FFCP PHASE1:Hg19::chr10:120116527..120116544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_ENST00000445161_5end | |||
|cluster_id=chr10:120116527..120116544,+ | |||
|description=CAGE_peak_2_at_ENST00000445161_5end | |||
|id=chr10:120116527..120116544,+ | |||
|ontology_enrichment_celltype=CL:0000242!5.99e-41!2;CL:0000167!3.45e-21!1;CL:0000164!3.45e-21!1;CL:0000502!3.45e-21!1;CL:0000172!3.45e-21!1;CL:0000173!3.45e-21!1;CL:0002351!3.45e-21!1;CL:0000312!4.64e-17!5;CL:0000240!2.18e-14!6;CL:0000311!2.18e-14!6;CL:0000079!2.18e-14!6;CL:0000237!2.18e-14!6;CL:0000036!2.18e-14!6;CL:0000357!2.18e-14!6;CL:0000114!2.18e-14!6;CL:0000362!4.90e-11!8;CL:0002159!3.88e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.99e-98;2!CL:0000242;1.99e-98;2!CL:0000312;3.00e-40;5!CL:0000240;9.08e-34;6!CL:0000311;9.08e-34;6!CL:0000079;9.08e-34;6!CL:0000237;9.08e-34;6!CL:0000362;6.07e-23;9!CL:0002159;3.53e-15;14!CL:0000095;1.77e-11;17!CL:0002319;2.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.55e-98,2;CL:0000312,2.71e-40,5;CL:0000240,8.35e-34,6;CL:0000311,8.35e-34,6;CL:0000079,8.35e-34,6;CL:0000237,8.35e-34,6;CL:0000036,8.35e-34,6;CL:0000357,8.35e-34,6;CL:0000114,8.35e-34,6;CL:0000362,5.74e-23,9;CL:0002159,3.41e-15,14;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;9.08e-34;6!CL:0000114;9.08e-34;6!UBERON:0007297;4.90e-26;2 | |||
|ontology_enrichment_disease=DOID:4430!3.45e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0003135!4.55e-29!11;UBERON:0006947!1.82e-27!3;UBERON:0004054!1.82e-27!3;UBERON:0001301!1.88e-21!1;UBERON:0000989!4.22e-21!1;UBERON:0008811!4.22e-21!1;UBERON:0006258!4.22e-21!1;UBERON:0005876!4.22e-21!1;UBERON:0004874!4.22e-21!1;UBERON:0001000!5.16e-21!1;UBERON:0005352!5.16e-21!1;UBERON:0005904!7.00e-21!4;UBERON:0003101!8.89e-15!22;UBERON:0000079!8.89e-15!22;UBERON:0002106!8.29e-08!3;UBERON:0004854!8.29e-08!3;UBERON:0009034!8.29e-08!3;UBERON:0002095!8.29e-08!3;UBERON:0004782!8.29e-08!3;UBERON:0003281!8.29e-08!3;UBERON:0009664!8.29e-08!3;UBERON:0002296!8.29e-08!3;UBERON:0005602!8.29e-08!3;UBERON:0001179!8.29e-08!3;UBERON:0006293!8.29e-08!3;UBERON:0003133!5.93e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.88e-50;1!UBERON:0006947;7.35e-18;3!UBERON:0004054;7.35e-18;3!UBERON:0001003;3.04e-14;15!UBERON:0007376;3.04e-14;15!UBERON:0005904;9.39e-14;4!UBERON:0010371;3.63e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.42e-50,1;UBERON:0006947,8.00e-18,3;UBERON:0004054,8.00e-18,3;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15;UBERON:0005904,1.00e-13,4;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7737601512349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8600566090477,2.46365748638403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2120345121428,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7737601512349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8600566090477,2.46365748638403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2120345121428,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000445161 | |||
}} | }} |
Latest revision as of 10:54, 23 July 2015
Short description: | p2@ENST00000445161 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000445161_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENST00000445161_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.55e-98 | 2 |
keratinocyte | 2.71e-40 | 5 |
stratified squamous epithelial cell | 8.35e-34 | 6 |
keratin accumulating cell | 8.35e-34 | 6 |
stratified epithelial cell | 8.35e-34 | 6 |
keratinizing barrier epithelial cell | 8.35e-34 | 6 |
epithelial fate stem cell | 8.35e-34 | 6 |
stratified epithelial stem cell | 8.35e-34 | 6 |
surface ectodermal cell | 8.35e-34 | 6 |
epidermal cell | 5.74e-23 | 9 |
general ecto-epithelial cell | 3.41e-15 | 14 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
ecto-epithelial cell | 7.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.42e-50 | 1 |
male genital duct | 8.00e-18 | 3 |
internal male genitalia | 8.00e-18 | 3 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
duct of male reproductive system | 1.00e-13 | 4 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |