Swissregulon:ONECUT1,2.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:9480:ONECUT2:one cut homeobox 2::NM_004852:OC-2;1.000:3175:ONECUT1:one cut homeobox 1::NM_004498:HNF-6 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0007275!multicellular organismal development!0.00246638086545402!4661;84432;4281;23040;1756;8074;4211;653;152330;4808;2118;4335;3218;9734;4488;7026;2066$GO:0006355!regulation of transcription, DNA-dependent!0.00246638086545402!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0006351!transcription, DNA-dependent!0.00246638086545402!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0032774!RNA biosynthetic process!0.00246638086545402!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0019222!regulation of metabolic process!0.00246638086545402!389421;390927;4661;2104;5275;23040;3170;4211;2918;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;6711;57822;7026$GO:0019219!regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.00246638086545402!389421;390927;4661;2104;23040;3170;4211;2918;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0032502!developmental process!0.00363131152299409!79767;4661;84432;166336;4281;6750;23040;4211;1756;8074;653;152330;4808;2118;4335;3218;9844;9734;4488;7026;2066$GO:0032501!multicellular organismal process!0.00363131152299409!4661;84432;4281;6750;23040;1142;4211;8074;1756;2918;653;152330;2169;4808;570;2118;3172;4335;3218;9734;4488;7026;2066$GO:0045449!regulation of transcription!0.00451248289081376!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0043229!intracellular organelle!0.00451248289081376!79767;390927;7366;53405;55297;5874;122786;166336;3170;121506;84978;9913;26040;54963;570;4335;3172;80017;2118;84450;7365;79070;3218;9734;9844;9501;4488;25984;8609;3159;57822;389421;4661;84524;2104;132204;54518;4281;23040;1756;4211;7772;29119;4808;10766;22882;6711;7026$GO:0043226!organelle!0.00451248289081376!79767;390927;7366;53405;55297;5874;122786;166336;3170;121506;84978;9913;26040;54963;570;4335;3172;80017;2118;84450;7365;79070;3218;9734;9844;9501;4488;25984;8609;3159;57822;389421;4661;84524;2104;132204;54518;4281;23040;1756;4211;7772;29119;4808;10766;22882;6711;7026$GO:0031323!regulation of cellular metabolic process!0.00451248289081376!389421;390927;4661;2104;23040;3170;4211;2918;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0003700!transcription factor activity!0.00451248289081376!4661;2104;4335;3172;2118;23040;3218;3170;4488;4211;3159;8609;22882;7026$GO:0048869!cellular developmental process!0.00631654108838598!79767;4661;4335;2118;6750;23040;9844;9734;8074;653;152330;7026;4808$GO:0030154!cell differentiation!0.00631654108838598!79767;4661;4335;2118;6750;23040;9844;9734;8074;653;152330;7026;4808$GO:0006350!transcription!0.00631654108838598!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0005886!plasma membrane!0.00638180073290143!344758;56110;132204;166336;54518;1142;2867;135228;1756;2918;1007;152330;130132;29119;1014;343;753;9844;6326;1015;2060;6711;2066$GO:0010468!regulation of gene expression!0.00660726598704993!