FFCP PHASE1:Hg19::chr10:90743363..90743366,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90743363..90743366,- to FFCP PHASE1:Hg19::chr10:90743363..90743366,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:90743363..90743366,- | |||
|description=CAGE_peak_at_chr10:90743363..90743366,- | |||
|id=chr10:90743363..90743366,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.04e-13;1!DOID:3350;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.61e-13,1;DOID:3350,2.12e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.38e-14;15!UBERON:0000179;8.38e-14;15!UBERON:0000463;8.38e-14;15!UBERON:0000996;1.04e-13;1!UBERON:0002331;3.99e-12;10!UBERON:0002390;9.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.85e-14,1;UBERON:0000178,7.72e-14,15;UBERON:0000179,7.72e-14,15;UBERON:0000463,7.72e-14,15;UBERON:0002331,4.00e-12,10;UBERON:0000358,4.00e-12,10;UBERON:0000307,4.00e-12,10;UBERON:0000091,4.00e-12,10;UBERON:0000087,4.00e-12,10;UBERON:0007010,4.00e-12,10;UBERON:0007806,4.00e-12,10;UBERON:0008780,4.00e-12,10;UBERON:0005728,4.00e-12,10 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.458480434487708,0.410502947249729,1.25937250101887,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0,0.896639238079726,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.67355336034844,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0.816616685019573,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.412210116953756,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,1.07420244868274,0.580066775656914,0.255679882248303,0.267096106940212,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,4.44781693020933,2.47127877893006,2.71497068714184,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.687481272035051,0.717873024576814,0,0,0,0.201550417460179,1.08089965062721,0,0.86661500537946,0.412079291905832,0.741438982396034,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0.471612915298998,0,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.340853619036631,0,0,0,0,0.223710863595585,0.098150233615243,0,0,0,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.22589216407792,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0.99798106963804,0,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.458480434487708,0.410502947249729,1.25937250101887,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0,0.896639238079726,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.67355336034844,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0.816616685019573,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.412210116953756,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,1.07420244868274,0.580066775656914,0.255679882248303,0.267096106940212,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,4.44781693020933,2.47127877893006,2.71497068714184,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.687481272035051,0.717873024576814,0,0,0,0.201550417460179,1.08089965062721,0,0.86661500537946,0.412079291905832,0.741438982396034,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0.471612915298998,0,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.340853619036631,0,0,0,0,0.223710863595585,0.098150233615243,0,0,0,1.1598144313382,0.485710993059139,0.233939463462106,0,0,0.22589216407792,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0.99798106963804,0,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,1.33151354837103,0.201273793591026,0 | ||
|short_description=p@chr10:90743363..90743366,- | |||
}} | }} |
Latest revision as of 16:31, 23 July 2015
Short description: | p@chr10:90743363..90743366, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90743363..90743366, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vagina | 5.85e-14 | 1 |
blood | 7.72e-14 | 15 |
haemolymphatic fluid | 7.72e-14 | 15 |
organism substance | 7.72e-14 | 15 |
umbilical cord | 4.00e-12 | 10 |
blastocyst | 4.00e-12 | 10 |
blastula | 4.00e-12 | 10 |
bilaminar disc | 4.00e-12 | 10 |
inner cell mass | 4.00e-12 | 10 |
cleaving embryo | 4.00e-12 | 10 |
connecting stalk | 4.00e-12 | 10 |
inner cell mass derived epiblast | 4.00e-12 | 10 |
extraembryonic mesoderm | 4.00e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.61e-13 | 1 |
mesenchymal cell neoplasm | 2.12e-07 | 2 |