FFCP PHASE1:Hg19::chr10:76910697..76910731,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:76910697..76910731,+ to FFCP PHASE1:Hg19::chr10:76910697..76910731,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142891 | |EntrezGene=142891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26320 | |HGNC=26320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=410bp_to_AB587437,BC140219,BC146556_5end | |||
|cluster_id=chr10:76910697..76910731,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_7_at_SAMD8_5end | |||
|id=chr10:76910697..76910731,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.34e-17;3!UBERON:0003057;4.34e-17;3!UBERON:0006222;3.54e-13;1!UBERON:0006601;6.03e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.22e-24!57;UBERON:0005068!7.22e-24!57;UBERON:0006241!7.22e-24!57;UBERON:0007135!7.22e-24!57;UBERON:0002616!4.36e-19!59;UBERON:0001017!1.05e-18!82;UBERON:0007023!1.18e-18!115;UBERON:0005743!1.70e-18!86;UBERON:0000955!1.34e-17!69;UBERON:0006238!1.34e-17!69;UBERON:0000073!8.42e-16!94;UBERON:0001016!8.42e-16!94;UBERON:0002780!1.28e-15!41;UBERON:0001890!1.28e-15!41;UBERON:0006240!1.28e-15!41;UBERON:0003080!4.14e-15!42;UBERON:0002346!7.91e-15!90;UBERON:0003075!8.13e-15!86;UBERON:0007284!8.13e-15!86;UBERON:0002298!3.32e-13!8;UBERON:0002020!2.24e-12!34;UBERON:0003528!2.24e-12!34;UBERON:0001893!2.73e-12!34;UBERON:0002308!4.11e-11!9;UBERON:0000125!4.11e-11!9;UBERON:0002791!4.58e-11!33;UBERON:0000033!1.64e-10!123;UBERON:0003076!2.03e-10!15;UBERON:0003057!2.03e-10!15;UBERON:0001869!6.64e-10!32;UBERON:0000153!1.36e-09!129;UBERON:0007811!1.36e-09!129;UBERON:0003056!1.47e-09!61;UBERON:0004733!4.18e-08!12;UBERON:0002028!4.18e-08!12;UBERON:0007277!4.18e-08!12;UBERON:0002420!1.05e-07!9;UBERON:0007245!1.05e-07!9;UBERON:0010009!1.05e-07!9;UBERON:0010011!1.05e-07!9;UBERON:0000454!1.05e-07!9;UBERON:0000988!1.35e-07!3;UBERON:0000924!1.46e-07!173;UBERON:0006601!1.46e-07!173;UBERON:0006331!1.50e-07!3;UBERON:0009663!1.62e-07!7;UBERON:0001896!1.88e-07!3;UBERON:0005290!1.88e-07!3;UBERON:0010096!1.88e-07!3;UBERON:0004121!2.16e-07!169;UBERON:0004732!2.26e-07!13;UBERON:0001950!2.88e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.05e-49;6!UBERON:0000988;2.49e-36;3!UBERON:0000125;2.01e-32;9!UBERON:0002308;2.01e-32;9!UBERON:0002148;9.01e-25;2!UBERON:0006331;9.01e-25;2!UBERON:0009662;9.01e-25;2!UBERON:0004733;9.10e-25;12!UBERON:0002028;9.10e-25;12!UBERON:0001875;6.02e-24;2!UBERON:0006514;6.02e-24;2!UBERON:0004732;7.25e-23;13!UBERON:0000073;5.53e-19;53!UBERON:0002616;5.53e-19;53!UBERON:0002240;4.34e-17;3!UBERON:0005174;4.34e-17;3!UBERON:0001137;4.34e-17;3!UBERON:0001896;7.29e-17;3!UBERON:0005290;7.29e-17;3!UBERON:0009663;1.55e-15;7!UBERON:0002038;3.54e-13;1!UBERON:0009661;3.54e-13;1!UBERON:0002950;3.54e-13;1!UBERON:0001891;3.54e-13;1!UBERON:0002780;5.41e-13;41!UBERON:0001890;5.41e-13;41!UBERON:0007195;7.24e-13;1!UBERON:0007190;7.24e-13;1!UBERON:0002680;1.48e-12;9!UBERON:0001895;1.48e-12;9!UBERON:0002420;3.22e-12;9!UBERON:0007245;3.22e-12;9!UBERON:0010009;3.22e-12;9!UBERON:0010011;3.22e-12;9!UBERON:0000454;3.22e-12;9!UBERON:0003528;3.84e-10;34!UBERON:0002020;3.84e-10;34!UBERON:0001017;6.89e-10;75!UBERON:0001016;8.18e-10;83!UBERON:0000955;1.07e-09;68!UBERON:0001893;8.97e-09;34!UBERON:0007023;1.97e-08;114!UBERON:0002791;2.17e-08;32!UBERON:0001869;1.02e-07;32!UBERON:0001894;1.33e-07;7!UBERON:0001897;4.55e-07;2!UBERON:0010225;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.45e-49,6;UBERON:0001049,2.22e-44,56;UBERON:0005068,2.22e-44,56;UBERON:0006241,2.22e-44,56;UBERON:0007135,2.22e-44,56;UBERON:0003076,2.14e-38,15;UBERON:0003057,2.14e-38,15;UBERON:0000988,2.08e-36,3;UBERON:0000073,7.15e-35,53;UBERON:0002616,7.15e-35,53;UBERON:0000125,1.31e-32,9;UBERON:0002308,1.