FFCP PHASE1:Hg19::chr10:118032133..118032181,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:118032133..118032181,- to FFCP PHASE1:Hg19::chr10:118032133..118032181,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490345_5end | |||
|cluster_id=chr10:118032133..118032181,- | |||
|description=CAGE_peak_2_at_GFRA1_5end | |||
|id=chr10:118032133..118032181,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.72e-25!115;UBERON:0000475!4.09e-20!365;UBERON:0003075!1.53e-17!86;UBERON:0007284!1.53e-17!86;UBERON:0005743!1.72e-16!86;UBERON:0002346!1.11e-15!90;UBERON:0003056!1.19e-15!61;UBERON:0000955!6.10e-15!69;UBERON:0006238!6.10e-15!69;UBERON:0001049!7.01e-15!57;UBERON:0005068!7.01e-15!57;UBERON:0006241!7.01e-15!57;UBERON:0007135!7.01e-15!57;UBERON:0001017!8.69e-15!82;UBERON:0000073!1.08e-14!94;UBERON:0001016!1.08e-14!94;UBERON:0002616!3.40e-14!59;UBERON:0000153!7.07e-14!129;UBERON:0007811!7.07e-14!129;UBERON:0000033!1.70e-13!123;UBERON:0003080!1.85e-13!42;UBERON:0000481!7.76e-13!347;UBERON:0002780!9.05e-13!41;UBERON:0001890!9.05e-13!41;UBERON:0006240!9.05e-13!41;UBERON:0001893!1.01e-11!34;UBERON:0002020!1.24e-11!34;UBERON:0003528!1.24e-11!34;UBERON:0002791!1.86e-11!33;UBERON:0001869!1.98e-11!32;UBERON:0004121!2.07e-11!169;UBERON:0000924!1.74e-10!173;UBERON:0006601!1.74e-10!173;UBERON:0000468!7.05e-10!659;UBERON:0000956!1.76e-09!25;UBERON:0000203!1.76e-09!25;UBERON:0000483!1.76e-09!309;UBERON:0000119!2.29e-09!312;UBERON:0000062!1.27e-08!511;UBERON:0002619!2.18e-08!22;UBERON:0001950!1.17e-07!20;UBERON:0000064!2.90e-07!219;UBERON:0000489!5.03e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.77e-08;11!UBERON:0001869;2.16e-07;32!UBERON:0002791;5.87e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.64e-16,114;UBERON:0003075,2.50e-08,82;UBERON:0007284,2.50e-08,82;UBERON:0007625,3.39e-08,11;UBERON:0001869,4.77e-08,32;UBERON:0003056,9.91e-08,61;UBERON:0002346,1.85e-07,86;UBERON:0002791,2.64e-07,32;UBERON:0001893,2.97e-07,34;UBERON:0010371,4.09e-07,104 | |||
|phase1_expression=0.54503513781167,1.92690471501885,0.563817616383885,0,0,0,0,1.26343974685366,5.48489819219661,0.982935746006035,1.39560233594486,0,0,0.37129905888014,0.662794751455832,0,0,0,0,3.0780264519197,2.24400760368678,5.64218498660558,0.572471974262113,2.73748850145768,3.01302335027527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,2.1686349143074,1.00267582127178,3.18662341713812,0,0.486634870302636,2.6469748805939,4.21285855178871,3.95256535619067,1.37528029272598,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,1.20848795132744,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0,0,0,1.18800285728205,1.23633464639278,0,0,0,0,0,0,1.5324389789951,0.751190294532984,0.226864366320042,2.33206526395521,5.12537733164562,2.7551147150743,0.600182192168805,1.33968288009971,1.8034837803194,4.83903826462134,0.337552664482532,0.194874010322397,2.52433774244115,6.81169249953015,6.95078044320891,5.32514388774922,2.41805035746337,1.18692414617341,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.932949495138334,0,0.72995471815166,3.12899064659632,7.71889125831462,0,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,7.60530208930985,9.82827216677626,4.72631925345123,0,0,4.63233087806019,0,0,0,0,0.651616610620649,0,1.44331342025273,6.83989389352953,2.23076519048061,0.288732895522148,0,0,15.0138835612262,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0,0,0,2.29193055334967,0,1.71072446022705,0.102827492703324,0,0,0,1.30788020649984,0,0.904902