FFCP PHASE1:Hg19::chr10:119135001..119135008,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:119135001..119135008,- to FFCP PHASE1:Hg19::chr10:119135001..119135008,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118987 | |EntrezGene=118987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26974 | |HGNC=26974 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEN9 | |UniProt=Q8NEN9 | ||
|association_with_transcript=-23bp_to_ENST00000334464_5end | |||
|cluster_id=chr10:119135001..119135008,- | |||
|description=CAGE_peak_3_at_PDZD8_5end | |||
|id=chr10:119135001..119135008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.86e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.05e-15!41;UBERON:0001890!4.05e-15!41;UBERON:0006240!4.05e-15!41;UBERON:0001049!7.93e-15!57;UBERON:0005068!7.93e-15!57;UBERON:0006241!7.93e-15!57;UBERON:0007135!7.93e-15!57;UBERON:0003080!2.18e-14!42;UBERON:0002020!4.61e-14!34;UBERON:0003528!4.61e-14!34;UBERON:0001893!5.42e-14!34;UBERON:0002791!1.97e-13!33;UBERON:0001869!4.45e-13!32;UBERON:0003075!9.67e-13!86;UBERON:0007284!9.67e-13!86;UBERON:0002346!3.05e-12!90;UBERON:0005743!7.62e-12!86;UBERON:0000955!2.13e-11!69;UBERON:0006238!2.13e-11!69;UBERON:0001017!2.95e-11!82;UBERON:0000073!3.54e-11!94;UBERON:0001016!3.54e-11!94;UBERON:0007023!3.77e-11!115;UBERON:0002616!4.85e-11!59;UBERON:0000956!2.18e-10!25;UBERON:0000203!2.18e-10!25;UBERON:0003056!2.20e-10!61;UBERON:0002619!1.05e-09!22;UBERON:0000153!2.63e-09!129;UBERON:0007811!2.63e-09!129;UBERON:0000033!2.69e-09!123;UBERON:0001950!9.24e-09!20;UBERON:0004121!1.64e-08!169;UBERON:0000924!2.37e-08!173;UBERON:0006601!2.37e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.74e-18;3!UBERON:0005382;8.74e-18;3!UBERON:0001874;9.12e-14;1!UBERON:0000369;1.38e-13;4!UBERON:0002435;1.38e-13;4!UBERON:0000204;1.38e-13;4!UBERON:0002021;6.79e-11;5!UBERON:0002791;5.04e-10;32!UBERON:0001869;2.47e-09;32!UBERON:0003528;1.01e-08;34!UBERON:0002020;1.01e-08;34!UBERON:0009663;3.77e-08;7!UBERON:0001893;9.07e-08;34!UBERON:0001873;9.86e-08;2!UBERON:0000473;3.90e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.08e-17,3;UBERON:0005382,1.08e-17,3;UBERON:0001874,1.25e-13,1;UBERON:0000369,1.62e-13,4;UBERON:0002435,1.62e-13,4;UBERON:0000204,1.62e-13,4;UBERON:0010082,1.62e-13,4;UBERON:0002021,7.89e-11,5;UBERON:0002791,2.26e-09,32;UBERON:0001869,2.26e-09,32;UBERON:0003528,7.84e-09,34;UBERON:0002020,7.84e-09,34;UBERON:0001893,7.84e-09,34;UBERON:0009663,4.12e-08,7;UBERON:0000073,6.21e-08,53;UBERON:0002616,6.21e-08,53;UBERON:0001873,9.87e-08,2;UBERON:0010122,9.87e-08,2;UBERON:0001049,1.70e-07,56;UBERON:0005068,1.70e-07,56;UBERON:0006241,1.70e-07,56;UBERON:0007135,1.70e-07,56;UBERON:0002780,2.42e-07,41;UBERON:0001890,2.42e-07,41;UBERON:0003080,2.42e-07,41;UBERON:0006240,2.42e-07,41;UBERON:0000473,3.90e-07,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.382067028739756,0.410502947249729,0.236132343941038,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0.293600439334847,1.10799081706375,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0.590129310341499,0.786021525498329,0.411202997999018,0.167186495390678,0,0,1.94826728407911,0,0.589211814949674,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,4.87613732627923,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0.412210116953756,0,0.18611685633159,0.337552664482532,0,0,0,0,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.402115889646523,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0.264145302039678,0.207328115540772,0.864719720501769,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.224262168690721,0,0.36669142910475,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0.65147236858747,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.328508624055237,0,0.464841513839837,0,0,0,0.114814448164607,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.576570202095319,0.638063562472921,0.4046311234222,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.318852545457645,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0.626719583092093,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,1.33496573924465,0,0,0,0,0.614321404198464,0,0.562677665642051,0.111308705022906,0,0.211125408127993,0.398495976502139,0.552567831062295,0.251932747854276,0,0.246169610922139,0.311039587661807,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0.236387681767936,0,0,0,2.65722415744152,0.482385754501632,0,0.221158519862449,0,0.87754158861589,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0.158936578980379,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0.313265848516366,0.606610196826093,0,0.937057782901357,0,0,0.728341138602278,0.394584402849391,1.20990716048664,0.91821828489147,0.379119477770928,0.450970258243478,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0.293977192243133,0.174118413160805,0,0,0.0967563312890851,0.219267951258557,0,0.193978032976839,0.176512253383001,0,0.27408384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| ||
|short_description=p3@PDZD8 | |||
}} | }} |
Latest revision as of 15:29, 16 September 2015
Short description: | p3@PDZD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDZD8_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000334464_5end |
EntrezGene: | PDZD8 |
HGNC: | 26974 |
UniProt: | Q8NEN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.08e-17 | 3 |
dorsal striatum | 1.08e-17 | 3 |
putamen | 1.25e-13 | 1 |
corpus striatum | 1.62e-13 | 4 |
striatum | 1.62e-13 | 4 |
ventral part of telencephalon | 1.62e-13 | 4 |
future corpus striatum | 1.62e-13 | 4 |
occipital lobe | 7.89e-11 | 5 |
regional part of telencephalon | 2.26e-09 | 32 |
cerebral hemisphere | 2.26e-09 | 32 |
brain grey matter | 7.84e-09 | 34 |
gray matter | 7.84e-09 | 34 |
telencephalon | 7.84e-09 | 34 |
telencephalic nucleus | 4.12e-08 | 7 |
regional part of nervous system | 6.21e-08 | 53 |
regional part of brain | 6.21e-08 | 53 |
caudate nucleus | 9.87e-08 | 2 |
future caudate nucleus | 9.87e-08 | 2 |
neural tube | 1.70e-07 | 56 |
neural rod | 1.70e-07 | 56 |
future spinal cord | 1.70e-07 | 56 |
neural keel | 1.70e-07 | 56 |
regional part of forebrain | 2.42e-07 | 41 |
forebrain | 2.42e-07 | 41 |
anterior neural tube | 2.42e-07 | 41 |
future forebrain | 2.42e-07 | 41 |
testis | 3.90e-07 | 8 |