FFCP PHASE1:Hg19::chr10:88126240..88126264,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:88126240..88126264,- to FFCP PHASE1:Hg19::chr10:88126240..88126264,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2894 | |EntrezGene=2894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4575 | |HGNC=4575 | ||
|TSSclassifier=strong | |||
|UniProt=G3V186,A8KAN9,Q9ULK0 | |UniProt=G3V186,A8KAN9,Q9ULK0 | ||
|association_with_transcript=0bp_to_ENST00000464741,NM_017551,uc001kdl.1,uc009xsu.1_5end | |||
|cluster_id=chr10:88126240..88126264,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_GRID1_5end | |||
|id=chr10:88126240..88126264,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-19;82!UBERON:0006241;6.34e-09;3!UBERON:0003057;6.34e-09;3!UBERON:0002532;7.50e-07;206!UBERON:0010316;7.50e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-62!115;UBERON:0001049!2.42e-40!57;UBERON:0005068!2.42e-40!57;UBERON:0006241!2.42e-40!57;UBERON:0007135!2.42e-40!57;UBERON:0001017!4.45e-34!82;UBERON:0000073!4.15e-33!94;UBERON:0001016!4.15e-33!94;UBERON:0003080!4.70e-33!42;UBERON:0005743!5.75e-33!86;UBERON:0000955!1.65e-32!69;UBERON:0006238!1.65e-32!69;UBERON:0002616!1.99e-32!59;UBERON:0002780!2.74e-32!41;UBERON:0001890!2.74e-32!41;UBERON:0006240!2.74e-32!41;UBERON:0001893!9.02e-32!34;UBERON:0002020!9.82e-32!34;UBERON:0003528!9.82e-32!34;UBERON:0002791!1.12e-30!33;UBERON:0003075!1.55e-29!86;UBERON:0007284!1.55e-29!86;UBERON:0001869!2.32e-29!32;UBERON:0002346!2.76e-28!90;UBERON:0001950!1.70e-22!20;UBERON:0002619!3.33e-22!22;UBERON:0000956!1.59e-21!25;UBERON:0000203!1.59e-21!25;UBERON:0003056!1.46e-20!61;UBERON:0000153!4.53e-18!129;UBERON:0007811!4.53e-18!129;UBERON:0004121!1.50e-17!169;UBERON:0000033!1.87e-17!123;UBERON:0000924!3.51e-17!173;UBERON:0006601!3.51e-17!173;UBERON:0000062!8.02e-14!511;UBERON:0002308!7.92e-12!9;UBERON:0000125!7.92e-12!9;UBERON:0002420!1.77e-11!9;UBERON:0007245!1.77e-11!9;UBERON:0010009!1.77e-11!9;UBERON:0010011!1.77e-11!9;UBERON:0000454!1.77e-11!9;UBERON:0000064!1.32e-10!219;UBERON:0002298!5.79e-10!8;UBERON:0000025!1.30e-09!194;UBERON:0009663!1.30e-09!7;UBERON:0000481!1.50e-09!347;UBERON:0001871!4.50e-09!7;UBERON:0000477!7.05e-09!286;UBERON:0000475!1.02e-08!365;UBERON:0003076!1.51e-08!15;UBERON:0003057!1.51e-08!15;UBERON:0000468!1.85e-08!659;UBERON:0004111!3.27e-08!241;UBERON:0000200!6.95e-08!6;UBERON:0000467!9.52e-08!625;UBERON:0000480!1.15e-07!626;UBERON:0000922!5.10e-07!612;UBERON:0001872!7.78e-07!5;UBERON:0002021!8.73e-07!5;UBERON:0004732!9.25e-07!13;UBERON:0002050!9.46e-07!605;UBERON:0005423!9.46e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.46e-47;34!UBERON:0003528;2.45e-45;34!UBERON:0002020;2.45e-45;34!UBERON:0002791;3.95e-44;32!UBERON:0001869;6.10e-44;32!UBERON:0002780;1.05e-41;41!UBERON:0001890;1.05e-41;41!UBERON:0000073;5.08e-39;53!UBERON:0002616;5.08e-39;53!UBERON:0002619;1.05e-37;22!UBERON:0001950;3.12e-37;20!UBERON:0000956;1.02e-32;25!UBERON:0000203;1.02e-32;25!UBERON:0001017;1.18e-29;75!UBERON:0000955;2.07e-28;68!UBERON:0001016;8.94e-26;83!UBERON:0000125;1.42e-24;9!UBERON:0002308;1.42e-24;9!UBERON:0009663;1.42e-19;7!UBERON:0002420;2.08e-19;9!UBERON:0007245;2.08e-19;9!UBERON:0010009;2.08e-19;9!UBERON