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{{UBERON
{{UBERON
|id=UBERON:0006876
|alt_id=
|name=vasculature of organ
|namespace=
|def=
|xref=FMA:74612
|is_a=UBERON:0002049
|synonym="organ vasculature" EXACT [FMA:74612];;"set of blood vessels of organ" EXACT [FMA:74612]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006876
|is_a=UBERON:0002049
|is_obsolete=
|located_in=
|located_in=
|name=vasculature of organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000062
|part_of=UBERON:0000062
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="organ vasculature" EXACT [FMA:74612];;"set of blood vessels of organ" EXACT [FMA:74612]
|union_of=
|xref=FMA:74612
}}
}}

Latest revision as of 17:59, 12 September 2014

Name:vasculature of organ
Namespace:FANTOM
Xrefs:
links:
FMA:74612
Synonyms: "organ vasculature" EXACT [FMA:74612]
"set of blood vessels of organ" EXACT [FMA:74612]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002049(vasculature)
part_of:UBERON:0000062(organ)



Children

is a:UBERON:0001886 (choroid plexus),UBERON:0002203 (vasculature of eye),UBERON:0005284 (brain vasculature),UBERON:0006877 (vasculature of liver),UBERON:0007303 (pharyngeal vasculature)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006876 (vasculature of organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.29e-58FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_8cca85e1f7eb367b3303f2fadc1106f9p30@PRKCH
1.29e-58FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_8cca85e1f7eb367b3303f2fadc1106f9p30@PRKCH
1.55e-57FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_370205553b8a328c2bce57a2009e3d07p@chrX:106198807..106198826, -
1.55e-57FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_370205553b8a328c2bce57a2009e3d07p@chrX:106198807..106198826, -
2.54e-48FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_6cec42a32855c91e9f0e7f8c0ca05856p33@PRKCH
2.54e-48FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_6cec42a32855c91e9f0e7f8c0ca05856p33@PRKCH
1.65e-41FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_113bb3d1bbddfcb361820c873c70d786p1@BC033145
1.65e-41FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_113bb3d1bbddfcb361820c873c70d786p1@BC033145
4.07e-41FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_657cb1cc0e1a541f1050e93929248656p@chr7:115723897..115723915, -
4.07e-41FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_657cb1cc0e1a541f1050e93929248656p@chr7:115723897..115723915, -
5.35e-41FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_8614068d96d82aa0481006dd0aab76a9p@chr12:97856211..97856221, +
5.35e-41FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_8614068d96d82aa0481006dd0aab76a9p@chr12:97856211..97856221, +
8.72e-40FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_9caac00f5f9a2bcc1ab163f33f053d32p16@ZIC1
8.72e-40FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_9caac00f5f9a2bcc1ab163f33f053d32p16@ZIC1
6.8e-37FFCP PHASE1:Hg19::chr1:201708474..201708479,+#_483a3e63179c681e74e656368288cdccp58@NAV1
6.8e-37FFCP PHASE1:Hg19::chr1:201708485..201708494,+#_483a3e63179c681e74e656368288cdccp55@NAV1
6.8e-37FFCP PHASE2:Hg19::chr1:201708474..201708479,+#_483a3e63179c681e74e656368288cdccp58@NAV1
6.8e-37FFCP PHASE2:Hg19::chr1:201708485..201708494,+#_483a3e63179c681e74e656368288cdccp55@NAV1
1.71e-34FFCP PHASE1:Hg19::chr3:147127961..147127972,+#_91ad7f00561b5e53d8842fb4d411bc1ep3@AB464362
1.71e-34FFCP PHASE2:Hg19::chr3:147127961..147127972,+#_91ad7f00561b5e53d8842fb4d411bc1ep3@AB464362
3.85e-33FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_a9d82ed336ddf63d2c5037248e5f77b4p@chr7:115723925..115723935, -
3.85e-33FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_a9d82ed336ddf63d2c5037248e5f77b4p@chr7:115723925..115723935, -
4.29e-33FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_4710871046aaf8602be3862354772e7cp@chr2:35680607..35680613, -
4.29e-33FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_4710871046aaf8602be3862354772e7cp@chr2:35680607..35680613, -
5.35e-33FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_3f087deb35c88a0a7995d085e9b7f9c2p5@SFRP1
