FFCP PHASE1:Hg19::chr11:10590144..10590159,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:10590144..10590159,- to FFCP PHASE1:Hg19::chr11:10590144..10590159,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10894 | |EntrezGene=10894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14687 | |HGNC=14687 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z296 | |UniProt=F2Z296 | ||
|association_with_transcript=-20bp_to_ENST00000529598_5end | |||
|cluster_id=chr11:10590144..10590159,- | |||
|coexpression_cluster_id=C2091 | |||
|description=CAGE_peak_3_at_LYVE1_5end | |||
|id=chr11:10590144..10590159,- | |||
|ontology_enrichment_celltype=CL:0000115!2.06e-17!35;CL:0002139!1.14e-15!24;CL:0002078!4.50e-12!44;CL:0000071!1.33e-10!18;CL:0002546!1.33e-10!18;CL:0000213!1.52e-07!57;CL:0000215!1.52e-07!57;CL:0005020!7.21e-07!6;CL:0002138!7.21e-07!6;CL:0005022!7.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-12;36!CL:0002139;2.25e-11;24!CL:0000071;1.79e-09;18!CL:0002543;3.65e-07;6!CL:0002078;5.02e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.64e-15,36;CL:0002139,2.29e-11,24;CL:0002078,8.97e-11,45;CL:0000071,1.82e-09,18;CL:0002546,1.82e-09,18;CL:0002543,3.73e-07,6;CL:0000213,4.02e-07,58;CL:0000215,4.02e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-09;18!UBERON:0004872;2.97e-09;7!UBERON:0006603;9.94e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-62!115;UBERON:0004111!1.15e-24!241;UBERON:0001049!1.24e-24!57;UBERON:0005068!1.24e-24!57;UBERON:0006241!1.24e-24!57;UBERON:0007135!1.24e-24!57;UBERON:0000025!8.49e-23!194;UBERON:0000477!1.77e-22!286;UBERON:0002616!6.85e-22!59;UBERON:0003080!1.27e-18!42;UBERON:0003075!2.16e-18!86;UBERON:0007284!2.16e-18!86;UBERON:0002780!1.18e-17!41;UBERON:0001890!1.18e-17!41;UBERON:0006240!1.18e-17!41;UBERON:0000955!2.02e-17!69;UBERON:0006238!2.02e-17!69;UBERON:0001017!2.64e-17!82;UBERON:0002346!6.70e-17!90;UBERON:0005743!7.72e-17!86;UBERON:0002020!1.35e-15!34;UBERON:0003528!1.35e-15!34;UBERON:0001893!1.51e-15!34;UBERON:0002791!6.16e-15!33;UBERON:0001869!3.42e-14!32;UBERON:0000073!6.52e-14!94;UBERON:0001016!6.52e-14!94;UBERON:0000119!2.22e-13!312;UBERON:0000483!7.28e-13!309;UBERON:0002619!1.10e-11!22;UBERON:0003056!8.43e-11!61;UBERON:0001986!1.33e-10!18;UBERON:0004638!1.33e-10!18;UBERON:0004852!1.33e-10!18;UBERON:0001950!2.94e-10!20;UBERON:0000956!1.01e-09!25;UBERON:0000203!1.01e-09!25;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0000467!3.00e-09!625;UBERON:0000480!3.61e-09!626;UBERON:0000468!4.59e-09!659;UBERON:0000033!8.55e-09!123;UBERON:0000481!5.24e-08!347;UBERON:0000487!6.39e-08!22;UBERON:0002420!6.95e-08!9;UBERON:0007245!6.95e-08!9;UBERON:0010009!6.95e-08!9;UBERON:0010011!6.95e-08!9;UBERON:0000454!6.95e-08!9;UBERON:0002308!7.16e-08!9;UBERON:0000125!7.16e-08!9;UBERON:0002298!7.73e-08!8;UBERON:0003103!3.10e-07!69;UBERON:0003076!3.32e-07!15;UBERON:0003057!3.32e-07!15;UBERON:0000055!4.02e-07!69;UBERON:0004872!5.85e-07!84;UBERON:0001871!7.88e-07!7;UBERON:0002465!9.90e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.09e-12;114!UBERON:0004638;1.79e-09;18!UBERON:0001986;1.79e-09;18!UBERON:0004852;1.79e-09;18!UBERON:0000487;2.93e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.49e-47,114;UBERON:0004111,1.06e-11,240;UBERON:0000025,4.78e-11,192;UBERON:0004638,1.82e-09,18;UBERON:0001986,1.82e-09,18;UBERON:0004852,1.82e-09,18;UBERON:0003103,1.66e-07,68;UBERON:0000487,2.97e-07,22;UBERON:0003887,6.22e-07,12;UBERON:0004872,8.17e-07,83 | |||
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| ||
|short_description=p3@LYVE1 | |||
}} | }} |
Latest revision as of 21:38, 24 September 2015
Short description: | p3@LYVE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LYVE1_5end |
Coexpression cluster: | C2091_Hepatic_spleen_Endothelial_lung_lymph_adipose_acute |
Association with transcript: | -20bp_to_ENST00000529598_5end |
EntrezGene: | LYVE1 |
HGNC: | 14687 |
UniProt: | F2Z296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.64e-15 | 36 |
endothelial cell of vascular tree | 2.29e-11 | 24 |
meso-epithelial cell | 8.97e-11 | 45 |
blood vessel endothelial cell | 1.82e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.82e-09 | 18 |
vein endothelial cell | 3.73e-07 | 6 |
lining cell | 4.02e-07 | 58 |
barrier cell | 4.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.49e-47 | 114 |
anatomical conduit | 1.06e-11 | 240 |
tube | 4.78e-11 | 192 |
blood vessel endothelium | 1.82e-09 | 18 |
endothelium | 1.82e-09 | 18 |
cardiovascular system endothelium | 1.82e-09 | 18 |
compound organ | 1.66e-07 | 68 |
simple squamous epithelium | 2.97e-07 | 22 |
intraembryonic coelom | 6.22e-07 | 12 |
splanchnic layer of lateral plate mesoderm | 8.17e-07 | 83 |