FFCP PHASE1:Hg19::chr10:99258637..99258751,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:99258637..99258751,+ to FFCP PHASE1:Hg19::chr10:99258637..99258751,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80019 | |EntrezGene=80019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25683 | |HGNC=25683 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAC8 | |UniProt=Q9HAC8 | ||
|association_with_transcript=12bp_to_ENST00000370664_5end | |||
|cluster_id=chr10:99258637..99258751,+ | |||
|description=CAGE_peak_1_at_UBTD1_5end | |||
|id=chr10:99258637..99258751,+ | |||
|ontology_enrichment_celltype=CL:0000220!8.13e-35!246;CL:0002321!9.19e-35!248;CL:0000222!2.84e-34!119;CL:0000055!5.28e-23!180;CL:0000144!8.49e-22!625;CL:0002371!2.60e-21!591;CL:0000548!4.96e-19!679;CL:0000004!4.96e-19!679;CL:0000255!4.96e-19!679;CL:0000183!4.90e-18!59;CL:0000012!8.93e-18!682;CL:0000213!4.09e-17!57;CL:0000215!4.09e-17!57;CL:0002078!7.69e-17!44;CL:0000115!2.64e-16!35;CL:0000192!2.78e-16!42;CL:0000514!2.78e-16!42;CL:0000187!7.24e-16!54;CL:0000680!1.69e-15!57;CL:0000056!1.69e-15!57;CL:0000355!1.69e-15!57;CL:0000359!1.31e-14!32;CL:0002139!3.19e-14!24;CL:0000393!8.30e-14!60;CL:0000211!8.30e-14!60;CL:0000071!4.15e-12!18;CL:0002546!4.15e-12!18;CL:0000066!6.50e-12!254;CL:0000076!3.31e-08!62;CL:0000003!6.04e-08!722;CL:1000449!5.32e-07!16;CL:1000413!5.43e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.89e-14;24!CL:0000115;4.21e-14;36!CL:0000359;8.58e-14;32!CL:0000071;3.95e-12;18!CL:0000192;1.03e-11;43!CL:0002078;1.07e-11;45!CL:0000213;1.89e-10;58!CL:0000215;1.89e-10;58!CL:0000187;2.08e-08;55!CL:1000449;4.02e-07;15!CL:1000413;5.37e-07;9!CL:0000393;7.86e-07;61!CL:0000211;7.86e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.07e-35,250;CL:0000222,8.76e-35,121;CL:0000213,1.42e-17,58;CL:0000215,1.42e-17,58;CL:0002078,2.61e-17,45;CL:0000115,8.91e-17,36;CL:0000192,3.33e-16,43;CL:0000514,3.33e-16,43;CL:0000187,7.68e-16,55;CL:0000680,1.75e-15,58;CL:0000056,1.75e-15,58;CL:0000355,1.75e-15,58;CL:0000359,1.29e-14,32;CL:0002139,3.14e-14,24;CL:0000393,8.20e-14,61;CL:0000211,8.20e-14,61;CL:0000071,4.09e-12,18;CL:0002546,4.09e-12,18;CL:0000066,7.86e-12,253;CL:0000076,1.77e-08,63;CL:1000449,4.14e-07,15;CL:1000413,5.39e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.95e-12;18!CL:0000514;1.03e-11;43!CL:0000222;9.72e-10;121!CL:0000355;5.59e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.21e-28!79;UBERON:0007798!1.21e-28!79;UBERON:0003914!9.28e-26!118;UBERON:0000055!1.68e-25!69;UBERON:0004872!4.34e-25!84;UBERON:0001981!3.33e-23!60;UBERON:0007500!3.33e-23!60;UBERON:0004537!3.33e-23!60;UBERON:0006965!3.33e-23!60;UBERON:0001009!6.77e-23!113;UBERON:0004535!1.33e-22!110;UBERON:0000490!4.04e-19!138;UBERON:0000486!1.49e-18!82;UBERON:0005256!1.77e-18!143;UBERON:0001637!3.50e-18!42;UBERON:0003509!3.50e-18!42;UBERON:0004572!3.50e-18!42;UBERON:0002100!4.72e-18!216;UBERON:0000926!2.24e-17!448;UBERON:0004120!2.24e-17!448;UBERON:0006603!2.24e-17!448;UBERON:0004290!3.71e-17!70;UBERON:0000914!4.00e-17!83;UBERON:0002329!4.00e-17!83;UBERON:0003077!4.00e-17!83;UBERON:0003059!4.00e-17!83;UBERON:0007282!4.00e-17!83;UBERON:0009618!4.00e-17!83;UBERON:0007285!4.00e-17!83;UBERON:0000468!3.14e-16!659;UBERON:0001134!7.87e-16!61;UBERON:0002036!7.87e-16!61;UBERON:0003082!7.87e-16!61;UBERON:0002385!1.85e-14!63;UBERON:0001015!1.85e-14!63;UBERON:0000383!1.85e-14!63;UBERON:0000467!3.58e-14!625;UBERON:0