:0010011;2.08e-19;9!UBERON:0000454;2.08e-19;9!UBERON:0002298;2.69e-16;6!UBERON:0000200;1.04e-15;6!UBERON:0004732;3.07e-15;13!UBERON:0007023;1.02e-14;114!UBERON:0001872;1.62e-13;5!UBERON:0004733;5.79e-13;12!UBERON:0002028;5.79e-13;12!UBERON:0000369;1.46e-11;4!UBERON:0002435;1.46e-11;4!UBERON:0000204;1.46e-11;4!UBERON:0011216;1.56e-10;132!UBERON:0002021;2.26e-09;5!UBERON:0001871;2.37e-09;6!UBERON:0000988;3.57e-09;3!UBERON:0005383;4.37e-09;3!UBERON:0005382;4.37e-09;3!UBERON:0002240;6.34e-09;3!UBERON:0005174;6.34e-09;3!UBERON:0001137;6.34e-09;3!UBERON:0001896;8.05e-09;3!UBERON:0005290;8.05e-09;3!UBERON:0001870;2.69e-08;3!UBERON:0010314;1.38e-07;132!UBERON:0002680;4.28e-07;9!UBERON:0001895;4.28e-07;9!UBERON:0005162;4.82e-07;2!UBERON:0000122;4.82e-07;2!UBERON:0001875;5.32e-07;2!UBERON:0006514;5.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.31e-78,56;UBERON:0005068,8.31e-78,56;UBERON:0006241,8.31e-78,56;UBERON:0007135,8.31e-78,56;UBERON:0000073,1.14e-70,53;UBERON:0002616,1.14e-70,53;UBERON:0001017,5.30e-69,81;UBERON:0000955,2.99e-67,68;UBERON:0006238,2.99e-67,68;UBERON:0001016,1.17e-66,89;UBERON:0002780,1.22e-58,41;UBERON:0001890,1.22e-58,41;UBERON:0003080,1.22e-58,41;UBERON:0006240,1.22e-58,41;UBERON:0003075,5.99e-55,82;UBERON:0007284,5.99e-55,82;UBERON:0001893,1.17e-54,34;UBERON:0003528,1.38e-54,34;UBERON:0002020,1.38e-54,34;UBERON:0007023,4.34e-53,114;UBERON:0002346,7.83e-52,86;UBERON:0002791,1.09e-49,32;UBERON:0001869,1.86e-49,32;UBERON:0003056,5.86e-42,61;UBERON:0010371,9.24e-41,104;UBERON:0010314,4.52e-38,132;UBERON:0002619,1.01e-37,22;UBERON:0001950,3.26e-37,20;UBERON:0000956,9.92e-33,25;UBERON:0000203,9.92e-33,25;UBERON:0004121,5.43e-30,171;UBERON:0000924,5.43e-30,171;UBERON:0006601,5.43e-30,171;UBERON:0011216,2.12e-26,223;UBERON:0000125,1.20e-24,9;UBERON:0002308,1.20e-24,9;UBERON:0009663,1.18e-19,7;UBERON:0000025,1.78e-19,192;UBERON:0002420,1.84e-19,9;UBERON:0007245,1.84e-19,9;UBERON:0010009,1.84e-19,9;UBERON:0010011,1.84e-19,9;UBERON:0000454,1.84e-19,9;UBERON:0003076,2.40e-19,15;UBERON:0003057,2.40e-19,15;UBERON:0002298,3.38e-16,6;UBERON:0000200,8.90e-16,6;UBERON:0004732,3.31e-15,13;UBERON:0004111,5.66e-14,240;UBERON:0001872,1.98e-13,5;UBERON:0004733,6.15e-13,12;UBERON:0002028,6.15e-13,12;UBERON:0007277,6.15e-13,12;UBERON:0000483,9.71e-12,306;UBERON:0000369,1.21e-11,4;UBERON:0002435,1.21e-11,4;UBERON:0000204,1.21e-11,4;UBERON:0010082,1.21e-11,4;UBERON:0000119,1.69e-11,309;UBERON:0002021,2.26e-09,5;UBERON:0001871,2.44e-09,6;UBERON:0000988,3.67e-09,3;UBERON:0005383,4.09e-09,3;UBERON:0005382,4.09e-09,3;UBERON:0002240,7.17e-09,3;UBERON:0005174,7.17e-09,3;UBERON:0001137,7.17e-09,3;UBERON:0001896,9.83e-09,3;UBERON:0005290,9.83e-09,3;UBERON:0010096,9.83e-09,3;UBERON:0001870,1.98e-08,3;UBERON:0002680,4.06e-07,9;UBERON:0001895,4.06e-07,9;UBERON:0010092,4.06e-07,9;UBERON:0005162,4.90e-07,2;UBERON:0000122,4.90e-07,2;UBERON:0001875,5.33e-07,2;UBERON:0006514,5.33e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.640695746278505,0,0,0,0,0.532685175939381,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,5.62677665642051,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,2.90799823828566,4.82394110441627,3.99227596002388,