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0043565!sequence-specific DNA binding!0.00695606641866778!2104;3172;2118;3218;3170;4211;4488;3159;22882;7026$GO:0044464!cell part!0.0102828870891154!23554;79767;390927;7366;53405;5874;344758;5275;166336;347741;2918;9913;22950;54963;115111;613212;570;4335;2118;80017;343;9734;9501;6326;25984;6819;57822;389421;2104;1142;10175;1756;152330;7772;10766;22882;6711;55297;122786;3170;2867;121506;1007;84978;130132;26040;53919;1014;3172;84450;7365;753;3218;79070;9844;1015;2060;4488;3159;8609;4661;84524;56110;132204;54518;4281;23040;135228;10956;4211;55334;2169;23007;29119;4808;7026;2066$GO:0003677!DNA binding!0.012617386743185!389421;390927;4661;2104;23040;3170;4211;7772;4808;26040;2118;3172;4335;84450;3218;4488;8609;3159;22882;57822;7026$GO:0044424!intracellular part!0.012617386743185!79767;390927;7366;53405;55297;5874;122786;5275;166336;3170;121506;84978;9913;26040;54963;570;4335;3172;80017;2118;84450;7365;79070;3218;9734;9844;9501;4488;25984;2060;8609;3159;6819;57822;389421;4661;84524;2104;132204;54518;4281;23040;1756;4211;23007;2169;7772;29119;4808;10766;22882;6711;7026$GO:0007389!pattern specification process!0.0136987256466678!653;7026;4281;3218$GO:0016337!cell-cell adhesion!0.0139121163505917!1015;56110;1007;152330;1014;29119$GO:0050789!regulation of biological process!0.0139121163505917!389421;390927;4661;84432;2104;5275;6750;23040;3170;4211;8074;2918;152330;9913;7772;4808;2118;3172;4335;84450;10766;3218;9734;4488;3159;8609;22882;6711;7026;57822$GO:0048856!anatomical structure development!0.0190017036517323!4661;84432;166336;4281;2118;23040;9734;1756;8074;4488;653;152330;7026;4808$GO:0050794!regulation of cellular process!0.0191269286960639!389421;390927;4661;84432;2104;6750;23040;3170;4211;2918;152330;9913;7772;4808;2118;3172;4335;84450;10766;3218;9734;4488;3159;8609;22882;6711;7026;57822$GO:0016070!RNA metabolic process!0.0205236165199764!389421;390927;4661;2104;23040;3170;4211;9913;7772;4808;2118;3172;4335;84450;3218;9734;4488;3159;8609;22882;57822;7026$GO:0043231!intracellular membrane-bound organelle!0.0383117126529071!390927;7366;53405;55297;5874;166336;3170;121506;9913;26040;54963;570;4335;80017;2118;3172;84450;7365;3218;79070;9734;4488;3159;8609;57822;389421;4661;84524;2104;132204;23040;4211;7772;4808;10766;22882;7026;6711$GO:0043227!membrane-bound organelle!0.0383117126529071!390927;7366;53405;55297;5874;166336;3170;121506;9913;26040;54963;570;4335;80017;2118;3172;84450;7365;3218;79070;9734;4488;3159;8609;57822;389421;4661;84524;2104;132204;23040;4211;7772;4808;10766;22882;7026;6711$GO:0016563!transcription activator activity!0.0428834360529208!8609;3159;2104;4335;2118$GO:0048731!system development!0.0428834360529208!4661;84432;2118;23040;9734;1756;8074;4488;653;152330;7026;4808$GO:0005856!cytoskeleton!0.0483917415083964!79767;53405;122786;54518;4281;9844;1756;25984;84978;6711;29119 | |||
|gostat_on_mara_mm9=GO:0032502!developmental process!0.00109445080941185!76260;22240;16001;243548;17933;15376;80751;14048;69635;110648;11517;21834;20203;15417;18612;236266;140580;11735;93691;241568;13869$GO:0048856!anatomical structure development!0.00109445080941185!76260;22240;16001;243548;17933;15376;14048;110648;21834;15417;18612;236266;11735;93691;241568;13869$GO:0007399!nervous system development!0.00109445080941185!22240;16001;18612;17933;11735;14048;93691;110648;241568;13869$GO:0032990!cell part morphogenesis!0.00109445080941185!76260;11735;93691;110648;241568;18612;236266$GO:0048858!cell projection