FFCP PHASE1:Hg19::chr10:112651237..112651241,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:112651237..112651241,+ to FFCP PHASE1:Hg19::chr10:112651237..112651241,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:112651237..112651241,+ | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_at_chr10:112651237..112651241,+ | |||
|id=chr10:112651237..112651241,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-13!140;CL:0000838!3.43e-11!52;CL:0000037!4.29e-11!172;CL:0000566!4.29e-11!172;CL:0000542!8.59e-11!53;CL:0000051!8.59e-11!53;CL:0000988!2.06e-10!182;CL:0002087!5.56e-10!119;CL:0002032!8.39e-10!165;CL:0000837!8.39e-10!165;CL:0002031!1.20e-09!124;CL:0000791!3.54e-07!18;CL:0000789!3.54e-07!18;CL:0002420!3.54e-07!18;CL:0002419!3.54e-07!18;CL:0000790!3.54e-07!18;CL:0000094!5.06e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.92e-21;6!CL:0000791;6.83e-21;18!CL:0000789;6.83e-21;18!CL:0002419;6.83e-21;18!CL:0000084;7.99e-15;25!CL:0000542;1.20e-13;53!CL:0000775;1.49e-11;3!CL:0000623;2.64e-11;3!CL:0000226;4.65e-11;3!CL:0000842;4.65e-11;3!CL:0000236;1.24e-09;13!CL:0000094;2.36e-09;8!CL:0000625;3.77e-07;11!CL:0000081;6.31e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.74e-23,52;CL:0000542,1.43e-22,53;CL:0000051,1.43e-22,53;CL:0000624,2.26e-21,6;CL:0000791,5.99e-21,18;CL:0000789,5.99e-21,18;CL:0002420,5.99e-21,18;CL:0002419,5.99e-21,18;CL:0000790,5.99e-21,18;CL:0000738,3.92e-19,136;CL:0002087,3.33e-16,115;CL:0000084,7.28e-15,25;CL:0000827,7.28e-15,25;CL:0000037,7.94e-15,168;CL:0000988,6.81e-14,177;CL:0002032,2.87e-12,161;CL:0000837,2.87e-12,161;CL:0002031,1.09e-11,120;CL:0000775,1.21e-11,3;CL:0000623,2.04e-11,3;CL:0000825,2.04e-11,3;CL:0000226,3.42e-11,3;CL:0000842,3.42e-11,3;CL:0000094,2.13e-09,8;CL:0000236,6.70e-09,14;CL:0000625,3.82e-07,11;CL:0000081,5.88e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.83e-21;18!CL:0000051;1.20e-13;53!UBERON:0005754;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;6.46e-09;1!UBERON:0006868;6.46e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,7.85e-09,1;UBERON:0006868,7.85e-09,1 | |||
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| ||
|short_description=p@chr10:112651237..112651241,+ | |||
}} | }} |
Latest revision as of 10:26, 23 July 2015
Short description: | p@chr10:112651237..112651241, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112651237..112651241, + |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.74e-23 | 52 |
lymphocyte | 1.43e-22 | 53 |
common lymphoid progenitor | 1.43e-22 | 53 |
CD4-positive, alpha-beta T cell | 2.26e-21 | 6 |
mature alpha-beta T cell | 5.99e-21 | 18 |
alpha-beta T cell | 5.99e-21 | 18 |
immature T cell | 5.99e-21 | 18 |
mature T cell | 5.99e-21 | 18 |
immature alpha-beta T cell | 5.99e-21 | 18 |
leukocyte | 3.92e-19 | 136 |
nongranular leukocyte | 3.33e-16 | 115 |
T cell | 7.28e-15 | 25 |
pro-T cell | 7.28e-15 | 25 |
hematopoietic stem cell | 7.94e-15 | 168 |
hematopoietic cell | 6.81e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.87e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.09e-11 | 120 |
neutrophil | 1.21e-11 | 3 |
natural killer cell | 2.04e-11 | 3 |
pro-NK cell | 2.04e-11 | 3 |
single nucleate cell | 3.42e-11 | 3 |
mononuclear cell | 3.42e-11 | 3 |
granulocyte | 2.13e-09 | 8 |
B cell | 6.70e-09 | 14 |
CD8-positive, alpha-beta T cell | 3.82e-07 | 11 |
blood cell | 5.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 7.85e-09 | 1 |
seminal fluid secreting gland | 7.85e-09 | 1 |