31e-32,9;UBERON:0001017,6.10e-30,81;UBERON:0003075,6.10e-30,82;UBERON:0007284,6.10e-30,82;UBERON:0002346,1.75e-28,86;UBERON:0001016,7.72e-27,89;UBERON:0000955,1.53e-26,68;UBERON:0006238,1.53e-26,68;UBERON:0002148,7.09e-25,2;UBERON:0006331,7.09e-25,2;UBERON:0009662,7.09e-25,2;UBERON:0004733,7.67e-25,12;UBERON:0002028,7.67e-25,12;UBERON:0007277,7.67e-25,12;UBERON:0001875,2.97e-24,2;UBERON:0006514,2.97e-24,2;UBERON:0010371,2.72e-23,104;UBERON:0004732,6.19e-23,13;UBERON:0007023,2.61e-21,114;UBERON:0010314,5.34e-18,132;UBERON:0002240,4.90e-17,3;UBERON:0005174,4.90e-17,3;UBERON:0001137,4.90e-17,3;UBERON:0001896,6.22e-17,3;UBERON:0005290,6.22e-17,3;UBERON:0010096,6.22e-17,3;UBERON:0002780,8.37e-17,41;UBERON:0001890,8.37e-17,41;UBERON:0003080,8.37e-17,41;UBERON:0006240,8.37e-17,41;UBERON:0003528,9.44e-16,34;UBERON:0002020,9.44e-16,34;UBERON:0009663,1.24e-15,7;UBERON:0004121,2.65e-13,171;UBERON:0000924,2.65e-13,171;UBERON:0006601,2.65e-13,171;UBERON:0002038,4.23e-13,1;UBERON:0009661,4.23e-13,1;UBERON:0002950,4.23e-13,1;UBERON:0001891,4.23e-13,1;UBERON:0009616,4.23e-13,1;UBERON:0010286,4.23e-13,1;UBERON:0007190,6.06e-13,1;UBERON:0007195,9.73e-13,1;UBERON:0002680,1.40e-12,9;UBERON:0001895,1.40e-12,9;UBERON:0010092,1.40e-12,9;UBERON:0002420,2.71e-12,9;UBERON:0007245,2.71e-12,9;UBERON:0010009,2.71e-12,9;UBERON:0010011,2.71e-12,9;UBERON:0000454,2.71e-12,9;UBERON:0000025,8.47e-12,192;UBERON:0001893,1.41e-11,34;UBERON:0003056,4.05e-11,61;UBERON:0011216,9.97e-10,223;UBERON:0004111,4.83e-09,240;UBERON:0002791,1.01e-08,32;UBERON:0001869,1.06e-08,32;UBERON:0001894,1.38e-07,7;UBERON:0006222,1.38e-07,7;UBERON:0001897,4.69e-07,2;UBERON:0010225,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.808813595768125,0,2.10838001152805,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.9166753044879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,2.77688463659649,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,2.86704597845036,0.887432412294818,3.84997698236577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.321146125482298,0,0,1.02558182120378,0,0.760729777106397,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,0,1.71222687523548,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,3.53442611479525,0.72350050919134,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0.490296643507811,0,11.1895826255519,3.26751040359795,0,0,0,0,0,0,0.352894871715692,0,0,0,2.00675416412032,0,0.271965960763659,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.620597975171371,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.808813595768125,0,2.10838001152805,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.9166753044879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,2.77688463659649,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,2.86704597845036,0.887432412294818,3.84997698236577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.321146125482298,0,0,1.02558182120378,0,0.760729777106397,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,0,1.71222687523548,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,3.53442611479525,0.72350050919134,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0.490296643507811,0,11.1895826255519,3.26751040359795,0,0,0,0,0,0,0.352894871715692,0,0,0,2.00675416412032,0,0.271965960763659,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.620597975171371,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p7@SAMD8 | |||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p7@SAMD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SAMD8_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | 410bp_to_AB587437, BC140219, BC146556_5end |
EntrezGene: | SAMD8 |
HGNC: | 26320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data