morphogenesis!0.00109445080941185!76260;11735;93691;110648;241568;18612;236266$GO:0030030!cell projection organization and biogenesis!0.00109445080941185!76260;11735;93691;110648;241568;18612;236266$GO:0009653!anatomical structure morphogenesis!0.00109445080941185!76260;16001;15417;243548;18612;15376;236266;11735;14048;93691;110648;241568;21834$GO:0000904!cellular morphogenesis during differentiation!0.00109445080941185!11735;93691;110648;241568;18612;236266$GO:0032989!cellular structure morphogenesis!0.00291158217892291!76260;11735;93691;110648;243548;241568;18612;236266$GO:0000902!cell morphogenesis!0.00291158217892291!76260;11735;93691;110648;243548;241568;18612;236266$GO:0048869!cellular developmental process!0.00291158217892291!20203;18612;17933;15376;236266;80751;140580;11735;69635;14048;93691;110648;241568;11517;13869$GO:0030154!cell differentiation!0.00291158217892291!20203;18612;17933;15376;236266;80751;140580;11735;69635;14048;93691;110648;241568;11517;13869$GO:0048468!cell development!0.00291158217892291!20203;18612;15376;236266;80751;140580;11735;69635;14048;93691;110648;241568$GO:0007411!axon guidance!0.0030742394798435!11735;93691;110648;18612$GO:0007409!axonogenesis!0.0030742394798435!11735;93691;110648;241568;18612$GO:0048667!neuron morphogenesis during differentiation!0.00354464491004629!11735;93691;110648;241568;18612$GO:0048812!neurite morphogenesis!0.00354464491004629!11735;93691;110648;241568;18612$GO:0030182!neuron differentiation!0.00457731926924956!11735;14048;93691;110648;241568;18612$GO:0048731!system development!0.00561827048055303!22240;16001;15417;18612;17933;15376;236266;11735;14048;93691;110648;241568;13869;21834$GO:0031175!neurite development!0.00694469878211336!11735;93691;110648;241568;18612$GO:0048699!generation of neurons!0.00783980036264756!11735;14048;93691;110648;241568;18612$GO:0048666!neuron development!0.0104072568964156!11735;93691;110648;241568;18612$GO:0022008!neurogenesis!0.0104072568964156!11735;14048;93691;110648;241568;18612$GO:0007275!multicellular organismal development!0.0106827522501958!22240;16001;15417;18612;17933;15376;236266;11735;14048;93691;110648;241568;11517;13869;21834$GO:0046914!transition metal ion binding!0.0275488656610158!380669;13079;57432;93721;20203;243548;56720;17933;80751;15233;226143;93691;110648;224170;21834$GO:0009072!aromatic amino acid family metabolic process!0.0455417042279476!15233;56720$GO:0006928!cell motility!0.0455417042279476!140580;11735;93691;110648;18612$GO:0051674!localization of cell!0.0455417042279476!140580;11735;93691;110648;18612$GO:0045664!regulation of neuron differentiation!0.0455417042279476!14048;110648$GO:0004184!lysine carboxypeptidase activity!0.0455417042279476!93721$GO:0004509!steroid 21-monooxygenase activity!0.0455417042279476!13079$GO:0008903!hydroxypyruvate isomerase activity!0.0455417042279476!68180$GO:0004411!homogentisate 1,2-dioxygenase activity!0.0455417042279476!15233$GO:0043169!cation binding!0.0489638517823615!380669;57432;93721;243548;93700;17933;80751;15233;226143;110648;21834;13079;20203;12556;56720;13858;93691;224170$GO:0009887!organ morphogenesis!0.0495009241880065!16001;14048;15417;18612;21834;236266$GO:0046872!metal ion binding!0.0496997651555492!380669;57432;93721;243548;93700;17933;80751;15233;14048;226143;110648;21834;13079;20203;12556;56720;13858;93691;224170 | |||
