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{{UBERON
{{UBERON
|id=UBERON:0004456
|alt_id=
|name=entire sense organ system
|namespace=
|def="Sum of all sensory systems in an organism." []
|xref=FMA:78499
|is_a=UBERON:0000467
|synonym="sense organ system" EXACT [FMA:78499]
|comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
|comment=note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Sum of all sensory systems in an organism." []
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004456
|is_a=UBERON:0000467
|is_obsolete=
|located_in=
|located_in=
|name=entire sense organ system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=uberon_slim
|synonym="sense organ system" EXACT [FMA:78499]
|union_of=
|xref=FMA:78499
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:entire sense organ system
Namespace:FANTOM
Definition:"Sum of all sensory systems in an organism." []
Xrefs:
links:
FMA:78499
Synonyms: "sense organ system" EXACT [FMA:78499]
Comments:note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system),UBERON:0002390 (hematopoietic system),UBERON:0002405 (immune system),UBERON:0002416 (integumental system),UBERON:0002423 (hepatobiliary system)
part of:UBERON:0001032 (sensory system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004456 (entire sense organ system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.42e-69FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4p10@SIX3
4.42e-69FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_f77e93c1f737eb679db1865f1093e5a4p10@SIX3
5.33e-65FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31815126..31815139, -
5.33e-65FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818263..31818276, +
5.33e-65FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648ap1@E130218I03Rik
5.33e-65FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr16:21743134..21743139, -
5.33e-65FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648ap5@Zfp365
5.33e-65FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648ap8@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648ap1@Mir184
5.33e-65FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:5876195..5876219, -
5.33e-65FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr3:129525389..129525400, -
5.33e-65FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr3:129525389..129525400, -
5.33e-65FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31815126..31815139, -
5.33e-65FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648ap4@Dct
5.33e-65FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31817987..31818013, +
5.33e-65FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_4a6d79270fb9721e0d9020fec2f2648ap1@E130218I03Rik
5.33e-65FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818106..31818119, +
5.33e-65FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818263..31818276, +
5.33e-65FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr16:21743134..21743139, -
5.33e-65FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532391..77532408, -
5.33e-65FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532391..77532408, -
5.33e-65FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_4a6d79270fb9721e0d9020fec2f2648ap4@Dct
5.33e-65FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr10:127668442..127668453, +
5.33e-65FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648ap3@Osbp2
5.33e-65FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648ap6@Celf1
5.33e-65FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_4a6d79270fb9721e0d9020fec2f2648ap8@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31817987..31818013, +
5.33e-65FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr10:127668442..127668453, +
5.33e-65FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_4a6d79270fb9721e0d9020fec2f2648ap@chr17:31818106..31818119, +
5.33e-65FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:5876195..5876219, -
5.33e-65FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_4a6d79270fb9721e0d9020fec2f2648ap6@Celf1
5.33e-65FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532283..77532316, -
5.33e-65FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_4a6d79270fb9721e0d9020fec2f2648ap5@Zfp365
5.33e-65FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_4a6d79270fb9721e0d9020fec2f2648ap3@Osbp2
5.33e-65FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_4a6d79270fb9721e0d9020fec2f2648ap@chr11:77532283..77532316, -
5.33e-65FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_4a6d79270fb9721e0d9020fec2f2648ap1@Mir184
7.33e-60FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5p1@ENST00000456467
7.33e-60FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_32a08a8404e204953dd1ed1c5f27a2b5p1@ENST00000456467
9.27e-59FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58acccep3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_9942c7437846dc686331e6c5b58acccep3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58acccep@chr7:64675015..64675028, +
9.27e-59FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_9942c7437846dc686331e6c5b58acccep@chr7:64675015..64675028, +
1.08e-58FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64cap6@Pax6
1.08e-58FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64cap@chr6:97891135..97891147, +
1.08e-58FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_646bafa908446940807850b4ccfd64cap6@Pax6
1.08e-58FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_646bafa908446940807850b4ccfd64cap@chr6:97891135..97891147, +
1.26e-58FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4ap1@4933429O19Rik
