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{{UBERON
{{UBERON
|id=UBERON:0003504
|alt_id=
|name=respiratory system blood vessel
|namespace=
|def="A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|xref=MA:0001799
|is_a=UBERON:0001981;;UBERON:0004807
|synonym="apparatus respiratorius blood vessel" EXACT [OBOL:automatic];;"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic];;"blood vessel of respiratory system" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003504
|is_a=UBERON:0001981
|is_obsolete=
|located_in=
|located_in=
|name=respiratory system blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001004
|part_of=UBERON:0001004
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="apparatus respiratorius blood vessel" EXACT [OBOL:automatic];;"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic];;"blood vessel of respiratory system" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0001799
}}
}}

Latest revision as of 17:40, 12 September 2014

Name:respiratory system blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001799
Synonyms: "apparatus respiratorius blood vessel" EXACT [OBOL:automatic]
"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic]
"blood vessel of respiratory system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0001004(respiratory system)



Children

is a:UBERON:0003643 (respiratory system arterial blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003504 (respiratory system blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data