5.35e-33FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_3f087deb35c88a0a7995d085e9b7f9c2p@chr13:36052762..36052767, -
5.35e-33FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_3f087deb35c88a0a7995d085e9b7f9c2p@chr13:36052762..36052767, -
5.35e-33FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_3f087deb35c88a0a7995d085e9b7f9c2p5@SFRP1
5.96e-33FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_bd6f32895776c600fbf7ac5ab082cff4p@chr7:131803806..131803815, +
5.96e-33FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_bd6f32895776c600fbf7ac5ab082cff4p@chr7:131803806..131803815, +
7.42e-33FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_acb76a74eb143dbe983d87cbac1e4b82p@chr16:58896129..58896134, -
7.42e-33FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_acb76a74eb143dbe983d87cbac1e4b82p@chr16:58896129..58896134, -
1.06e-32FFCP PHASE1:Hg19::chr22:31536360..31536389,-#_1ba3f9432fc4ab77c029c17d92462bc1p4@PLA2G3
1.06e-32FFCP PHASE2:Hg19::chr22:31536360..31536389,-#_1ba3f9432fc4ab77c029c17d92462bc1p4@PLA2G3
6.78e-32FFCP PHASE1:Hg19::chr3:147139152..147139163,+#_88499281df380f466781fb3fd2d09644p15@ZIC1
6.78e-32FFCP PHASE2:Hg19::chr3:147139152..147139163,+#_88499281df380f466781fb3fd2d09644p15@ZIC1
1.21e-30FFCP PHASE1:Hg19::chr3:147127489..147127503,+#_6482a56ee8661a1785f7591d55ade8fdp11@ZIC1
1.21e-30FFCP PHASE2:Hg19::chr3:147127489..147127503,+#_6482a56ee8661a1785f7591d55ade8fdp11@ZIC1
2.94e-29FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_c224665483fb464df71ee5926bde8f58p@chr5:31235359..31235362, +
2.94e-29FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_c224665483fb464df71ee5926bde8f58p@chr5:31235359..31235362, +
4.89e-29FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_434ec168ce14fe1a3351e1716c1dab11p1@CLRN1
4.89e-29FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_434ec168ce14fe1a3351e1716c1dab11p1@CLRN1
7.02e-29FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_e8276a959a00be075d8ce4f603512af0p@chr8:124692287..124692298, +
7.02e-29FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_e8276a959a00be075d8ce4f603512af0p@chr8:124692287..124692298, +
1.17e-27FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_3f8e29276594b2d15af817f74d2220dbp2@RIPPLY1
1.17e-27FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_3f8e29276594b2d15af817f74d2220dbp@chr3:146517344..146517356, +
1.17e-27FFCP PHASE1:Hg19::chr8:128902571..128902583,+#_3f8e29276594b2d15af817f74d2220dbp15@PVT1
1.17e-27FFCP PHASE2:Hg19::chr8:128902571..128902583,+#_3f8e29276594b2d15af817f74d2220dbp15@PVT1
1.17e-27FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_3f8e29276594b2d15af817f74d2220dbp2@RIPPLY1
1.17e-27FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_3f8e29276594b2d15af817f74d2220dbp@chr3:146517344..146517356, +
1.57e-26FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_09325b238fa852d4a839a748ea110e7ep20@RIMS1
1.57e-26FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_09325b238fa852d4a839a748ea110e7ep20@RIMS1
1.68e-26FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_3ab1889c38c30e07ed2154e17ac5d079p@chr14:87636652..87636657, -
1.68e-26FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_3ab1889c38c30e07ed2154e17ac5d079p@chr14:87636652..87636657, -
4.03e-26FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_2ccf4af1f648c647466d9bce532bba90p@chr17:1013251..1013277, -
4.03e-26FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_2ccf4af1f648c647466d9bce532bba90p@chr17:1013251..1013277, -
1.03e-25FFCP PHASE2:Hg19::chr3:147114260..147114290,-#_3887e7b96d6a01451ff6bc4a71773862p3@ZIC4
1.03e-25FFCP PHASE1:Hg19::chr3:147114260..147114290,-#_3887e7b96d6a01451ff6bc4a71773862p3@ZIC4
2.79e-25FFCP PHASE1:Hg19::chr3:147111317..147111328,+#_cde53bc7a28e0e2fe923e99261c199b6p8@ZIC1
2.79e-25FFCP PHASE2:Hg19::chr3:147111317..147111328,+#_cde53bc7a28e0e2fe923e99261c199b6p8@ZIC1
4.86e-25FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_6917a10242145a89a858e9597836b2a6p@chr5:78112479..78112482, +
4.86e-25FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_6917a10242145a89a858e9597836b2a6p@chr2:210798666..210798677, +
4.86e-25FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_6917a10242145a89a858e9597836b2a6p@chr5:78112479..78112482, +