010304444,3.57656445851882,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,5.27174682081482,16.0806710167759,0,0.868687840005475,1.02738161275192,1.43248770591916,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,1.59498939234882,0,0.813795071099207,5.61521326133179,6.78030157429215,11.1968714674094,2.10854546986884,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,1.14814448164607,0,2.09799063935079,2.25599806453706,0.462092022626489,3.92174884588428,5.84556898613043,2.00548094896464,0,0.170093705276516,2.80690690932781,3.08454505380579,2.70946437543853,4.01351819083883,0.509752546090077,0,6.71624264166535,0,0,4.61610225209501,6.23227826829441,1.62689197332152,5.46117361732928,0,0,0,0,1.6068392984416,0.386682873168488,0,0.921022048356777,0.827019434907183,0.751941714077915,1.45016693914229,0.511359764496605,2.8490251406956,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,1.58189712359363,2.47819252100972,0,0,0,0,1.43897966066652,1.09814811894422,1.17812402345686,0,0,0,4.8763373908959,0,0,0.682499557039929,0.848432591722276,0,0,0,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0,0,8.44430541190656,6.25660296623814,0,0,0,0,0,5.93105944893709,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05794985995417,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,5.18044769452781,3.59169090190492,0,2.76125442755818,0,2.48831670129446,0.0898683511473268,0,0,3.25523238601881,0,1.11136990144637,3.87733098438087,1.20598527610407,0,11.198393726665,0,9.42499448065232,0,0,0,0.344743373241465,0,1.04174996959975,0,6.27101480852121,0,0.110579259931225,0,0.658156191461918,0,0,4.07836370070124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,4.97630965539252,3.18447232212021,4.27721101453538,0.296521128680622,1.23563938946503,0.313265848516366,0.808813595768125,12.8412423567806,0.702793337176017,0,0,0,1.97292201424695,3.62972148145992,0.61214552326098,0.947798694427319,1.20258735531594,0.207376382794494,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,4.07353869251362,0,3.16373037092745,0,0,0.569797163602908,0,0,6.83049583165928,0,0,0,0,0,0,0,0.67952103036807,0.941425616810999,1.73396969981747,0,1.20084057741958,1.36905378891993,0,0.859530882839914,0,4.74780082162832,2.7499250881402,0,0.599037001496973,0.858452096273142,2.00854311697685,2.75452237195578,0,0,0,0,0,0.590564889088493,0,1.59045937961861,1.63444087333891,0.160753148465019,0,0,0,0,1.21499113316049,0,0.788057072991982,2.20309270166992,0,0,0,4.2881719582402,1.98627591109629,0,1.62899880526114,0,0.326587360109409,0,0,3.23737241392301,0,5.8620893471233,1.32506888912221,0.646414781807753,0.92562821219883,0,0,1.17466153824464,2.20086027139532,2.89967338743037,3.47316215268366,0,0,0,1.08803560673895,1.2534494701135,0.612691153526923,1.31149052283922,0,0.886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| ||
|short_description=p2@GFRA1 | |||
}} | }} |
Latest revision as of 13:50, 16 September 2015
Short description: | p2@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GFRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490345_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.64e-16 | 114 |
neural plate | 2.50e-08 | 82 |
presumptive neural plate | 2.50e-08 | 82 |
pigment epithelium of eye | 3.39e-08 | 11 |
cerebral hemisphere | 4.77e-08 | 32 |
pre-chordal neural plate | 9.91e-08 | 61 |
neurectoderm | 1.85e-07 | 86 |
regional part of telencephalon | 2.64e-07 | 32 |
telencephalon | 2.97e-07 | 34 |
ecto-epithelium | 4.09e-07 | 104 |