UBERON:0004122: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0004122
|name=genitourinary system
|namespace=
|def=
|xref=AAO:0000624;;BILA:0000122;;BTO:0003091;;EFO:0003864;;EHDAA:1013;;EMAPA:16367;;EV:0100094;;G...") |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003064 | |develops_from=UBERON:0003064 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004122 | |||
|is_a=UBERON:0000467 ;;UBERON:0004120 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=genitourinary system | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.[AAO]" xsd:string;;UBPROP:0000002 "relationship type change: differentiates_from intermediate mesoderm (AAO:0010575) CHANGED TO: develops_from intermediate mesoderm (UBERON:0003064)[AAO]" xsd:string | |||
|subset= | |||
|synonym="genitourinary tract" RELATED [];;"GU tract" RELATED [];;"urogenital system" EXACT [];;"urogenital tract" RELATED [BTO:0003091];;"Urogenitalsystem" RELATED [BTO:0003091] | |||
|union_of= | |||
|xref=AAO:0000624;;BILA:0000122;;BTO:0003091;;EFO:0003864;;EHDAA:1013;;EMAPA:16367;;EV:0100094;;GAID:362;;galen:GenitoUrinarySystem;;MESH:A.05;;ncithesaurus:Genitourinary_System;;OpenCyc:Mx4rQRpVMgAKEdyHxgDggVfs8g;;SCTID:278861008;;VHOG:0000286;;XAO:0000140 | |||
}} | }} | ||
Latest revision as of 17:43, 12 September 2014
| Name: | genitourinary system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"genitourinary tract" RELATED [] "GU tract" RELATED [] "urogenital system" EXACT [] "urogenital tract" RELATED [BTO:0003091] "Urogenitalsystem" RELATED [BTO:0003091] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0003064(intermediate mesoderm) |
Children
| part of: | UBERON:0000162 (cloaca),UBERON:0005294 (genital ridge) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004122 (genitourinary system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.45e-30 | FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_9b30401d1cd989136c28849a6c93f47c | p@chr10:91567053..91567066, + |
| 2.45e-30 | FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_9b30401d1cd989136c28849a6c93f47c | p@chr10:91567053..91567066, + |
| 2.45e-30 | FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_9b30401d1cd989136c28849a6c93f47c | p@chr10:91567075..91567084, + |
| 2.45e-30 | FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_9b30401d1cd989136c28849a6c93f47c | p@chr10:91567075..91567084, + |
| 3.0e-28 | FFCP PHASE1:Mm9::chr7:135148666..135148682,-#_6a5c5d5ab3ce189d95688753a00e3483 | p1@ENSMUST00000126205 |
| 3.0e-28 | FFCP PHASE2:Mm9::chr7:135148666..135148682,-#_6a5c5d5ab3ce189d95688753a00e3483 | p1@ENSMUST00000126205 |
| 1.82e-27 | FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_d7b13bda033d06844b8e039d2280c4c2 | p7@C7orf63 |
| 1.82e-27 | FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_d7b13bda033d06844b8e039d2280c4c2 | p7@C7orf63 |
| 7.67e-27 | FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_c2fabb3dc45d2cc2cee48207436882ae | p@chr1:132699659..132699668, + |
| 7.67e-27 | FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_c2fabb3dc45d2cc2cee48207436882ae | p@chr1:132699659..132699668, + |
| 1.15e-26 | FFCP PHASE1:Hg19::chr14:33088589..33088594,+#_34d68d2bde1ea1b4d7fc98247ea96527 | p@chr14:33088589..33088594, + |
| 1.15e-26 | FFCP PHASE2:Hg19::chr14:33088589..33088594,+#_34d68d2bde1ea1b4d7fc98247ea96527 | p@chr14:33088589..33088594, + |
| 1.93e-24 | FFCP PHASE1:Hg19::chr10:97262585..97262611,-#_cb3407884a55077739581ab0016af10e | p@chr10:97262585..97262611, - |
| 1.93e-24 | FFCP PHASE2:Hg19::chr10:97262585..97262611,-#_cb3407884a55077739581ab0016af10e | p@chr10:97262585..97262611, - |
| 2.98e-24 | FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_b3d15bb34f90207850127ccd2986b878 | p@chr9:96425825..96425834, - |
| 2.98e-24 | FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_b3d15bb34f90207850127ccd2986b878 | p@chr9:96425825..96425834, - |
| 2.98e-24 | FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_b3d15bb34f90207850127ccd2986b878 | p@chr9:96425983..96425992, + |
| 2.98e-24 | FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_b3d15bb34f90207850127ccd2986b878 | p@chr9:96425983..96425992, + |
| 2.98e-24 | FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_b3d15bb34f90207850127ccd2986b878 | p@chr7:114836650..114836663, + |
| 2.98e-24 | FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_b3d15bb34f90207850127ccd2986b878 | p@chr15:58237385..58237400, + |
| 2.98e-24 | FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_b3d15bb34f90207850127ccd2986b878 | p@chr7:114836650..114836663, + |
| 2.98e-24 | FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_b3d15bb34f90207850127ccd2986b878 | p@chr15:58237385..58237400, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_f55f7345503823b90ee6bccf8e901b95 | p3@C1rb |