4.86e-25FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_6917a10242145a89a858e9597836b2a6p@chr2:210798666..210798677, +
5.49e-25FFCP PHASE1:Hg19::chr8:24997361..24997368,-#_86be858d31ab83a07d493d3bcf4f91b3p@chr8:24997361..24997368, -
5.49e-25FFCP PHASE2:Hg19::chr8:24997361..24997368,-#_86be858d31ab83a07d493d3bcf4f91b3p@chr8:24997361..24997368, -
6.2e-25FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_dbee932af6d9698ec345a30f3cd23c9ep@chr13:36052713..36052724, -
6.2e-25FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_dbee932af6d9698ec345a30f3cd23c9ep@chr13:36052713..36052724, -
6.52e-25FFCP PHASE1:Hg19::chr11:8832119..8832124,-#_971577c1fc7ac220186b94e4418829ffp30@ST5
6.52e-25FFCP PHASE2:Hg19::chr11:8832119..8832124,-#_971577c1fc7ac220186b94e4418829ffp30@ST5
1.05e-24FFCP PHASE1:Hg19::chr17:1013333..1013374,-#_fef5583de498983275aa710a32becbb3p@chr17:1013333..1013374, -
1.05e-24FFCP PHASE1:Hg19::chr3:147129944..147129959,+#_fef5583de498983275aa710a32becbb3p@chr3:147129944..147129959, +
1.05e-24FFCP PHASE2:Hg19::chr17:1013333..1013374,-#_fef5583de498983275aa710a32becbb3p@chr17:1013333..1013374, -
1.05e-24FFCP PHASE2:Hg19::chr3:147129944..147129959,+#_fef5583de498983275aa710a32becbb3p@chr3:147129944..147129959, +
1.19e-24FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_8561f33a16b91b261a1a5b609d11bd82p7@PTPRU
1.19e-24FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_8561f33a16b91b261a1a5b609d11bd82p7@PTPRU
1.87e-24FFCP PHASE2:Hg19::chr3:147127904..147127942,+#_f19f0ad22fdbd3e3c76c699f0d35b3f6p1@AB464362
1.87e-24FFCP PHASE1:Hg19::chr3:147127904..147127942,+#_f19f0ad22fdbd3e3c76c699f0d35b3f6p1@AB464362
2.22e-24FFCP PHASE2:Hg19::chr3:147124307..147124336,-#_79ccccd1c5523fca2fce615ae6b3837fp2@ZIC4
2.22e-24FFCP PHASE1:Hg19::chr3:147124307..147124336,-#_79ccccd1c5523fca2fce615ae6b3837fp2@ZIC4
4.0e-24FFCP PHASE1:Hg19::chr3:8536114..8536125,-#_28aed36fa12279df37860b97ced25592p@chr3:8536114..8536125, -
4.0e-24FFCP PHASE2:Hg19::chr3:8536114..8536125,-#_28aed36fa12279df37860b97ced25592p@chr3:8536114..8536125, -
5.64e-24FFCP PHASE2:Hg19::chr11:89224564..89224574,-#_b2accde950b409d29eca92f6cc50eccfp8@NOX4
5.64e-24FFCP PHASE1:Hg19::chr11:89224564..89224574,-#_b2accde950b409d29eca92f6cc50eccfp8@NOX4
6.11e-24FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_a6fe179dcab0d187d22499834091c913p1@ENST00000526061
6.11e-24FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_a6fe179dcab0d187d22499834091c913p1@ENST00000526061
7.08e-24FFCP PHASE1:Hg19::chr3:147131157..147131175,+#_e831ffa2a862070f46646bf0f189408ep@chr3:147131157..147131175, +
7.08e-24FFCP PHASE2:Hg19::chr3:147131157..147131175,+#_e831ffa2a862070f46646bf0f189408ep@chr3:147131157..147131175, +
7.72e-24FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_26016d301accfe96f4d18e2c53d8ec82p@chr10:91294399..91294401, -
7.72e-24FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_26016d301accfe96f4d18e2c53d8ec82p@chr10:91294399..91294401, -
8.19e-24FFCP PHASE1:Hg19::chr3:147131841..147131863,+#_41a27521e4af694feb0f9248859c5202p@chr3:147131841..147131863, +
8.19e-24FFCP PHASE2:Hg19::chr3:147131841..147131863,+#_41a27521e4af694feb0f9248859c5202p@chr3:147131841..147131863, +
9.75e-24FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_50c32263af384f157fa0b4262d09592ep16@HECW1
9.75e-24FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_50c32263af384f157fa0b4262d09592ep16@HECW1
1.82e-23FFCP PHASE2:Hg19::chr3:147111285..147111298,+#_4af31eee167f8ccc23ebbf769d2a7664p10@ZIC1
1.82e-23FFCP PHASE1:Hg19::chr3:147111285..147111298,+#_4af31eee167f8ccc23ebbf769d2a7664p10@ZIC1
8.59e-23FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_42bd0c19abc1a2df92c56bcd731b2e2ap@chr2:66670833..66670853, +
8.59e-23FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_42bd0c19abc1a2df92c56bcd731b2e2ap@chr2:66670833..66670853, +
1.08e-22FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_8554cc8d6d77f9a3aa65ad1c6d732dc2p1@OPTC
1.08e-22FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_8554cc8d6d77f9a3aa65ad1c6d732dc2p1@OPTC

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