UBERON:0007500: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007500
|name=epithelial tube open at both ends
|namespace=
|def="An epithelial tube open at both ends that allows fluid flow." [AEO:JB]
|xref=AEO:000...") |
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|name=epithelial tube open at both ends | |name=epithelial tube open at both ends | ||
|namespace= | |namespace= | ||
|def="An epithelial tube open at both ends that allows fluid flow." [AEO:JB] | |def="An epithelial tube open at both ends that allows fluid flow." [AEO:JB, UBERONREF:0000001] | ||
|xref=AEO:0000116;;RETIRED_EHDAA2:0003116 | |xref=AEO:0000116;;RETIRED_EHDAA2:0003116 | ||
|is_a=UBERON:0003914 | |is_a=UBERON:0003914 | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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}} | }} | ||
Latest revision as of 17:08, 26 June 2012
| Name: | epithelial tube open at both ends | ||
|---|---|---|---|
| Definition: | "An epithelial tube open at both ends that allows fluid flow." [AEO:JB, UBERONREF:0000001] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007500 (epithelial tube open at both ends), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.37e-99 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_13c307918b19f5d46fc7b02c160f3100 | p2@SOX17 |
| 4.37e-99 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_13c307918b19f5d46fc7b02c160f3100 | p2@SOX17 |
| 3.03e-83 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_f0878b0204e40d8767d761fd47606021 | p@chr12:96830430..96830450, + |
| 3.03e-83 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_f0878b0204e40d8767d761fd47606021 | p@chr12:96830430..96830450, + |
| 9.39e-72 | FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_504af2a0d35dc14d3e78ef60a3756eb4 | p4@SULT1B1 |
| 9.39e-72 | FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_504af2a0d35dc14d3e78ef60a3756eb4 | p4@SULT1B1 |
| 1.22e-71 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_e1bbc0ae831dcca88c492b16910d5d84 | p@chr22:21138343..21138378, + |
| 1.22e-71 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_e1bbc0ae831dcca88c492b16910d5d84 | p@chr22:21138343..21138378, + |
| 3.75e-70 | FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_c16cc21cf51092cccd40497700695f97 | p3@SULT1B1 |
| 3.75e-70 | FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_c16cc21cf51092cccd40497700695f97 | p3@SULT1B1 |
| 4.26e-70 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_d0847c2e19d3bbe51e6718a75a0f55ea | p@chr3:30334038..30334060, + |
| 4.26e-70 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_d0847c2e19d3bbe51e6718a75a0f55ea | p@chr3:30334038..30334060, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_c0a912af1f2c17732bc3fdbd0dc0e3dc | p6@Npy1r |
| 1.65e-69 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_c0a912af1f2c17732bc3fdbd0dc0e3dc | p6@Npy1r |
| 3.42e-69 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_3dea7a8e6e04c215c51ff3663a8afb87 | p1@ENST00000439823 |
| 3.42e-69 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_3dea7a8e6e04c215c51ff3663a8afb87 | p1@ENST00000439823 |
| 1.32e-66 | FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_c8f86fdc887782ab1aad3083486246ff | p2@ESM1 |
| 1.32e-66 | FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_c8f86fdc887782ab1aad3083486246ff | p2@ESM1 |
| 1.79e-66 | FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_72602a917e0e2cf9c7514e67c05e5c36 | p@chr1:186946626..186946652, + |
| 1.79e-66 | FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_72602a917e0e2cf9c7514e67c05e5c36 | p@chr1:186946626..186946652, + |
| 2.82e-66 | FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_d49ea5ec47beb7385e505e441ab21689 | p10@ECE1 |
| 2.82e-66 | FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_d49ea5ec47beb7385e505e441ab21689 | p10@ECE1 |
| 1.57e-65 | FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_76b4304b8bdcee95f015edc1293c77b2 | p8@HHIP |
| 1.57e-65 | FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_76b4304b8bdcee95f015edc1293c77b2 | p8@HHIP |
| 4.84e-64 | FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_b02a6999e2a36ff7d5c6708ad5f850f9 | p@chr10:4823096..4823144, - |
