FFCP PHASE1:Hg19::chr10:121652192..121652203,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:121652192..121652203,+ to FFCP PHASE1:Hg19::chr10:121652192..121652203,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11196 | |EntrezGene=11196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17018 | |HGNC=17018 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Y8 | |UniProt=Q9Y6Y8 | ||
|association_with_transcript=-19bp_to_ENST00000369075,uc001leu.1,uc010qtc.1_5end | |||
|cluster_id=chr10:121652192..121652203,+ | |||
|description=CAGE_peak_2_at_SEC23IP_5end | |||
|id=chr10:121652192..121652203,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.11e-15!53;CL:0000051!6.11e-15!53;CL:0000838!1.30e-14!52;CL:0000791!3.70e-09!18;CL:0000789!3.70e-09!18;CL:0002420!3.70e-09!18;CL:0002419!3.70e-09!18;CL:0000790!3.70e-09!18;CL:0000084!4.65e-09!25;CL:0000827!4.65e-09!25;CL:0000037!1.36e-08!172;CL:0000566!1.36e-08!172;CL:0000988!1.86e-07!182;CL:0002032!3.30e-07!165;CL:0000837!3.30e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.87e-12;18!CL:0000789;2.87e-12;18!CL:0002419;2.87e-12;18!CL:0000084;1.69e-11;25!CL:0000542;6.00e-10;53!CL:0000625;6.15e-10;11!CL:0000945;5.38e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.37e-17,53;CL:0000051,5.37e-17,53;CL:0000838,1.78e-16,52;CL:0000791,5.25e-12,18;CL:0000789,5.25e-12,18;CL:0002420,5.25e-12,18;CL:0002419,5.25e-12,18;CL:0000790,5.25e-12,18;CL:0000084,2.59e-11,25;CL:0000827,2.59e-11,25;CL:0000037,4.06e-10,168;CL:0000625,5.09e-10,11;CL:0000988,4.19e-09,177;CL:0002032,1.68e-08,161;CL:0000837,1.68e-08,161;CL:0000945,3.81e-07,24;CL:0000826,3.81e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.87e-12;18!CL:0000051;6.00e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.41e-08,51;DOID:0060083,1.41e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SEC23IP | |||
}} | }} |
Latest revision as of 18:27, 16 September 2015
Short description: | p2@SEC23IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC23IP_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000369075, uc001leu.1, uc010qtc.1_5end |
EntrezGene: | SEC23IP |
HGNC: | 17018 |
UniProt: | Q9Y6Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.37e-17 | 53 |
common lymphoid progenitor | 5.37e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.78e-16 | 52 |
mature alpha-beta T cell | 5.25e-12 | 18 |
alpha-beta T cell | 5.25e-12 | 18 |
immature T cell | 5.25e-12 | 18 |
mature T cell | 5.25e-12 | 18 |
immature alpha-beta T cell | 5.25e-12 | 18 |
T cell | 2.59e-11 | 25 |
pro-T cell | 2.59e-11 | 25 |
hematopoietic stem cell | 4.06e-10 | 168 |
CD8-positive, alpha-beta T cell | 5.09e-10 | 11 |
hematopoietic cell | 4.19e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-08 | 161 |
lymphocyte of B lineage | 3.81e-07 | 24 |
pro-B cell | 3.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.41e-08 | 51 |
immune system cancer | 1.41e-08 | 51 |