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|motif_activities_mm9=0.759563441598,-0.0757691492631,-0.329674643573,-0.217713455377,0.00920758182076,0.978278231305,0.967379755186,-1.60550565177,-1.63670694775,-1.84784459381,-0.956118595878,-0.735371824455,-1.66341077399,-1.38981772075,-1.08525874774,-1.47462682362,-1.15995664666,-1.54179011411,-1.62993776421,-1.58908777054,-1.03974409005,-0.934914770349,-0.896899999853,-0.0990938427281,-0.228060554246,0.126779885737,0.359669433241,0.385794315256,0.0375890667722,-0.0224406801048,0.118386199035,-0.587873773782,-0.388014938027,0.523785266672,0.535809913461,0.318396758524,0.489612011428,-1.57248856945,-1.26761196113,-1.34260634321,-2.02895778658,-1.85970940705,-1.3814919186,-0.0452320038978,0.2006011242,0.187271904377,-0.209875899255,0.255360434646,-0.14736670675,-0.134524444955,0.268406685431,-0.191892727566,-1.47322431417,-1.55669329948,-1.38068233488,-0.0344339915805,-0.591084908886,-0.526722243621,1.64371216785,1.37777355828,1.42460338977,0.0155042103939,-0.113588555894,-0.714122129982,-1.28961208926,-0.704062214762,-0.503696199237,-0.504516300559,1.72863143422,1.21574453412,1.46474215295,1.06248698511,0.828042990496,1.31416595564,1.34346679188,1.37570069518,0.773753582709,0.956936501796,0.87674883031,1.47915384739,1.61720010531,1.5563945614,0.817096519781,0.983622339099,0.885854877612,1.71050248438,1.65331024264,2.06366890665,0.465986542814,1.11193697478,0.00593715672726,1.67792396734,1.41499727923,2.61136324052,2.80603693151,2.40435562596,0.24796599635,0.44241081622,0.289933675291,0.447885950941,1.20574768236,-0.356856087586,0.34160860859,0.864363294137,0.716133841116,0.795359852889,1.1786273789,0.890146825116,-1.77507747268,0.114215666132,0.112480092006,0.383197165328,0.46817725679,0.554516702519,0.419199409508,0.575863232416,-0.770828497778,-1.75477958978,-1.83930767736,-1.93549463189,-1.91438654593,-2.25823762511,-0.600152880297,1.04787345605,1.22579070529,-0.655264265701,-0.72415956678,-0.610280671161,-0.865925878527,0.552139379566,0.26188357554,1.60888630616,0.628488288809,0.625809386567,0.303495766411,0.705519100936,-0.450042181537,-1.56351456143,-0.613628236141,-1.14110913498,0.27114574132,0.305170462468,0.412126245125,1.15235746857,0.407802893675,0.348737455357,0.0956759248586,-0.979325351502,0.437115489373,0.304302706455,-0.186214234469,-0.473314174927,-0.3868307935,-1.27452443731,-0.969983716461,0.107841542548,-0.961951011545,-1.04638316417,-1.04457505789,-0.442557175954,-0.157993611943,-0.38460655808,-1.1553925546,-0.637999812707,-0.789689388958,-1.07354575666,-1.21625927064,-1.29186570773,-1.13161034734,-1.75722383808,-1.84702020812,-2.23422563678,-2.16428544693,-2.10687248226,0.685656876324,1.49079325641,-0.12137426869,-0.264331281841,0.581096885246,0.746731908888,0.433921651527,0.224051527664,-0.0752371587519,0.408357843039,-0.767224766264,-0.317093493766,0.133680161248,-0.284101262414,-0.535307336572,-0.410027934246,-0.484373142479,-0.733534910797,0.410928894014,1.16539182109,1.22497405199,0.879403780749,1.12715816323,1.15905928105,0.904235340703,1.14718441164,1.06055308304,0.716005116698,2.22238501355,0.635228245869,0.513416048708,0.539686928293,0.53023818475,0.765495822852,0.812296708908,1.05447026481,0.599527462571,1.29399883972,2.38543937