FFCP PHASE1:Hg19::chr11:117075077..117075102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117075077..117075102,- to FFCP PHASE1:Hg19::chr11:117075077..117075102,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:117075077..117075102,- | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_at_chr11:117075077..117075102,- | |||
|id=chr11:117075077..117075102,- | |||
|ontology_enrichment_celltype=CL:0000055!8.23e-33!180;CL:0000680!3.65e-20!57;CL:0000056!3.65e-20!57;CL:0000355!3.65e-20!57;CL:0000192!3.15e-19!42;CL:0000514!3.15e-19!42;CL:0000187!8.17e-19!54;CL:0000183!2.20e-18!59;CL:0000359!5.02e-18!32;CL:0000393!1.80e-17!60;CL:0000211!1.80e-17!60;CL:0000057!1.85e-14!75;CL:0000222!2.67e-09!119;CL:0000048!5.63e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.57e-23;32!CL:0000192;1.70e-12;43!CL:0002539;6.25e-08;10!CL:0000057;4.39e-07;73!CL:0000187;5.91e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.74e-24,32;CL:0000192,4.05e-17,43;CL:0000514,4.05e-17,43;CL:0000057,9.02e-17,76;CL:0000680,2.26e-13,58;CL:0000056,2.26e-13,58;CL:0000355,2.26e-13,58;CL:0000187,1.59e-12,55;CL:0000393,1.85e-10,61;CL:0000211,1.85e-10,61;CL:0000048,3.61e-09,427;CL:0000723,1.11e-08,433;CL:0000034,4.68e-08,441;CL:0002539,5.05e-08,10;CL:0000136,6.95e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.70e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.28e-19!63;UBERON:0001015!3.28e-19!63;UBERON:0000383!3.28e-19!63;UBERON:0001134!2.47e-18!61;UBERON:0002036!2.47e-18!61;UBERON:0003082!2.47e-18!61;UBERON:0000914!1.08e-17!83;UBERON:0002329!1.08e-17!83;UBERON:0003077!1.08e-17!83;UBERON:0003059!1.08e-17!83;UBERON:0007282!1.08e-17!83;UBERON:0009618!1.08e-17!83;UBERON:0007285!1.08e-17!83;UBERON:0000486!2.51e-17!82;UBERON:0004290!2.53e-17!70;UBERON:0005256!1.28e-15!143;UBERON:0001637!2.98e-13!42;UBERON:0003509!2.98e-13!42;UBERON:0004572!2.98e-13!42;UBERON:0004872!7.31e-12!84;UBERON:0002100!1.38e-11!216;UBERON:0004573!1.41e-11!33;UBERON:0004571!1.41e-11!33;UBERON:0002049!1.41e-10!79;UBERON:0007798!1.41e-10!79;UBERON:0001981!7.95e-10!60;UBERON:0007500!7.95e-10!60;UBERON:0004537!7.95e-10!60;UBERON:0006965!7.95e-10!60;UBERON:0003914!6.32e-09!118;UBERON:0000055!1.71e-08!69;UBERON:0004535!6.28e-08!110;UBERON:0001009!1.19e-07!113;UBERON:0000468!1.20e-07!659;UBERON:0001135!1.71e-07!15;UBERON:0000475!2.92e-07!365;UBERON:0000490!3.83e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.43e-13;33!UBERON:0004571;2.43e-13;33!UBERON:0001637;1.05e-12;42!UBERON:0003509;1.05e-12;42!UBERON:0004572;1.05e-12;42!UBERON:0003688;5.03e-09;6!UBERON:0002358;5.03e-09;6!UBERON:0003684;5.03e-09;6!UBERON:0001178;5.03e-09;6!UBERON:0007500;1.60e-08;56!UBERON:0001981;1.60e-08;56!UBERON:0004537;1.60e-08;56!UBERON:0004237;6.25e-08;10!UBERON:0004695;6.25e-08;10!UBERON:0002111;6.25e-08;10!UBERON:0004178;6.25e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.36e-19,42;UBERON:0003509,7.36e-19,42;UBERON:0004572,7.36e-19,42;UBERON:0004573,3.66e-15,33;UBERON:0004571,3.66e-15,33;UBERON:0007500,7.77e-14,59;UBERON:0001981,7.77e-14,59;UBERON:0004537,7.77e-14,59;UBERON:0006965,7.77e-14,59;UBERON:0004872,1.05e-13,83;UBERON:0002049,2.33e-13,78;UBERON:0007798,2.33e-13,78;UBERON:0007524,1.34e-12,73;UBERON:0002385,2.21e-12,64;UBERON:0001015,2.21e-12,64;UBERON:0000383,2.21e-12,64;UBERON:0002329,4.09e-12,71;UBERON:0003059,4.09e-12,71;UBERON:0007282,4.09e-12,71;UBERON:0004290,4.09e-12,71;UBERON:0009618,4.09e-12,71;UBERON:0007503,5.70e-12,78;UBERON:0001134,6.45e-12,62;UBERON:0002036,6.45e-12,62;UBERON:0003082,6.45e-12,62;UBERON:0003077,8.27e-12,72;UBERON:0007285,8.27e-12,72;UBERON:0000055,1.19e-11,68;UBERON:0003914,1.41e-10,117;UBERON:0004535,1.50e-10,109;UBERON:0005256,1.81e-10,122;UBERON:0000486,2.24e-10,83;UBERON:0001009,5.89e-10,112;UBERON:0003688,5.87e-09,6;UBERON:0002358,5.87e-09,6;UBERON:0003684,5.87e-09,6;UBERON:0001178,5.87e-09,6;UBERON:0002100,2.35e-08,199;UBERON:0003104,3.66e-08,160;UBERON:0009142,3.66e-08,160;UBERON:0004237,5.05e-08,10;UBERON:0004695,5.05e-08,10;UBERON:0002111,5.05e-08,10;UBERON:0004178,5.05e-08,10 | |||