| 4.84e-64 | FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_b02a6999e2a36ff7d5c6708ad5f850f9 | p@chr10:4823096..4823144, - |
| 1.6e-63 | FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_5fe5c1679e448d95de857c55e8d1ec72 | p10@HHIP |
| 1.6e-63 | FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_5fe5c1679e448d95de857c55e8d1ec72 | p10@HHIP |
| 1.6e-62 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_1b729de51c05c9c57b6d491b25ec9f98 | p@chr22:21138313..21138336, + |
| 1.6e-62 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_1b729de51c05c9c57b6d491b25ec9f98 | p@chr22:21138313..21138336, + |
| 3.56e-60 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_e9bb7d93975dbf899736223cb97d895d | p4@MMP1 |
| 3.56e-60 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_e9bb7d93975dbf899736223cb97d895d | p4@MMP1 |
| 1.21e-59 | FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_ec2661e717cb62bba25077616546128d | p6@HHIP |
| 1.21e-59 | FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_ec2661e717cb62bba25077616546128d | p6@HHIP |
| 1.43e-59 | FFCP PHASE1:Hg19::chr5:54281512..54281517,-#_2c5698be1be5ef4c1d3ee5c8a32366bb | p4@ESM1 |
| 1.43e-59 | FFCP PHASE2:Hg19::chr5:54281512..54281517,-#_2c5698be1be5ef4c1d3ee5c8a32366bb | p4@ESM1 |
| 7.93e-59 | FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_4363a4d0675f7677515dbb226e7a96f6 | p5@HHIP |
| 7.93e-59 | FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_4363a4d0675f7677515dbb226e7a96f6 | p5@HHIP |
| 1.41e-58 | FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_72753f362aa3aba982b0d7a060ca3423 | p24@WWTR1 |
| 1.41e-58 | FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_72753f362aa3aba982b0d7a060ca3423 | p24@WWTR1 |
| 5.62e-58 | FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_9552bda469eb0b406adc13313fbe80d6 | p@chr11:86649508..86649546, - |
| 5.62e-58 | FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_9552bda469eb0b406adc13313fbe80d6 | p@chr11:86649508..86649546, - |
| 8.9e-57 | FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_d9d4da0d6000b1e53251c00392a98860 | p4@HHIP |
| 8.9e-57 | FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_d9d4da0d6000b1e53251c00392a98860 | p4@HHIP |
| 4.2e-56 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_e638884dd331b33ca35f3705acf56d62 | p4@Il6st |
| 4.2e-56 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_e638884dd331b33ca35f3705acf56d62 | p5@Npy1r |
| 4.2e-56 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_e638884dd331b33ca35f3705acf56d62 | p4@Il6st |
| 4.2e-56 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_e638884dd331b33ca35f3705acf56d62 | p5@Npy1r |
| 4.77e-56 | FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_f7c09073be1f459d788a410c672577db | p7@HHIP |
| 4.77e-56 | FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_f7c09073be1f459d788a410c672577db | p7@HHIP |
| 1.07e-55 | FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_9e72a4c3505f11299a3b57ac37ce59c4 | p@chr11:102667477..102667490, - |
| 1.07e-55 | FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_9e72a4c3505f11299a3b57ac37ce59c4 | p@chr11:102667477..102667490, - |
| 1.11e-55 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_ce25243ef8b354d4f4e700346a98a0ff | p@chr2:65009852..65009866, - |
| 1.11e-55 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_ce25243ef8b354d4f4e700346a98a0ff | p@chr2:65009852..65009866, - |
| 2.0e-55 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_435ed286c65294e14b218d85f7fe7130 | p@chr11:102668178..102668206, + |
| 2.0e-55 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_435ed286c65294e14b218d85f7fe7130 | p@chr11:102668178..102668206, + |
| 9.51e-55 | FFCP PHASE1:Hg19::chr4:86700590..86700615,+#_8591b8288f5adf7193e7246183d1070a | p@chr4:86700590..86700615, + |
| 9.51e-55 | FFCP PHASE2:Hg19::chr4:86700590..86700615,+#_8591b8288f5adf7193e7246183d1070a | p@chr4:86700590..86700615, + |
| 1.16e-54 | FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_1173250bae86a26b6d30e4b657b44249 | p2@RHOJ |
| 1.16e-54 | FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_1173250bae86a26b6d30e4b657b44249 | p2@RHOJ |