262,1.55335906683,1.73633611002,1.90722337009,1.62814873781,1.99939977893,-1.51596331362,-0.151558752777,0.273606177721,0.295003548499,0.198779829135,-0.234509368474,-0.0924622875712,-0.530456290825,-0.682312549343,-0.753021805641,-0.438507896254,-1.29541731924,-1.35741771162,-1.28691735814,-0.483607990318,-0.585083795186,-1.25093759951,-1.22992445434,0.444539755419,0.809558770619,0.240220819365,-1.58140674465,1.96319975582,1.6516894892,2.08489986831,1.21623072452,1.49632849425,1.46698165473,1.58468111132,1.88192375228,1.67688275254,-0.33631780675,-1.07787464199,-0.635707429628,-0.527295959389,-1.30554215626,0.198392998668,1.22069928098,1.10303690486,0.88349408688,0.24068385619,0.449687581588,0.0681426277393,1.10500707811,0.683308358136,0.372458918293,0.166038165693,0.167018160452,0.593245215236,1.06572369901,0.573977258566,0.328865786567,0.430974822178,0.36457769172,0.408370991789,-0.212079427664,-0.664680606892,-0.821109537267,0.443374176644,-0.3408943744,-1.2768572306,-0.726019364749,-0.696693048936,-0.401769902305,-0.675937189818,0.650138715422,-1.58420446572,-0.541813929298,-0.786495969514,-1.2399758463,-1.31771305734,-1.29645241817,-0.3215560328,-0.593107625931,-0.439984334467,-0.684993354723,0.63900304404,0.752514505874,0.719484656992,0.292626786995,0.0479877147141,0.373755356174,0.616732753301,-0.869506625583,-0.531479442809,-1.1489001136,-1.42603221783,-0.359769305498,-0.599091125007,-0.462884422014,-0.809409258442,-0.536331109318,-0.520324267396,0.546367015024,-0.283392081765,-0.81292120339,-1.44868672073,-1.21502302607,-0.89366077244,-0.892984623983,-1.04023754332,-1.0673093755,-1.24328117718,-1.34283382911,-1.20542556997,-1.16111095033,-1.10841902839,-1.1545719728,-1.19017761704,-1.07963689224,-1.1804785312,-1.24855398697,0.592037543885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| |||
|name=ONECUT1,2.p1 | |name=ONECUT1,2.p1 | ||
|weight_matrix=NA:ONECUT1,2.p1;PO:A:C:G:T;01:168.809421:81.029231:28.157964:108.435421;02:190.633616:32.969003:58.706582:104.122836;03:276.050847:13.554011:44.317616:52.509563;04:349.360535:5.471291:16.492657:15.107554;05:283.505678:7.318416:83.455931:12.152012;06:17.578192:24.876475:18.73135:325.24602;07:51.822952:272.52966:25.664947:36.414478;08:350.05245:23.990858:6.874223:5.514506;09:347.066179:9.919585:15.459154:13.987119;10:25.723229:30.830333:9.566046:320.312429;11:215.192398:45.479176:75.360744:50.399719;12:220.065384:29.432324:46.640903:90.293426 | |weight_matrix=NA:ONECUT1,2.p1;PO:A:C:G:T;01:168.809421:81.029231:28.157964:108.435421;02:190.633616:32.969003:58.706582:104.122836;03:276.050847:13.554011:44.317616:52.509563;04:349.360535:5.471291:16.492657:15.107554;05:283.505678:7.318416:83.455931:12.152012;06:17.578192:24.876475:18.73135:325.24602;07:51.822952:272.52966:25.664947:36.414478;08:350.05245:23.990858:6.874223:5.514506;09:347.066179:9.919585:15.459154:13.987119;10:25.723229:30.830333:9.566046:320.312429;11:215.192398:45.479176:75.360744:50.399719;12:220.065384:29.432324:46.640903:90.293426 | ||
}} | }} |
Latest revision as of 09:57, 17 April 2012
recognized by
- ONECUT2 ( EntrezGene:9480 )
- ONECUT1 ( EntrezGene:3175 )
(data source: http://www.swissregulon.unibas.ch/)
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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