FFCP PHASE1:Mm9::chrX:80194200..80194254,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:80194200..80194254,+
|short_description=p1@Dmd
|description=CAGE_peak_1_at_Dmd_5end
|association_with_transcript=0bp_to_ENSMUST00000114000,ENSMUST000001272...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13405 | |EntrezGene=13405 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=P11531,Q3TWL4 | |UniProt=P11531,Q3TWL4 | ||
|association_with_transcript=0bp_to_ENSMUST00000114000,ENSMUST00000127295,NM_007868,uc009trh.2,uc009tri.2_5end | |||
|cluster_id=chrX:80194200..80194254,+ | |||
|description=CAGE_peak_1_at_Dmd_5end | |||
|id=chrX:80194200..80194254,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.13e-09!18;UBERON:0000948!1.13e-09!18;UBERON:0005498!1.13e-09!18;UBERON:0004140!1.13e-09!18;UBERON:0009881!1.13e-09!18;UBERON:0004141!1.13e-09!18;UBERON:0003084!1.13e-09!18;UBERON:0007005!1.13e-09!18;UBERON:0004139!1.13e-09!18;UBERON:0004291!1.13e-09!18;UBERON:0004535!1.02e-08!23;UBERON:0001009!1.02e-08!23;UBERON:0004872!4.15e-07!33;UBERON:0000468!4.72e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.31e-10,18;UBERON:0000948,4.31e-10,18;UBERON:0005498,4.31e-10,18;UBERON:0004140,4.31e-10,18;UBERON:0009881,4.31e-10,18;UBERON:0004141,4.31e-10,18;UBERON:0003084,4.31e-10,18;UBERON:0007005,4.31e-10,18;UBERON:0004139,4.31e-10,18;UBERON:0004291,4.31e-10,18;UBERON:0004535,2.72e-08,23;UBERON:0001009,2.72e-08,23 | |||
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| ||
|short_description=p1@Dmd | |||
}} | }} |
Latest revision as of 00:40, 2 October 2015
Short description: | p1@Dmd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dmd_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000114000, ENSMUST00000127295, NM_007868, uc009trh.2, uc009tri.2_5end |
EntrezGene: | Dmd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.31e-10 | 18 |
heart | 4.31e-10 | 18 |
primitive heart tube | 4.31e-10 | 18 |
primary heart field | 4.31e-10 | 18 |
anterior lateral plate mesoderm | 4.31e-10 | 18 |
heart tube | 4.31e-10 | 18 |
heart primordium | 4.31e-10 | 18 |
cardiac mesoderm | 4.31e-10 | 18 |
cardiogenic plate | 4.31e-10 | 18 |
heart rudiment | 4.31e-10 | 18 |
cardiovascular system | 2.72e-08 | 23 |
circulatory system | 2.72e-08 | 23 |