FFCP PHASE1:Hg19::chr10:3826296..3826315,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:3826296..3826315,+ to FFCP PHASE1:Hg19::chr10:3826296..3826315,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3826296..3826315,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:3826296..3826315,+ | |||
|id=chr10:3826296..3826315,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.62e-44!42;CL:0000860!1.05e-41!45;CL:0000738!1.02e-39!140;CL:0002087!3.27e-36!119;CL:0002031!1.34e-34!124;CL:0000766!7.68e-33!76;CL:0000037!1.39e-30!172;CL:0000566!1.39e-30!172;CL:0002032!9.01e-29!165;CL:0000837!9.01e-29!165;CL:0000988!2.59e-27!182;CL:0002009!3.05e-27!65;CL:0002194!5.31e-27!63;CL:0000576!5.31e-27!63;CL:0000040!5.31e-27!63;CL:0000559!5.31e-27!63;CL:0000839!1.89e-26!70;CL:0000557!4.34e-26!71;CL:0000763!9.08e-20!112;CL:0000049!9.08e-20!112;CL:0000791!2.32e-12!18;CL:0000789!2.32e-12!18;CL:0002420!2.32e-12!18;CL:0002419!2.32e-12!18;CL:0000790!2.32e-12!18;CL:0002393!7.60e-12!9;CL:0002397!7.60e-12!9;CL:0000134!5.74e-11!358;CL:0002320!1.37e-10!365;CL:0000084!1.22e-09!25;CL:0000827!1.22e-09!25;CL:0000838!8.28e-09!52;CL:0000542!1.69e-08!53;CL:0000051!1.69e-08!53;CL:0000219!2.69e-08!390;CL:0000094!2.99e-08!8;CL:0000625!8.89e-08!11;CL:0000624!2.07e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-43;33!CL:0002057;1.39e-43;33!CL:0000576;4.16e-37;48!CL:0000473;3.80e-30;39!CL:0000234;3.80e-30;39!CL:0000766;1.85e-26;69!CL:0002393;7.81e-18;6!CL:0002397;7.81e-18;6!CL:0002087;6.02e-17;104!CL:0000094;1.57e-13;8!CL:0000738;1.77e-11;136!CL:0000763;9.65e-11;100!CL:0000081;1.29e-09;11!CL:0000767;1.39e-09;3!CL:0000623;2.89e-09;3!CL:0000875;6.01e-09;3!CL:0002396;6.01e-09;3!CL:0000791;1.70e-08;18!CL:0000789;1.70e-08;18!CL:0002419;1.70e-08;18!CL:0000771;1.19e-07;2!CL:0000988;5.18e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.26e-71,42;CL:0002057,5.26e-71,42;CL:0000473,6.35e-61,48;CL:0000234,6.35e-61,48;CL:0000766,5.75e-54,72;CL:0000738,5.48e-51,136;CL:0002009,6.98e-48,61;CL:0002194,8.05e-47,59;CL:0000576,8.05e-47,59;CL:0000040,8.05e-47,59;CL:0000559,8.05e-47,59;CL:0002087,4.97e-45,115;CL:0000557,8.52e-43,67;CL:0000839,6.20e-41,66;CL:0002031,1.19e-40,120;CL:0000037,9.38e-39,168;CL:0002032,1.50e-37,161;CL:0000837,1.50e-37,161;CL:0000988,4.16e-36,177;CL:0000763,2.04e-34,108;CL:0000049,2.04e-34,108;CL:0002393,2.74e-25,9;CL:0002397,2.74e-25,9;CL:0000094,1.28e-13,8;CL:0000134,3.83e-12,354;CL:0002320,1.18e-11,361;CL:0000219,6.15e-10,386;CL:0000081,1.11e-09,11;CL:0000767,1.14e-09,3;CL:0000623,2.63e-09,3;CL:0000825,2.63e-09,3;CL:0000875,4.26e-09,3;CL:0002396,4.26e-09,3;CL:0000791,1.11e-08,18;CL:0000789,1.11e-08,18;CL:0002420,1.11e-08,18;CL:0002419,1.11e-08,18;CL:0000790,1.11e-08,18;CL:0000048,2.03e-08,427;CL:0000723,4.01e-08,433;CL:0000034,9.64e-08,441;CL:0000771,1.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-48;42!CL:0000049;2.14e-09;108!CL:0000790;1.70e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.36e-30!102;UBERON:0003061!1.36e-30!102;UBERON:0002193!8.57e-27!112;UBERON:0002371!1.70e-22!80;UBERON:0001474!1.18e-20!86;UBERON:0002405!9.85e-19!115;UBERON:0004765!4.68e-16!101;UBERON:0001434!4.68e-16!101;UBERON:0002384!5.56e-10!375;UBERON:0000178!4.21e-08!15;UBERON:0000179!4.21e-08!15;UBERON:0000463!4.21e-08!15;UBERON:0003081!2.01e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-10;15!UBERON:0000179;2.20e-10;15!UBERON:0000463;2.20e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-44,98;UBERON:0003061,1.16e-44,98;UBERON:0002193,1.71e-39,108;UBERON:0002371,1.17e-36,76;UBERON:0001474,2.60e-33,82;UBERON:0002405,3.75e-30,93;UBERON:0004765,1.54e-29,90;UBERON:0001434,1.13e-25,100;UBERON:0003081,7.90e-16,203;UBERON:0002204,8.11e-12,167;UBERON:0002384,5.48e-11,371;UBERON:0000178,1.97e-10,15;UBERON:0000179,1.97e-10,15;UBERON:0000463,1.97e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,8.65401409067589,1.91914699048606,2.01260960310899,0,0,0.739508020333575,0,0,0.587200878669695,4.9859586767869,3.60980005446255,2.82114131930607,0,0,0,1.16318591023652,0.755751887377619,0.970336244751265,1.62700325833979,0.411167888021826,1.85823822537062,2.3015391385772,1.5369642391746,3.54723344832878,1.03423704220986,1.29096936716765,4.06279459783025,1.31769637679823,0.818718450173537,2.02251136000576,2.44867113896722,2.56743221660875,4.47535988059329,0.659702600373432,0.199463657621632,2.55734850319616,4.93355705668593,1.13477044938228,4