1.26e-58FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_80a2f04281148a8d9fa2701e3ecade4ap1@4933429O19Rik
3.92e-58FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161dp1@ENST00000448923
3.92e-58FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_964299f0cf31996cf5595cd9ed70161dp1@ENST00000448923
5.97e-58FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656dep11@SIX3
5.97e-58FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_b68705cf2faee7ea9bfb455e213656dep11@SIX3
7.26e-58FFCP PHASE1:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113506006..113506025, -
7.26e-58FFCP PHASE2:Mm9::chr5:112688342..112688357,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112688342..112688357, +
7.26e-58FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr14:49501519..49501530, -
7.26e-58FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr7:28282354..28282365, +
7.26e-58FFCP PHASE1:Mm9::chr14:35413322..35413333,-#_bc63476fbd632aeca89d45f5cf3890c8p1@Opn4
7.26e-58FFCP PHASE1:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8p11@Rnf123
7.26e-58FFCP PHASE1:Mm9::chr10:93761330..93761358,-#_bc63476fbd632aeca89d45f5cf3890c8p1@Gm4792
7.26e-58FFCP PHASE2:Mm9::chr17:31816584..31816600,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31816584..31816600, +
7.26e-58FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147224..65147236, -
7.26e-58FFCP PHASE1:Mm9::chr3:34488839..34488876,+#_bc63476fbd632aeca89d45f5cf3890c8p1@ENSMUST00000173365
7.26e-58FFCP PHASE2:Mm9::chr8:77582172..77582183,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr8:77582172..77582183, +
7.26e-58FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Impg2
7.26e-58FFCP PHASE2:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Cngb3
7.26e-58FFCP PHASE1:Mm9::chr5:112692580..112692595,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112692580..112692595, +
7.26e-58FFCP PHASE1:Mm9::chr17:31817947..31817965,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31817947..31817965, +
7.26e-58FFCP PHASE1:Mm9::chr8:77582194..77582219,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr8:77582194..77582219, +
7.26e-58FFCP PHASE2:Mm9::chr5:112686483..112686494,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112686483..112686494, +
7.26e-58FFCP PHASE2:Mm9::chr5:112698505..112698537,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112698505..112698537, -
7.26e-58FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_bc63476fbd632aeca89d45f5cf3890c8p2@Cryga
7.26e-58FFCP PHASE1:Mm9::chr5:112688342..112688357,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112688342..112688357, +
7.26e-58FFCP PHASE1:Mm9::chr6:85969237..85969247,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr6:85969237..85969247, +
7.26e-58FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Cngb3
7.26e-58FFCP PHASE1:Mm9::chr6:3944001..3944016,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Gngt1
7.26e-58FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147201..65147212, -
7.26e-58FFCP PHASE2:Mm9::chr6:3944001..3944016,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Gngt1
7.26e-58FFCP PHASE1:Mm9::chr5:112690963..112690994,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112690963..112690994, +
7.26e-58FFCP PHASE1:Mm9::chr11:95705150..95705170,+#_bc63476fbd632aeca89d45f5cf3890c8p3@Gngt2
7.26e-58FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8p4@LOC100504989, p4@Timeless
7.26e-58FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:38092538..38092550, +
7.26e-58FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112675556..112675574, -
7.26e-58FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113506006..113506025, -
7.26e-58FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_bc63476fbd632aeca89d45f5cf3890c8p2@Hsd17b12
7.26e-58FFCP PHASE2:Mm9::chr5:112690963..112690994,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112690963..112690994, +
7.26e-58FFCP PHASE1:Mm9::chr1:65146997..65147021,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65146997..65147021, -
7.26e-58FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_bc63476fbd632aeca89d45f5cf3890c8p11@Rnf123
7.26e-58FFCP PHASE2:Mm9::chr1:38092602..38092616,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:38092602..38092616, +
7.26e-58FFCP PHASE1:Mm9::chr14:52730585..52730607,+#_bc63476fbd632aeca89d45f5cf3890c8p1@Rpgrip1
7.26e-58FFCP PHASE1:Mm9::chr10:127668686..127668697,+#_bc63476fbd632aeca89d45f5cf3890c8p4@LOC100504989, p4@Timeless
7.26e-58FFCP PHASE2:Mm9::chr5:112692580..112692595,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112692580..112692595, +
7.26e-58FFCP PHASE2:Mm9::chr1:65147224..65147236,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr1:65147224..65147236, -
7.26e-58FFCP PHASE2:Mm9::chr10:127668799..127668810,+#_bc63476fbd632aeca89d45f5cf3890c8p5@LOC100504989, p5@Timeless
7.26e-58FFCP PHASE2:Mm9::chr7:29477874..29477889,+#_bc63476fbd632aeca89d45f5cf3890c8p6@Fbxo27
7.26e-58FFCP PHASE2:Mm9::chr14:35413322..35413333,-#_bc63476fbd632aeca89d45f5cf3890c8p1@Opn4
7.26e-58FFCP PHASE1:Mm9::chr14:49501519..49501530,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr14:49501519..49501530, -
7.26e-58FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:112681470..112681483, -
7.26e-58FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31817947..31817965, +
7.26e-58FFCP PHASE1:Mm9::chr5:113507470..113507483,-#_bc63476fbd632aeca89d45f5cf3890c8p@chr5:113507470..113507483, -
7.26e-58FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_bc63476fbd632aeca89d45f5cf3890c8p@chr17:31818629..31818644, +

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