07,8;UBERON:0000454,3.45e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,11.1088105647127,11.4089652631112,0,0,0,0,0,0,0,6.22137673850866,10.6654691282036,8.83364837675805,6.28432165688368,3.53389665522582,4.77714116938321,5.46319184803947,2.75765635983006,0,0.638436690425939,0.768032666281217,11.2103344570665,12.2593442427229,4.68822033501084,1.11673199600552,0,1.22238598221448,5.30331453852602,4.6982654663704,9.50637173709033,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.693941307064543,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0.127070227073065,1.3481157546434,1.37250180845588,7.53926112677186,1.73824320192276,1.79000820131231,0.62336413367868,1.29793010454206,0,0,0,0.631325567659422,1.17108398666433,1.37941262660084,1.26043490863744,2.26057226753573,1.83698547708585,1.66547836370305,1.78033276663485,1.03481348295606,0.431135985865684,0.189106080167819,0.527853372491847,0.657587197282725,0,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,1.68231958851302,13.6863134464448,0,0,0.426576501070468,0,0.257734922644187,0.605050573870028,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0.861693590931196,0.955875191810208,0,0,0.809621403349789,1.46127928955656,0.395287777946524,2.24924921495265,0.141940085208269,0.712262414669021,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0.807322133479528,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.632671987162271,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.337912250981556,1.29092962510329,0.781226309063701,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,3.43737308063638,3.95262319390481,1.37016503954128,2.2661816921691,0.675022500231806,2.2516060161211,0.453142408984205,2.07104124700728,1.24544817101012,1.99512436700516,2.21953687480374,0.486213434136588,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,2.88827288632634,2.52697211763797,1.01391719956096,0.943131706930381,1.21733959710847,2.4969809437899,1.37845125493472,0.476293691283074,1.39061191133827,1.35036454324594,0.824171801606613,1.03039244094078,0.685738504770831,1.24233064311536,1.90748951957857,1.30811774969096,1.12931256498397,1.35383372626682,1.28049581010941,1.8414879800649,1.22223702461276,2.80571135828869,1.42362021749009,1.37906275325789,0.818462086339379,2.32405261778949,2.12197272079256,5.24602213669686,1.63752125911786,1.28922632428979,0.765153328275374,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,11.1088105647127,11.4089652631112,0,0,0,0,0,0,0,6.22137673850866,10.6654691282036,8.83364837675805,6.28432165688368,3.53389665522582,4.77714116938321,5.46319184803947,2.75765635983006,0,0.638436690425939,0.768032666281217,11.2103344570665,12.2593442427229,4.68822033501084,1.11673199600552,0,1.22238598221448,5.30331453852602,4.6982654663704,9.50637173709033,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.693941307064543,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0.127070227073065,1.3481157546434,1.37250180845588,7.53926112677186,1.73824320192276,1.79000820131231,0.62336413367868,1.29793010454206,0,0,0,0.631325567659422,1.17108398666433,1.37941262660084,1.26043490863744,2.26057226753573,1.83698547708585,1.66547836370305,1.78033276663485,1.03481348295606,0.431135985865684,0.189106080167819,0.527853372491847,0.657587197282725,0,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,1.68231958851302,13.6863134464448,0,0,0.426576501070468,0,0.257734922644187,0.605050573870028,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.571242563048644,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.703270119553219,0,0,0,0.390438744296638,0.861693590931196,0.955875191810208,0,0,0.809621403349789,1.46127928955656,0.395287777946524,2.24924921495265,0.141940085208269,0.712262414669021,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0.807322133479528,0.0603129249281559,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.632671987162271,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.337912250981556,1.29092962510329,0.781226309063701,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,3.43737308063638,3.95262319390481,1.37016503954128,2.2661816921691,0.675022500231806,2.2516060161211,0.453142408984205,2.07104124700728,1.24544817101012,1.99512436700516,2.21953687480374,0.486213434136588,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,2.88827288632634,2.52697211763797,1.01391719956096,0.943131706930381,1.21733959710847,2.4969809437899,1.37845125493472,0.476293691283074,1.39061191133827,1.35036454324594,0.824171801606613,1.03039244094078,0.685738504770831,1.24233064311536,1.90748951957857,1.30811774969096,1.12931256498397,1.35383372626682,1.28049581010941,1.8414879800649,1.22223702461276,2.80571135828869,1.42362021749009,1.37906275325789,0.818462086339379,2.32405261778949,2.12197272079256,5.24602213669686,1.63752125911786,1.28922632428979,0.765153328275374,0,0
|short_description=p5@Camsap3
}}
}}

Latest revision as of 22:42, 1 October 2015

Short description:p5@Camsap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Camsap3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000057028, ENSMUST00000111066, ENSMUST00000171962, NM_001163749, NM_027171, uc009krw.2, uc012fym.1_5end
EntrezGene:Camsap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Camsap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G113.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.36e-2734
brain grey matter2.39e-2129
regional part of telencephalon2.39e-2129
telencephalon2.39e-2129
pre-chordal neural plate2.45e-2149
neurectoderm5.91e-2164
neural plate5.91e-2164
presumptive neural plate5.91e-2164
neural tube4.93e-1752
neural rod4.93e-1752
future spinal cord4.93e-1752
neural keel4.93e-1752
ecto-epithelium6.77e-1773
regional part of nervous system4.88e-1654
anterior neural tube8.28e-1640
ectoderm-derived structure2.41e-1595
ectoderm2.41e-1595
presumptive ectoderm2.41e-1595
cerebral cortex2.58e-1521
cerebral hemisphere2.58e-1521
pallium2.58e-1521
regional part of forebrain4.09e-1539
forebrain4.09e-1539
future forebrain4.09e-1539
central nervous system9.84e-1573
nervous system4.79e-1475
brain1.67e-1347
future brain1.67e-1347
regional part of brain1.07e-1246
structure with developmental contribution from neural crest9.06e-1292
regional part of cerebral cortex7.22e-1117
regional part of spinal cord1.12e-075
gray matter of spinal cord1.12e-075
corpus striatum2.00e-075
striatum2.00e-075
ventral part of telencephalon2.00e-075
future corpus striatum2.00e-075
occipital lobe2.35e-0710
visual cortex2.35e-0710
neocortex2.35e-0710
basal ganglion3.45e-078
nuclear complex of neuraxis3.45e-078
aggregate regional part of brain3.45e-078
collection of basal ganglia3.45e-078
cerebral subcortex3.45e-078
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