.35975574296902,3.76872997885115,1.0429658368404,2.82345498116652,0,2.20966581592539,3.16462387440884,1.47878700418359,4.67729459923096,2.09658645508376,2.02191536063691,1.05123824989054,0.964353520182481,1.71007646244749,1.59133341759272,2.73996230646951,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,1.96709770113833,0.786021525498329,1.85041349099558,0,0.977766799900771,1.89379122293893,1.94826728407911,0.445641827540694,0.883817722424512,1.55073726208535,0.812411591295047,0.512365278902701,0.260118695119756,0.164437904603676,0.552700035571697,0.579606171470105,4.00373720537563,4.0131124213457,3.1360657141493,0.453237370790265,1.53288197440768,3.4362744548263,3.28925599625354,0.318565414324097,0,1.90090408889675,0.903450714466637,0.255973222308837,2.49861453104692,0.947109008176067,0,2.01606743224732,1.87208137048455,1.30341963494519,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.72502059887614,2.05348858047597,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,3.72973962092432,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,1.24060815673732,1.72571360654893,0.533637789017222,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,1.42939065274673,1.64544909234478,1.94541993357815,1.62009431171434,3.17250070517708,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.393709926058995,0,0,0,0,0,0,1.5748172408605,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0.218531143927391,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.806971285846153,0.448527450322454,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,8.65401409067589,1.91914699048606,2.01260960310899,0,0,0.739508020333575,0,0,0.587200878669695,4.9859586767869,3.60980005446255,2.82114131930607,0,0,0,1.16318591023652,0.755751887377619,0.970336244751265,1.62700325833979,0.411167888021826,1.85823822537062,2.3015391385772,1.5369642391746,3.54723344832878,1.03423704220986,1.29096936716765,4.06279459783025,1.31769637679823,0.818718450173537,2.02251136000576,2.44867113896722,2.56743221660875,4.47535988059329,0.659702600373432,0.199463657621632,2.55734850319616,4.93355705668593,1.13477044938228,4.35975574296902,3.76872997885115,1.0429658368404,2.82345498116652,0,2.20966581592539,3.16462387440884,1.47878700418359,4.67729459923096,2.09658645508376,2.02191536063691,1.05123824989054,0.964353520182481,1.71007646244749,1.59133341759272,2.73996230646951,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,1.96709770113833,0.786021525498329,1.85041349099558,0,0.977766799900771,1.89379122293893,1.94826728407911,0.445641827540694,0.883817722424512,1.55073726208535,0.812411591295047,0.512365278902701,0.260118695119756,0.164437904603676,0.552700035571697,0.579606171470105,4.00373720537563,4.0131124213457,3.1360657141493,0.453237370790265,1.53288197440768,3.4362744548263,3.28925599625354,0.318565414324097,0,1.90090408889675,0.903450714466637,0.255973222308837,2.49861453104692,0.947109008176067,0,2.01606743224732,1.87208137048455,1.30341963494519,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.72502059887614,2.05348858047597,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,3.72973962092432,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,1.24060815673732,1.72571360654893,0.533637789017222,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,1.42939065274673,1.64544909234478,1.94541993357815,1.62009431171434,3.17250070517708,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.393709926058995,0,0,0,0,0,0,1.5748172408605,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0.218531143927391,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.806971285846153,0.448527450322454,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:3826296..3826315,+ | |||
}} | }} |
Latest revision as of 13:32, 23 July 2015
Short description: | p@chr10:3826296..3826315, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3826296..3826315, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-44 | 98 |
blood island | 1.16e-44 | 98 |
hemolymphoid system | 1.71e-39 | 108 |
bone marrow | 1.17e-36 | 76 |
bone element | 2.60e-33 | 82 |
immune system | 3.75e-30 | 93 |
skeletal element | 1.54e-29 | 90 |
skeletal system | 1.13e-25 | 100 |
lateral plate mesoderm | 7.90e-16 | 203 |
musculoskeletal system | 8.11e-12 | 167 |
connective tissue | 5.48e-11 | 371 |
blood | 1.97e-10 | 15 |
haemolymphatic fluid | 1.97e-10 | 15 |
organism substance | 1.97e-10 | 15 |