FFCP PHASE1:Mm9::chrX:93650868..93650938,+: Difference between revisions
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|id=chrX:93650868..93650938,+
|short_description=p1@Heph
|description=CAGE_peak_1_at_Heph_5end
|association_with_transcript=93bp_to_NM_001159628,NM_010417,uc009tuk....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15203 | |EntrezGene=15203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0Z4 | |UniProt=Q9Z0Z4 | ||
|association_with_transcript=93bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | |||
|cluster_id=chrX:93650868..93650938,+ | |||
|description=CAGE_peak_1_at_Heph_5end | |||
|id=chrX:93650868..93650938,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.27e-10!9;CL:0002251!9.27e-10!9;CL:0000239!1.58e-07!6;CL:0000677!1.58e-07!6;CL:0000212!1.58e-07!6;CL:0000584!1.58e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.35e-12,9;CL:0002251,5.35e-12,9;CL:0000239,3.67e-09,6;CL:0000677,3.67e-09,6;CL:0000584,3.67e-09,6;CL:0000075,1.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.89e-17!43;UBERON:0000344!5.53e-16!15;UBERON:0005409!6.99e-15!59;UBERON:0001242!6.19e-14!13;UBERON:0000060!6.19e-14!13;UBERON:0001262!6.19e-14!13;UBERON:0004786!6.19e-14!13;UBERON:0004923!2.71e-11!24;UBERON:0003350!9.27e-10!9;UBERON:0004808!9.27e-10!9;UBERON:0001277!9.27e-10!9;UBERON:0000485!1.88e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.55e-33,31;UBERON:0005409,2.41e-23,47;UBERON:0000344,6.32e-20,15;UBERON:0001242,2.59e-17,13;UBERON:0001262,2.59e-17,13;UBERON:0004786,2.59e-17,13;UBERON:0004923,3.58e-12,24;UBERON:0003350,5.35e-12,9;UBERON:0004808,5.35e-12,9;UBERON:0001277,5.35e-12,9;UBERON:0000485,2.27e-09,11 | |||
|phase1_expression=0,262.08053113716,212.939644034303,195.391880504212,179.821567050739,48.3492303106243,53.2636820557799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,127.353968543552,158.751222498482,183.754228516806,168.858702494357,151.47627657818,160.37976602118,151.470107985718,137.9163776276,0,0,0,6.06588401477677,8.97667084935859,6.94175811292055,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,25.6913729367885,0,0,0,0,0,0,0,0.753999547978053,8.65182387070309,0.144599356919912,0,0,0,0,37.2783522436244,0,0,84.5562852740437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,264.665445170022,71.930554132484,0,0,5.41243337552792,26.4205417256579,32.9119504890408,59.1601697210059,106.294509785971,121.218430676872,91.4860160032981,88.7345865303533,86.7590187680085,106.959509629852,95.3168799947402,114.107949574752,0,0,0,0.203651327845314,0.581857461502877,2.03393877681924,1.64414996523069,1.32849133181642,2.35498091762062,2.71473760627961,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,15.247269296925,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0.161464426695906,0.180938774784468,0,0.492422699235184,120.090104691498,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80813886136683,0.627264888043406,5.45906409365444,0.539457385539283,0.41326727862668,0,81.5278182005377,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,2.44471400581777,2.47242068686673,1.92551525755089,1.01078884705519,1.52087579934144,2.07488975524684,3.83930180626518,3.00918216302886,2.35485422718014,1.42888107384922,2.89710814862139,3.47236596834669,1.64834360321323,1.47198920134397,2.74295401908332,1.95223386775271,2.38436189947321,1.74415699958794,2.63506265162926,3.29996970777538,2.19513567447327,2.89376682581627,3.25929873230068,1.12228454331548,3.2031454893527,1.77308068276014,2.04615521584845,3.56354734727722,2.89359916471712,0,2.57324769289949,6.23126056740065,0,0,0 | |phase1_expression=0,262.08053113716,212.939644034303,195.391880504212,179.821567050739,48.3492303106243,53.2636820557799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,127.353968543552,158.751222498482,183.754228516806,168.858702494357,151.47627657818,160.37976602118,151.470107985718,137.9163776276,0,0,0,6.06588401477677,8.97667084935859,6.94175811292055,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,25.6913729367885,0,0,0,0,0,0,0,0.753999547978053,8.65182387070309,0.144599356919912,0,0,0,0,37.2783522436244,0,0,84.5562852740437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,264.665445170022,71.930554132484,0,0,5.41243337552792,26.4205417256579,32.9119504890408,59.1601697210059,106.294509785971,121.218430676872,91.4860160032981,88.7345865303533,86.7590187680085,106.959509629852,95.3168799947402,114.107949574752,0,0,0,0.203651327845314,0.581857461502877,2.03393877681924,1.64414996523069,1.32849133181642,2.35498091762062,2.71473760627961,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,15.247269296925,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0,0,0.161464426695906,0.180938774784468,0,0.492422699235184,120.090104691498,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80813886136683,0.627264888043406,5.45906409365444,0.539457385539283,0.41326727862668,0,81.5278182005377,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,2.44471400581777,2.47242068686673,1.92551525755089,1.01078884705519,1.52087579934144,2.07488975524684,3.83930180626518,3.00918216302886,2.35485422718014,1.42888107384922,2.89710814862139,3.47236596834669,1.64834360321323,1.47198920134397,2.74295401908332,1.95223386775271,2.38436189947321,1.74415699958794,2.63506265162926,3.29996970777538,2.19513567447327,2.89376682581627,3.25929873230068,1.12228454331548,3.2031454893527,1.77308068276014,2.04615521584845,3.56354734727722,2.89359916471712,0,2.57324769289949,6.23126056740065,0,0,0 | ||
|short_description=p1@Heph | |||
}} | }} |
Latest revision as of 00:52, 2 October 2015
Short description: | p1@Heph |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Heph_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 93bp_to_NM_001159628, NM_010417, uc009tuk.2, uc009tul.2_5end |
EntrezGene: | Heph |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.35e-12 | 9 |
epithelial cell of alimentary canal | 5.35e-12 | 9 |
brush border epithelial cell | 3.67e-09 | 6 |
gut absorptive cell | 3.67e-09 | 6 |
enterocyte | 3.67e-09 | 6 |
columnar/cuboidal epithelial cell | 1.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.55e-33 | 31 |
gastrointestinal system | 2.41e-23 | 47 |
mucosa | 6.32e-20 | 15 |
intestinal mucosa | 2.59e-17 | 13 |
wall of intestine | 2.59e-17 | 13 |
gastrointestinal system mucosa | 2.59e-17 | 13 |
organ component layer | 3.58e-12 | 24 |
epithelium of mucosa | 5.35e-12 | 9 |
gastrointestinal system epithelium | 5.35e-12 | 9 |
intestinal epithelium | 5.35e-12 | 9 |
simple columnar epithelium | 2.27e-09 | 11 |