| 3.9e-24 | FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_f55f7345503823b90ee6bccf8e901b95 | p4@C1rb |
| 3.9e-24 | FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:120464717..120464741, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28922549..28922561, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_f55f7345503823b90ee6bccf8e901b95 | p3@C1rb |
| 3.9e-24 | FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr19:11353922..11353934, - |
| 3.9e-24 | FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr5:120136866..120136874, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:120464717..120464741, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:120464756..120464765, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_f55f7345503823b90ee6bccf8e901b95 | p4@C1rb |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:55028037..55028075, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr19:11353922..11353934, - |
| 3.9e-24 | FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:120464756..120464765, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_f55f7345503823b90ee6bccf8e901b95 | p2@9530053A07Rik |
| 3.9e-24 | FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_f55f7345503823b90ee6bccf8e901b95 | p4@Fam115e |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_f55f7345503823b90ee6bccf8e901b95 | p2@9530053A07Rik |
| 3.9e-24 | FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr5:120136866..120136874, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_f55f7345503823b90ee6bccf8e901b95 | p3@9530053A07Rik |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:55028037..55028075, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:36337031..36337049, - |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28900349..28900364, - |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28922549..28922561, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_f55f7345503823b90ee6bccf8e901b95 | p4@Fam115e |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_f55f7345503823b90ee6bccf8e901b95 | p3@9530053A07Rik |
| 3.9e-24 | FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28924794..28924814, + |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28900349..28900364, - |
| 3.9e-24 | FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_f55f7345503823b90ee6bccf8e901b95 | p@chr7:28924794..28924814, + |
| 3.9e-24 | FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_f55f7345503823b90ee6bccf8e901b95 | p@chr9:36337031..36337049, - |
| 5.1e-24 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e94eef5dad5c6ff67fccefe8c7e61ca3 | p4@Spink12 |
| 5.1e-24 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e94eef5dad5c6ff67fccefe8c7e61ca3 | p4@Spink12 |
| 6.42e-24 | FFCP PHASE2:Mm9::chr5:88020592..88020603,-#_392ce144d27962228ee24a60e6fc4602 | p2@Sult1e1 |
| 6.42e-24 | FFCP PHASE1:Mm9::chr5:88020592..88020603,-#_392ce144d27962228ee24a60e6fc4602 | p2@Sult1e1 |
| 1.68e-20 | FFCP PHASE1:Hg19::chr10:97262800..97262820,-#_0c95023fe4b0dccf4f77c1a03a26da55 | p@chr10:97262800..97262820, - |
| 1.68e-20 | FFCP PHASE2:Hg19::chr10:97262800..97262820,-#_0c95023fe4b0dccf4f77c1a03a26da55 | p@chr10:97262800..97262820, - |
| 2.05e-20 | FFCP PHASE1:Hg19::chr17:3824984..3824995,-#_78a1a96e14b2c1c07e3e54a4dae11411 | p@chr17:3824984..3824995, - |
| 2.05e-20 | FFCP PHASE2:Hg19::chr17:3824984..3824995,-#_78a1a96e14b2c1c07e3e54a4dae11411 | p@chr17:3824984..3824995, - |
| 4.75e-20 | FFCP PHASE1:Mm9::chr19:21245439..21245446,-#_ebc385447bf42dea56fc34a0de1628f8 | p3@uc008gyt.1 |
| 4.75e-20 | FFCP PHASE2:Mm9::chr11:5749319..5749329,+#_ebc385447bf42dea56fc34a0de1628f8 | p@chr11:5749319..5749329, + |
| 4.75e-20 | FFCP PHASE2:Mm9::chr19:21245439..21245446,-#_ebc385447bf42dea56fc34a0de1628f8 | p3@uc008gyt.1 |
| 4.75e-20 | FFCP PHASE1:Mm9::chr11:5749319..5749329,+#_ebc385447bf42dea56fc34a0de1628f8 | p@chr11:5749319..5749329, + |
| 1.79e-19 | FFCP PHASE2:Hg19::chr7:136759451..136759469,+#_f1251f14124d258d5d1f9b3050957c40 | p@chr7:136759451..136759469, + |
| 1.79e-19 | FFCP PHASE1:Hg19::chr7:136759451..136759469,+#_f1251f14124d258d5d1f9b3050957c40 | p@chr7:136759451..136759469, + |
| 8.95e-19 | FFCP PHASE1:Hg19::chr7:27239703..27239715,-#_3d9512e692611a9b27293c115970c31f | p1@HOXA13 |
| 8.95e-19 | FFCP PHASE2:Hg19::chr7:27239703..27239715,-#_3d9512e692611a9b27293c115970c31f | p1@HOXA13 |
| 1.04e-18 | FFCP PHASE2:Hg19::chr8:30272825..30272837,+#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr8:30272825..30272837, + |
| 1.04e-18 | FFCP PHASE1:Hg19::chr4:120437504..120437512,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr4:120437504..120437512, - |