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,2.65722415744152,6.99459344027366,0,1.99042667876204,1.18219047581419,1.31631238292384,0,0,2.84715956464049,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,13.143220931232,1.60515529459758,4.2167600230561,0,0,0.728341138602278,0.789168805698781,1.20990716048664,0.30607276163049,1.13735843331278,0,0,0,0,0.313932918407225,2.38944859545918,0,0,0,0,0,1.22308667769421,0,0.387025325156341,0.146178634172371,0.246346371159628,0.193978032976839,0.0882561266915003,2.03382666702479,0.548167698587004,0,3.79864775735272,0,0.561111741760736,1.92107695265417,0.19980960958213,0,0,0,0,0,0,2.71808412147228,3.13808538937,0,0,7.20504346451747,15.4703078147952,0,0,0,0,0.916641696046735,0.717873024576814,0.998395002494955,0.858452096273142,0.446342914883745,1.81395375714161,0,0,0,0,0,0.0984274815147488,0,0,5.72054305668618,0,0,0,0,0,5.1637123159321,0,0.157611414598396,0.367182116944987,0,0,0.959575986597226,0.714695326373367,0,0,0,0,1.30634944043764,0,0,0.340776043570843,0,0.146552233678082,0,4.39562051629272,9.52074732547368,0.342173675768659,0,1.38823636338003,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.327872630709804,0,1.77213635993397,2.56255156294123,4.88244629755349,2.29363678276028,5.65738162837947,5.27819425001759,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,1.0362910251936,0.303859956177382,5.66859588222096,0,0,0,0.327609848846413,0,0,0,2.66729324235352,0,0.567515953566836,0,0,0,0,0.862598491173454,0,1.85656384926424,0,0,0,0,0.318004350653419,0,0,0,0,5.90908870887428,5.6678630530234,8.46059453002902,4.1023272848151,0.756215088665154,6.77741074149335,3.55246420390072,11.4215536207324,0,0.589848616738702,0,0,0,0,0.795664888465099,0.977734268540344,0,0.781514011233092,0,0,0,5.13285643099799,4.68646859168308,4.96048311602842,6.72207588055412,1.09394961803644,0.548257766857182,0.496211178389294,0.175871244359621,0,0,1.00885116665647,0,0,0.266107110487916,0,0,5.64148783707703,6.44573180915921,0,0,0.863424021355654,8.3271262655481,0,1.82631744101899,0,0,1.71543706023975,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0.410651227424988,0,0.971421986118279,0.467878926924211,0,0.118920090777569,0,0.109940516745429,0,0.308696632431779,0.218559560503957,0,0.245148321753905,2.35676547101626,6.67448788190814,5.34683520588755,2.5359343655004,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,19.4941833085974,0,5.91525964660958,1.30905207102113,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0.250707539292375,0.985123076837112,0.535928260312357,4.1458471972939,11.4810625406704,1.0661699095049,1.42838658878244,0,0.124149428591716,0.33639558774184,3.50059370529907,6.06351566874658,0,0.342233301085281,0.26940821205835,0.21516661617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| ||
|short_description=p3@GRID1 | |||
}} | }} |
Latest revision as of 17:18, 19 September 2015
Short description: | p3@GRID1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRID1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000464741, NM_017551, uc001kdl.1, uc009xsu.1_5end |
EntrezGene: | GRID1 |
HGNC: | 4575 |
UniProt: | G3V186A8KAN9Q9ULK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data