000119!5.03e-14!312;UBERON:0000483!5.37e-14!309;UBERON:0000480!5.57e-14!626;UBERON:0004573!1.97e-13!33;UBERON:0004571!1.97e-13!33;UBERON:0001986!4.15e-12!18;UBERON:0004638!4.15e-12!18;UBERON:0004852!4.15e-12!18;UBERON:0000922!1.94e-11!612;UBERON:0000487!2.23e-11!22;UBERON:0006914!3.59e-11!25;UBERON:0000923!3.82e-11!604;UBERON:0005291!3.82e-11!604;UBERON:0006598!3.82e-11!604;UBERON:0002532!3.82e-11!604;UBERON:0002050!4.25e-11!605;UBERON:0005423!4.25e-11!605;UBERON:0000475!7.24e-11!365;UBERON:0003104!7.85e-11!238;UBERON:0009142!7.85e-11!238;UBERON:0003081!5.48e-10!216;UBERON:0004111!7.61e-10!241;UBERON:0000477!4.86e-09!286;UBERON:0003103!5.53e-09!69;UBERON:0009569!2.50e-08!113;UBERON:0000025!1.69e-07!194;UBERON:0000353!1.70e-07!17;UBERON:0000947!1.75e-07!21;UBERON:0010191!1.75e-07!21;UBERON:0000481!2.91e-07!347;UBERON:0004211!5.32e-07!16;UBERON:0001285!5.32e-07!16;UBERON:0007684!5.32e-07!16;UBERON:0003220!5.32e-07!16;UBERON:0004208!5.32e-07!16;UBERON:0003915!5.43e-07!9;UBERON:0004700!5.43e-07!9;UBERON:0001917!5.43e-07!9;UBERON:0006555!8.75e-07!17;UBERON:0005103!8.75e-07!17;UBERON:0000083!8.75e-07!17;UBERON:0009201!8.75e-07!17;UBERON:0004819!8.75e-07!17;UBERON:0006553!8.75e-07!17;UBERON:0003074!8.75e-07!17;UBERON:0003060!8.75e-07!17;UBERON:0000464!9.04e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.27e-13;56!UBERON:0001981;1.27e-13;56!UBERON:0004537;1.27e-13;56!UBERON:0001637;2.73e-13;42!UBERON:0003509;2.73e-13;42!UBERON:0004572;2.73e-13;42!UBERON:0003914;3.97e-13;74!UBERON:0000055;1.25e-12;65!UBERON:0004573;2.51e-12;33!UBERON:0004571;2.51e-12;33!UBERON:0004638;3.95e-12;18!UBERON:0001986;3.95e-12;18!UBERON:0004852;3.95e-12;18!UBERON:0002049;5.92e-12;75!UBERON:0007798;5.92e-12;75!UBERON:0000487;2.01e-11;22!UBERON:0006914;3.33e-11;25!UBERON:0000490;7.36e-10;33!UBERON:0000025;9.41e-09;93!UBERON:0000947;1.72e-07;21!UBERON:0010191;1.72e-07;21!UBERON:0000353;2.71e-07;15!UBERON:0006555;4.02e-07;15!UBERON:0004819;4.02e-07;15!UBERON:0001285;4.02e-07;15!UBERON:0007684;4.02e-07;15!UBERON:0001009;5.09e-07;112!UBERON:0004535;5.10e-07;109!UBERON:0003915;5.37e-07;9!UBERON:0004700;5.37e-07;9!UBERON:0001917;5.37e-07;9!UBERON:0000119;8.10e-07;139 | |||
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| ||
|short_description=p1@UBTD1 | |||
}} | }} |
Latest revision as of 06:37, 20 September 2015
Short description: | p1@UBTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000370664_5end |
EntrezGene: | UBTD1 |
HGNC: | 25683 |
UniProt: | Q9HAC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.07e-35 | 250 |
mesodermal cell | 8.76e-35 | 121 |
lining cell | 1.42e-17 | 58 |
barrier cell | 1.42e-17 | 58 |
meso-epithelial cell | 2.61e-17 | 45 |
endothelial cell | 8.91e-17 | 36 |
smooth muscle cell | 3.33e-16 | 43 |
smooth muscle myoblast | 3.33e-16 | 43 |
muscle cell | 7.68e-16 | 55 |
muscle precursor cell | 1.75e-15 | 58 |
myoblast | 1.75e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-15 | 58 |
vascular associated smooth muscle cell | 1.29e-14 | 32 |
endothelial cell of vascular tree | 3.14e-14 | 24 |
electrically responsive cell | 8.20e-14 | 61 |
electrically active cell | 8.20e-14 | 61 |
blood vessel endothelial cell | 4.09e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.09e-12 | 18 |
epithelial cell | 7.86e-12 | 253 |
squamous epithelial cell | 1.77e-08 | 63 |
epithelial cell of nephron | 4.14e-07 | 15 |
endothelial cell of artery | 5.39e-07 | 9 |