| 1.04e-18 | FFCP PHASE2:Hg19::chr2:20402266..20402279,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr2:20402266..20402279, - |
| 1.04e-18 | FFCP PHASE2:Hg19::chr4:120437504..120437512,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr4:120437504..120437512, - |
| 1.04e-18 | FFCP PHASE1:Hg19::chr8:30272825..30272837,+#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr8:30272825..30272837, + |
| 1.04e-18 | FFCP PHASE2:Hg19::chr7:75958094..75958103,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr7:75958094..75958103, - |
| 1.04e-18 | FFCP PHASE1:Hg19::chr8:95683679..95683696,+#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr8:95683679..95683696, + |
| 1.04e-18 | FFCP PHASE2:Hg19::chr8:95683679..95683696,+#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr8:95683679..95683696, + |
| 1.04e-18 | FFCP PHASE1:Hg19::chr7:75958094..75958103,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr7:75958094..75958103, - |
| 1.04e-18 | FFCP PHASE1:Hg19::chr2:20402266..20402279,-#_1dc616dbde9424fd3ccc26c34bac49f2 | p@chr2:20402266..20402279, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr15:101522998..101523006,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr15:101522998..101523006, - |
| 1.16e-18 | FFCP PHASE2:Mm9::chr15:101506963..101506974,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr15:101506963..101506974, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr11:57320631..57320636,-#_d5b33c7495c8d99efb22eff172caa39a | p5@Fam114a2 |
| 1.16e-18 | FFCP PHASE2:Mm9::chr1:72981474..72981498,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr1:72981474..72981498, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr4:152405146..152405150,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr4:152405146..152405150, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr11:100107430..100107473,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr11:100107430..100107473, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr18:64859665..64859669,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr18:64859665..64859669, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr9:74005044..74005065,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr9:74005044..74005065, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr12:89223836..89223840,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr12:89223836..89223840, + |
| 1.16e-18 | FFCP PHASE1:Mm9::chr16:20188882..20188884,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr16:20188882..20188884, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr19:11353179..11353189,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr19:11353179..11353189, - |
| 1.16e-18 | FFCP PHASE2:Mm9::chr6:42539787..42539797,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr6:42539787..42539797, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr6:42543996..42544003,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr6:42543996..42544003, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr11:100107430..100107473,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr11:100107430..100107473, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr1:72981474..72981498,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr1:72981474..72981498, + |
| 1.16e-18 | FFCP PHASE1:Mm9::chr12:80992302..80992309,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr12:80992302..80992309, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr16:20186645..20186650,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr16:20186645..20186650, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr5:86802562..86802592,-#_d5b33c7495c8d99efb22eff172caa39a | p6@Tmprss11d |
| 1.16e-18 | FFCP PHASE2:Mm9::chr15:101506516..101506534,-#_d5b33c7495c8d99efb22eff172caa39a | p@chr15:101506516..101506534, - |
| 1.16e-18 | FFCP PHASE2:Mm9::chr17:24078882..24078896,+#_d5b33c7495c8d99efb22eff172caa39a | p2@Sbp |
| 1.16e-18 | FFCP PHASE1:Mm9::chr10:77520043..77520048,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr10:77520043..77520048, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr7:55002686..55002717,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr7:55002686..55002717, + |
| 1.16e-18 | FFCP PHASE1:Mm9::chr17:75581992..75582009,+#_d5b33c7495c8d99efb22eff172caa39a | p@chr17:75581992..75582009, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr6:42547375..42547383,-#_d5b33c7495c8d99efb22eff172caa39a | p10@Fam115e |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship type change: differentiates_from intermediate mesoderm (AAO:0010575) CHANGED TO: develops_from intermediate mesoderm (UBERON:0003064)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