|phase1_expression=7.63049192936338,6.20891519283851,6.06103937612676,13.009528785907,14.3027550216732,31.4041868676133,12.6649939084155,0,0,1.72013755551056,4.88460817580699,1.09220686065086,1.05506791291381,0.123766352960047,0,6.72325146451775,7.23233433628772,10.2243412654232,5.85519358548608,0.246242116153576,1.02000345622126,4.38836610069323,0.85870796139317,0.547497700291537,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.30152611318355,1.0843174571537,5.0133791063589,0.579386075843295,0,1.45990461090791,1.60709189178915,3.76939975686359,2.28370442802128,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,1.64619665163954,1.19168262731897,1.14734648299525,0.354668382198357,7.8494864019923,3.20246987189115,4.9333509683432,0,1.48181739276657,0.653847612453835,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,1.18800285728205,5.19260551484969,0.910161361938026,2.15585442544872,0,0.125118519871964,0,3.07284334616587,8.27517048657353,3.75595147266492,1.47461838108027,3.22901344239952,2.56268866582281,2.11931901159562,2.70081986475962,0.721367704669072,3.09168648054755,2.04728541964749,1.0126579934476,1.75386609290158,4.03894038790583,2.02509777013059,0.161646056818812,5.68015348026583,2.61955455391865,2.54340888465731,0.193260853163297,0,0.286804595389004,0,0.265059536642971,0.116193942869518,0,0.252320850875628,0.36497735907583,4.69348596989448,5.78916844373597,2.76269842704961,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,5.60967095213783,2.4694440679884,5.88034845542168,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.4400297149257,1.29271715757778,0,0.845302752556,6.64845291462176,5.2003718455683,0.257207374262142,2.83698264046557,0,0.142977993658148,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0.301439377059586,2.61460037580088,2.19940580600526,0,0,0,5.5113716763064,3.44585807502342,0,2.89562613335158,1.02738161275192,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,9.35868876888632,6.42344359669782,3.94256037584837,2.92853537481783,3.00946099727719,2.27407504055985,0,0.664225598535437,12.5371034608358,0.0868836144680828,0,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,2.97729369382532,5.37116906508219,11.7877239661891,1.28139149255701,4.60536524160033,11.5814823223397,13.3576259800492,0.616838775210622,0.710246901252508,0.164254312027618,0,2.09178681227927,0,0,0,1.03333003348146,0.910455840033585,0.917870904715969,0.451199612907412,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,3.01013864312912,0,0,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,4.82051789532479,0.193341436584244,0.308097234229289,0.307007349452259,0.275673144969061,0,0.725083469571143,0.0852266274161009,0.623224249527161,0.165284915360978,0.768760269460425,0.127612712494584,0.2023155617111,3.253918845081,2.51849877464512,0.6970372701606,0,1.59691809095107,2.60979897622522,2.22389062924704,5.72499546967965,0.744316738719335,3.48017367190598,5.3376454298671,0.767693373934002,0,0.636406495851874,3.13979456079692,0.539617372749944,0.274537029736055,0.353437207037059,1.41527737101321,12.6808256938407,3.37006764991185,0.48763373908959,2.43713489631284,5.28250733783777,1.09199929126389,0.424216295861138,2.26016233240486,1.65409603063837,3.3171948762061,4.38450885253763,0,0.655894752046633,5.68149055495571,6.50629346009475,5.91560765317707,0,1.47373561519682,5.7067368237,0.709522128141196,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0.43050537267123,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,0,0,5.77819165928102,0,0,0.20453736500431,0,10.8863855681633,0,0,0,1.97286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,1.30815439456455,0.569710279235006,0,0,0,0,3.29751336246704,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.707660516026713,3.05515072466813,0,0,0,0,0,0,0,0,0,0.789168805698781,6.04953580243319,0,0.568679216656392,0,0,0,0,0,0,0,0.416024019039416,0,0,0,2.62090002363045,0,0,0,0.0821154570532092,1.74580229679155,0.176512253383001,0,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0.916641696046735,0,0.399358000997982,0,0,0,15.8531948758658,0,0,0.08241585838116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| ||
|short_description=p@chr11:117075077..117075102,- | |||
}} | }} |
Latest revision as of 18:33, 23 July 2015
Short description: | p@chr11:117075077..117075102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117075077..117075102, - |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.74e-24 | 32 |
smooth muscle cell | 4.05e-17 | 43 |
smooth muscle myoblast | 4.05e-17 | 43 |
fibroblast | 9.02e-17 | 76 |
muscle precursor cell | 2.26e-13 | 58 |
myoblast | 2.26e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.26e-13 | 58 |
muscle cell | 1.59e-12 | 55 |
electrically responsive cell | 1.85e-10 | 61 |
electrically active cell | 1.85e-10 | 61 |
multi fate stem cell | 3.61e-09 | 427 |
somatic stem cell | 1.11e-08 | 433 |
stem cell | 4.68e-08 | 441 |
aortic smooth muscle cell | 5.05e-08 | 10 |
fat cell | 6.95e-07 | 15 |