| 5.43e-54 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_cb4aee90ad1fa1388f0461c6cb8c3c2b | p@chr11:102662162..102662217, - |
| 5.43e-54 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_cb4aee90ad1fa1388f0461c6cb8c3c2b | p@chr11:102662162..102662217, - |
| 1.56e-53 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_eaacb1d97f342e39a2e5578165fc199d | p3@MMP1 |
| 1.56e-53 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_eaacb1d97f342e39a2e5578165fc199d | p3@MMP1 |
| 2.27e-53 | FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_93b47c68623fb8704f6e9e6217555a16 | p@chr11:128562673..128562716, - |
| 2.27e-53 | FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_93b47c68623fb8704f6e9e6217555a16 | p@chr11:128562673..128562716, - |
| 5.18e-53 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_80a72af13e549ea0345bd7f8d1f2aa54 | p@chr4:7846444..7846449, - |
| 5.18e-53 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_80a72af13e549ea0345bd7f8d1f2aa54 | p@chr4:7846444..7846449, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chrX:160839744..160839754, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:87574327..87574332, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:87574327..87574332, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr8:69228447..69228492, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_54ed7726bc09ad56e85a992372ed8ba8 | p5@Adamts2 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr8:69228447..69228492, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr2:178190171..178190178, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr2:112043522..112043530, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chrX:160839744..160839754, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:14827154..14827169, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr2:178190171..178190178, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:14802633..14802637, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:14802633..14802637, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr17:14827154..14827169, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_54ed7726bc09ad56e85a992372ed8ba8 | p@chr2:112043522..112043530, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_54ed7726bc09ad56e85a992372ed8ba8 | p5@Adamts2 |
| 4.12e-52 | FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_09e8fa9637bd8306c93c66b062355742 | p5@MMP1 |
| 4.12e-52 | FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_09e8fa9637bd8306c93c66b062355742 | p5@MMP1 |
| 9.8e-52 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_1bfdf5a0121e2c1800ae812fa4255be5 | p@chr11:102661517..102661541, - |
| 9.8e-52 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_1bfdf5a0121e2c1800ae812fa4255be5 | p@chr11:102661517..102661541, - |
| 1.64e-51 | FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_612583a4b73d60cf6705e6ef5c1f7a67 | p5@OXA1L |
| 1.64e-51 | FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_612583a4b73d60cf6705e6ef5c1f7a67 | p5@OXA1L |
| 2.14e-51 | FFCP PHASE1:Hg19::chr4:145567461..145567482,+#_c812b41f5280ea3ac897b5d69c3753a9 | p9@HHIP |
| 2.14e-51 | FFCP PHASE2:Hg19::chr4:145567461..145567482,+#_c812b41f5280ea3ac897b5d69c3753a9 | p9@HHIP |
| 6.64e-51 | FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_2dd3aed7bf826ca3b7a71c1dcce8c4cd | p@chr4:54931911..54931926, - |
| 6.64e-51 | FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_2dd3aed7bf826ca3b7a71c1dcce8c4cd | p@chr4:54931911..54931926, - |
| 7.65e-51 | FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_4cb03bb70d1afade1a721be49b445c00 | p13@HHIP |
| 7.65e-51 | FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_4cb03bb70d1afade1a721be49b445c00 | p13@HHIP |
| 2.55e-50 | FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_7852bacb0dff2231b706df81bbf3b356 | p@chr11:102668708..102668742, + |
| 2.55e-50 | FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_7852bacb0dff2231b706df81bbf3b356 | p@chr11:102668708..102668742, + |
| 7.98e-50 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_92f740268b80b161ac79d8c312d1de4f | p@chr6:53359400..53359406, + |
| 7.98e-50 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_92f740268b80b161ac79d8c312d1de4f | p@chr6:53359400..53359406, + |
